RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 CYP2C19P33261 490 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 OTOP1Q7RTM1 612 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 KSR1Q8IVT5 923 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 AGBL1Q96MI9 1066 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 CEP63Q96MT8 703 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 PSMB7Q99436 277 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 JADE2Q9NQC1 790 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 SALL4Q9UJQ4 1053 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 DDX39AO00148 427 aaKnown RBP13.28□□□□□ -0.28
COL27A1-202ENST00000451716 SLITRK3O94933 977 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 GCNT3O95395 438 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 EGFRP00533 1210 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 CYP3A4P08684 503 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 ARP10275 920 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 ACTN1P12814 892 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 CAP2P40123 477 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 CXCL9Q07325 125 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 LONRF2Q1L5Z9 754 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 CCDC91Q7Z6B0 441 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 MYH10P35580 1976 aa13.28□□□□□ -0.28
COL27A1-202ENST00000451716 WNT10BO00744 389 aa13.27□□□□□ -0.28
COL27A1-202ENST00000451716 CETN3O15182 167 aa13.27□□□□□ -0.28
COL27A1-202ENST00000451716 EPS15P42566 896 aa13.27□□□□□ -0.28
COL27A1-202ENST00000451716 VSNL1P62760 191 aa13.27□□□□□ -0.28
COL27A1-202ENST00000451716 KCNH2Q12809 1159 aa13.27□□□□□ -0.28
COL27A1-202ENST00000451716 TUBB2AQ13885 445 aa13.27□□□□□ -0.28
COL27A1-202ENST00000451716 KNOP1Q1ED39 458 aaKnown RBP13.27□□□□□ -0.28
COL27A1-202ENST00000451716 HGSNATQ68CP4 663 aa13.27□□□□□ -0.28
COL27A1-202ENST00000451716 MCTP2Q6DN12 878 aa13.27□□□□□ -0.28
COL27A1-202ENST00000451716 LDHDQ86WU2 507 aa13.27□□□□□ -0.28
COL27A1-202ENST00000451716 CHURC1Q8WUH1 139 aa13.27□□□□□ -0.28
COL27A1-202ENST00000451716 HINFPQ9BQA5 517 aa13.27□□□□□ -0.28
COL27A1-202ENST00000451716 TUBB2BQ9BVA1 445 aa13.27□□□□□ -0.28
COL27A1-202ENST00000451716 RANBP17Q9H2T7 1088 aaKnown RBP13.27□□□□□ -0.28
COL27A1-202ENST00000451716 WRAP73Q9P2S5 460 aaPredicted RBP13.27□□□□□ -0.28
COL27A1-202ENST00000451716 INPP5BP32019 993 aa13.27□□□□□ -0.29
COL27A1-202ENST00000451716 CASP4P49662 377 aa13.27□□□□□ -0.29
COL27A1-202ENST00000451716 RASSF7Q02833 373 aa13.27□□□□□ -0.29
COL27A1-202ENST00000451716 RINT1Q6NUQ1 792 aa13.27□□□□□ -0.29
COL27A1-202ENST00000451716 NIM1KQ8IY84 436 aa13.27□□□□□ -0.29
COL27A1-202ENST00000451716 ITFG2Q969R8 447 aa13.27□□□□□ -0.29
COL27A1-202ENST00000451716 HSD17B14Q9BPX1 270 aa13.27□□□□□ -0.29
COL27A1-202ENST00000451716 ZNF341Q9BYN7 854 aa13.27□□□□□ -0.29
COL27A1-202ENST00000451716 ZNRF3Q9ULT6 936 aa13.27□□□□□ -0.29
COL27A1-202ENST00000451716 PDE2AO00408 941 aaPredicted RBP13.26□□□□□ -0.29
COL27A1-202ENST00000451716 POLR3GO15318 223 aaPredicted RBP13.26□□□□□ -0.29
COL27A1-202ENST00000451716 GAS7O60861 476 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 TBCAO75347 108 aaKnown RBP13.26□□□□□ -0.29
COL27A1-202ENST00000451716 PSMD10O75832 226 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 NMT1P30419 496 aaKnown RBP13.26□□□□□ -0.29
COL27A1-202ENST00000451716 MAGEA1P43355 309 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 ZC2HC1CQ53FD0 456 aaPredicted RBP13.26□□□□□ -0.29
COL27A1-202ENST00000451716 DCAF17Q5H9S7 520 aaPredicted RBP13.26□□□□□ -0.29
COL27A1-202ENST00000451716 PAPD7Q5XG87 772 aaKnown RBP13.26□□□□□ -0.29
COL27A1-202ENST00000451716 CPXCR1Q8N123 301 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 PURBQ96QR8 312 aaKnown RBP13.26□□□□□ -0.29
COL27A1-202ENST00000451716 FUT8Q9BYC5 575 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 ZCCHC17Q9NP64 241 aaKnown RBP13.26□□□□□ -0.29
COL27A1-202ENST00000451716 BUB1O43683 1085 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 AKAP3O75969 853 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 EYA4O95677 639 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 SLC9A1P19634 815 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 RAPGEF1Q13905 1077 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 TCERG1LQ5VWI1 586 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 ZNF662Q6ZS27 426 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 TRMT1LQ7Z2T5 733 aaKnown RBP13.26□□□□□ -0.29
COL27A1-202ENST00000451716 RPAINQ86UA6 219 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 FAM133AQ8N9E0 248 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 EHBP1Q8NDI1 1231 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 POLR3CQ9BUI4 534 aaPredicted RBP13.26□□□□□ -0.29
COL27A1-202ENST00000451716 SH2D4AQ9H788 454 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 ABCB6Q9NP58 842 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 HOMER2Q9NSB8 354 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 CEP72Q9P209 647 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 COL2A1P02458 1487 aaPredicted RBP13.26□□□□□ -0.29
COL27A1-202ENST00000451716 CCDC151A5D8V7 595 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 USO1O60763 962 aaKnown RBP13.26□□□□□ -0.29
COL27A1-202ENST00000451716 GNA14O95837 355 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 CXCR5P32302 372 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 CEP55Q53EZ4 464 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 ZC3H12AQ5D1E8 599 aaKnown RBP13.26□□□□□ -0.29
COL27A1-202ENST00000451716 SFMBT2Q5VUG0 894 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 FOXR2Q6PJQ5 311 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 EPM2AIP1Q7L775 607 aaPredicted RBP13.26□□□□□ -0.29
COL27A1-202ENST00000451716 MYCT1Q8N699 235 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 IQCDQ96DY2 449 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 ZNF577Q9BSK1 485 aa13.26□□□□□ -0.29
COL27A1-202ENST00000451716 NFIBO00712 420 aa13.25□□□□□ -0.29
COL27A1-202ENST00000451716 ZMYND10O75800 440 aa13.25□□□□□ -0.29
COL27A1-202ENST00000451716 ASTE1Q2TB18 679 aaPredicted RBP13.25□□□□□ -0.29
COL27A1-202ENST00000451716 EDRF1Q3B7T1 1238 aa13.25□□□□□ -0.29
COL27A1-202ENST00000451716 DNAAF5Q86Y56 855 aa13.25□□□□□ -0.29
COL27A1-202ENST00000451716 MSANTD4Q8NCY6 345 aa13.25□□□□□ -0.29
COL27A1-202ENST00000451716 CAGE1Q8TC20 777 aa13.25□□□□□ -0.29
COL27A1-202ENST00000451716 UNC45AQ9H3U1 944 aa13.25□□□□□ -0.29
COL27A1-202ENST00000451716 SMARCAL1Q9NZC9 954 aa13.25□□□□□ -0.29
COL27A1-202ENST00000451716 ARMCX3Q9UH62 379 aaPredicted RBP13.25□□□□□ -0.29
COL27A1-202ENST00000451716 MRPL11Q9Y3B7 192 aaKnown RBP13.25□□□□□ -0.29
COL27A1-202ENST00000451716 PCDHB13Q9Y5F0 798 aa13.25□□□□□ -0.29
COL27A1-202ENST00000451716 ASTN1O14525 1302 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms