RNA–Protein interactions for RNA: ENST00000456983.1

COL21A1-204, Transcript of collagen type XXI alpha 1 chain, human

TSL 3

Gene COL21A1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL21A1-204	ENST00000456983	ADORA1	P30542	326 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	DSC3	Q14574	896 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	PUM1	Q14671	1186 aa	Known RBP eCLIP	5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	HSP90AB4P	Q58FF6	505 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	TNNI3K	Q59H18	835 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	SOGA3	Q5TF21	947 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	ANKRD45	Q5TZF3	282 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	TSHZ3	Q63HK5	1081 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	NLRX1	Q86UT6	975 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	VGLL2	Q8N8G2	317 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	LINC01599	Q8WXQ3	324 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	KIF1BP	Q96EK5	621 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	DPH2	Q9BQC3	489 aa	Predicted RBP	5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	ASPN	Q9BXN1	380 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	LRRCC1	Q9C099	1032 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	LNPK	Q9C0E8	428 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	ANKRD2	Q9GZV1	360 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	MIR1-1HG	Q9H1L0	117 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	ZNF277	Q9NRM2	450 aa	Predicted RBP	5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	NOP58	Q9Y2X3	529 aa	Known RBP	5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	RIPOR2	Q9Y4F9	1068 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	FPGT-TNNI3K	V9GXZ4	949 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	MYO5A	Q9Y4I1	1855 aa	Known RBP	5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	ZNF804B	A4D1E1	1349 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	KDM2B	Q8NHM5	1336 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	DOCK2	Q92608	1830 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	RBM47	A0AV96	593 aa	Known RBP	5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	WASH4P	A8MWX3	477 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983		K7ESM1	405 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	GFRA2	O00451	464 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	NRDC	O43847	1150 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	RAB11FIP3	O75154	756 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	PDE8B	O95263	885 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	IFIT1	P09914	478 aa	Known RBP	5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	GYG1	P46976	350 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	KCNC1	P48547	511 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	CAP1	Q01518	475 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	TEK	Q02763	1124 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	PTPN11	Q06124	597 aa	Predicted RBP	5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	TSNAXIP1	Q2TAA8	658 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	RASIP1	Q5U651	963 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	CENPQ	Q7L2Z9	268 aa	Predicted RBP	5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	SKAP1	Q86WV1	359 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	VPS37D	Q86XT2	251 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	CLASRP	Q8N2M8	674 aa	Known RBP	5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	TBC1D16	Q8TBP0	767 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	MZB1	Q8WU39	189 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	GCC1	Q96CN9	775 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	NEUROD6	Q96NK8	337 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	EYA3	Q99504	573 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	CCDC8	Q9H0W5	538 aa	Predicted RBP	5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	C12orf49	Q9H741	205 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	DCTPP1	Q9H773	170 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	DBNDD1	Q9H9R9	158 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	POLL	Q9UGP5	575 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	SRRD	Q9UH36	339 aa		5.69	□□□□□ -1.5
COL21A1-204	ENST00000456983	AKAP11	Q9UKA4	1901 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	FRAT2	O75474	233 aa	Predicted RBP	5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	IFIT2	P09913	472 aa	Known RBP	5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	RPL10	P27635	214 aa	Known RBP	5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	MAPK1	P28482	360 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	VIPR1	P32241	457 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	IARS	P41252	1262 aa	Known RBP	5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	MAPK8	P45983	427 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	PHKA1	P46020	1223 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	YBX1	P67809	324 aa	Known RBP	5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	CHAF1A	Q13111	956 aa	Predicted RBP	5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	LAPTM5	Q13571	262 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	TTC39A	Q5SRH9	613 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	GORAB	Q5T7V8	394 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	ZNF804A	Q7Z570	1209 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	SMC5	Q8IY18	1101 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	NIM1K	Q8IY84	436 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	RTKN2	Q8IZC4	609 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	SUPT20H	Q8NEM7	779 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	OTUD7A	Q8TE49	926 aa	Predicted RBP	5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	LPIN2	Q92539	896 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	EAF2	Q96CJ1	260 aa	Predicted RBP	5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	SHISA4	Q96DD7	197 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	GPATCH3	Q96I76	525 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	PODXL2	Q9NZ53	605 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	RNF181	Q9P0P0	153 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	DBNL	Q9UJU6	430 aa	Known RBP	5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	LTBP3	Q9NS15	1303 aa		5.68	□□□□□ -1.5
COL21A1-204	ENST00000456983	CARNS1	A5YM72	827 aa		5.67	□□□□□ -1.5
COL21A1-204	ENST00000456983	ECE2	O60344	883 aa		5.67	□□□□□ -1.5
COL21A1-204	ENST00000456983	USP17L7	P0C7H9	530 aa		5.67	□□□□□ -1.5
COL21A1-204	ENST00000456983	PFKL	P17858	780 aa		5.67	□□□□□ -1.5
COL21A1-204	ENST00000456983	MX1	P20591	662 aa		5.67	□□□□□ -1.5
COL21A1-204	ENST00000456983	FGFR2	P21802	821 aa		5.67	□□□□□ -1.5
COL21A1-204	ENST00000456983	RGS3	P49796	1198 aa		5.67	□□□□□ -1.5
COL21A1-204	ENST00000456983	PCBP3	P57721	371 aa	Known RBP	5.67	□□□□□ -1.5
COL21A1-204	ENST00000456983	TIMM10	P62072	90 aa		5.67	□□□□□ -1.5
COL21A1-204	ENST00000456983	NUCB1	Q02818	461 aa		5.67	□□□□□ -1.5
COL21A1-204	ENST00000456983	UBE4A	Q14139	1066 aa		5.67	□□□□□ -1.5
COL21A1-204	ENST00000456983	CAVIN4	Q5BKX8	364 aa		5.67	□□□□□ -1.5
COL21A1-204	ENST00000456983	UBXN11	Q5T124	520 aa		5.67	□□□□□ -1.5
COL21A1-204	ENST00000456983	ZFYVE27	Q5T4F4	411 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms