RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 C1orf186Q6ZWK4 172 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 ANKRD13CQ8N6S4 541 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 DRC1Q96MC2 740 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 NACC1Q96RE7 527 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 RMDN3Q96TC7 470 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 HAUS4Q9H6D7 363 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 ZNF263O14978 683 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 AKAP3O75969 853 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 GNA14O95837 355 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 SP4Q02446 784 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 COG2Q14746 738 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 TKFCQ3LXA3 575 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 FIGNQ5HY92 759 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 DCAF15Q66K64 600 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 PARVGQ9HBI0 331 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 TCEAL9Q9UHQ7 104 aa12.97□□□□□ -0.33
VTA1-203ENST00000452973 CALUO43852 315 aaPredicted RBP12.96□□□□□ -0.33
VTA1-203ENST00000452973 NR3C1P04150 777 aa12.96□□□□□ -0.33
VTA1-203ENST00000452973 KIF11P52732 1056 aa12.96□□□□□ -0.33
VTA1-203ENST00000452973 BACE1P56817 501 aa12.96□□□□□ -0.33
VTA1-203ENST00000452973 RAPGEF1Q13905 1077 aa12.96□□□□□ -0.33
VTA1-203ENST00000452973 EPHA7Q15375 998 aa12.96□□□□□ -0.33
VTA1-203ENST00000452973 RNF207Q6ZRF8 634 aa12.96□□□□□ -0.33
VTA1-203ENST00000452973 FAM178BQ8IXR5 827 aa12.96□□□□□ -0.33
VTA1-203ENST00000452973 RDH13Q8NBN7 331 aa12.96□□□□□ -0.33
VTA1-203ENST00000452973 IFIH1Q9BYX4 1025 aaKnown RBP12.96□□□□□ -0.33
VTA1-203ENST00000452973 CDC23Q9UJX2 597 aa12.96□□□□□ -0.33
VTA1-203ENST00000452973 SRGAP2O75044 1071 aa12.96□□□□□ -0.33
VTA1-203ENST00000452973 KIF5AQ12840 1032 aa12.96□□□□□ -0.33
VTA1-203ENST00000452973 ITGB3BPQ13352 177 aaPredicted RBP12.96□□□□□ -0.33
VTA1-203ENST00000452973 BAATQ14032 418 aaPredicted RBP12.96□□□□□ -0.33
VTA1-203ENST00000452973 EDRF1Q3B7T1 1238 aa12.96□□□□□ -0.33
VTA1-203ENST00000452973 UTP14CQ5TAP6 766 aaKnown RBP12.96□□□□□ -0.33
VTA1-203ENST00000452973 ARHGEF16Q5VV41 709 aa12.96□□□□□ -0.33
VTA1-203ENST00000452973 CCDC170Q8IYT3 715 aa12.96□□□□□ -0.33
VTA1-203ENST00000452973 ZNF280CQ8ND82 737 aa12.96□□□□□ -0.33
VTA1-203ENST00000452973 BAP1Q92560 729 aa12.96□□□□□ -0.33
VTA1-203ENST00000452973 CCDC43Q96MW1 224 aaKnown RBP12.96□□□□□ -0.33
VTA1-203ENST00000452973 FER1L6Q2WGJ9 1857 aa12.96□□□□□ -0.34
VTA1-203ENST00000452973 EIF3CLB5ME19 914 aaKnown RBP12.95□□□□□ -0.34
VTA1-203ENST00000452973 VWA5AO00534 786 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 XRCC5P13010 732 aaKnown RBP12.95□□□□□ -0.34
VTA1-203ENST00000452973 PTPRAP18433 802 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 SLC9A1P19634 815 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 CHMP4BP1P59074 171 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 GFPT1Q06210 699 aaPredicted RBP12.95□□□□□ -0.34
VTA1-203ENST00000452973 EPM2AIP1Q7L775 607 aaPredicted RBP12.95□□□□□ -0.34
VTA1-203ENST00000452973 SCYL3Q8IZE3 742 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 FBXO41Q8TF61 875 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 ZBTB9Q96C00 473 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 EIF3CQ99613 913 aaKnown RBP12.95□□□□□ -0.34
VTA1-203ENST00000452973 RNF146Q9NTX7 359 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 CD2APQ9Y5K6 639 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 ASTN1O14525 1302 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 PDXKO00764 312 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 ATP9AO75110 1047 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 NOL4O94818 638 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 CYP2J2P51589 502 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 SNRNP48Q6IEG0 339 aaKnown RBP12.95□□□□□ -0.34
VTA1-203ENST00000452973 PPP4R3CPQ6ZMV5 832 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 CAPZA3Q96KX2 299 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.95□□□□□ -0.34
VTA1-203ENST00000452973 TYW1Q9NV66 732 aaKnown RBP12.95□□□□□ -0.34
VTA1-203ENST00000452973 TRAF3IP3Q9Y228 551 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 FAM170AA1A519 330 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 CLCN6P51797 869 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 USP14P54578 494 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 PGM5Q15124 567 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 PDXDC1Q6P996 788 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 SYCP3Q8IZU3 236 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 RIT2Q99578 217 aa12.95□□□□□ -0.34
VTA1-203ENST00000452973 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
VTA1-203ENST00000452973 PEX10O60683 326 aa12.94□□□□□ -0.34
VTA1-203ENST00000452973 USO1O60763 962 aaKnown RBP12.94□□□□□ -0.34
VTA1-203ENST00000452973 HIP1RO75146 1068 aa12.94□□□□□ -0.34
VTA1-203ENST00000452973 ATP1A1P05023 1023 aaKnown RBP12.94□□□□□ -0.34
VTA1-203ENST00000452973 RPL13P26373 211 aaKnown RBP12.94□□□□□ -0.34
VTA1-203ENST00000452973 HOXA7P31268 230 aaPredicted RBP12.94□□□□□ -0.34
VTA1-203ENST00000452973 NAP1L1P55209 391 aaKnown RBP12.94□□□□□ -0.34
VTA1-203ENST00000452973 SFMBT2Q5VUG0 894 aa12.94□□□□□ -0.34
VTA1-203ENST00000452973 PADI6Q6TGC4 694 aa12.94□□□□□ -0.34
VTA1-203ENST00000452973 FAM133AQ8N9E0 248 aa12.94□□□□□ -0.34
VTA1-203ENST00000452973 GOLGA1Q92805 767 aa12.94□□□□□ -0.34
VTA1-203ENST00000452973 AGO4Q9HCK5 861 aaKnown RBP12.94□□□□□ -0.34
VTA1-203ENST00000452973 MYO6Q9UM54 1294 aa12.94□□□□□ -0.34
VTA1-203ENST00000452973 PCDHA13Q9Y5I0 950 aa12.94□□□□□ -0.34
VTA1-203ENST00000452973 KIF13BQ9NQT8 1826 aa12.94□□□□□ -0.34
VTA1-203ENST00000452973 ATAD5Q96QE3 1844 aa12.94□□□□□ -0.34
VTA1-203ENST00000452973 TGFB1I1O43294 461 aa12.94□□□□□ -0.34
VTA1-203ENST00000452973 EPB41P11171 864 aaKnown RBP12.94□□□□□ -0.34
VTA1-203ENST00000452973 GAP43P17677 238 aa12.94□□□□□ -0.34
VTA1-203ENST00000452973 PCNX4Q63HM2 1172 aa12.94□□□□□ -0.34
VTA1-203ENST00000452973 MLXIPQ9HAP2 919 aa12.94□□□□□ -0.34
VTA1-203ENST00000452973 DHX15O43143 795 aaKnown RBP12.93□□□□□ -0.34
VTA1-203ENST00000452973 SEC31AO94979 1220 aaKnown RBP12.93□□□□□ -0.34
VTA1-203ENST00000452973 RHOXF2BP0C7M4 288 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 SRGAP1Q7Z6B7 1085 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 PSMB7Q99436 277 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 RHOXF2Q9BQY4 288 aa12.93□□□□□ -0.34
VTA1-203ENST00000452973 AS3MTQ9HBK9 375 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms