RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 VAV3Q9UKW4 847 aa14.7□□□□□ -0.06
SNRNP27-203ENST00000450162 P4HBP07237 508 aaKnown RBP14.69□□□□□ -0.06
SNRNP27-203ENST00000450162 CKBP12277 381 aa14.69□□□□□ -0.06
SNRNP27-203ENST00000450162 ATP2B1P20020 1258 aa14.69□□□□□ -0.06
SNRNP27-203ENST00000450162 CCL23P55773 120 aa14.69□□□□□ -0.06
SNRNP27-203ENST00000450162 PSMC5P62195 406 aa14.69□□□□□ -0.06
SNRNP27-203ENST00000450162 HIC1Q14526 733 aa14.69□□□□□ -0.06
SNRNP27-203ENST00000450162 EPHA7Q15375 998 aa14.69□□□□□ -0.06
SNRNP27-203ENST00000450162 TRIM71Q2Q1W2 868 aaKnown RBP14.69□□□□□ -0.06
SNRNP27-203ENST00000450162 XKR3Q5GH77 459 aa14.69□□□□□ -0.06
SNRNP27-203ENST00000450162 BRAPQ7Z569 592 aa14.69□□□□□ -0.06
SNRNP27-203ENST00000450162 ZNF710Q8N1W2 664 aa14.69□□□□□ -0.06
SNRNP27-203ENST00000450162 DHX38Q92620 1227 aaKnown RBP14.69□□□□□ -0.06
SNRNP27-203ENST00000450162 GJA10Q969M2 543 aa14.69□□□□□ -0.06
SNRNP27-203ENST00000450162 WNT8AQ9H1J5 351 aa14.69□□□□□ -0.06
SNRNP27-203ENST00000450162 TTC12Q9H892 705 aaPredicted RBP14.69□□□□□ -0.06
SNRNP27-203ENST00000450162 PCDHA2Q9Y5H9 948 aa14.69□□□□□ -0.06
SNRNP27-203ENST00000450162 MAGEB2O15479 319 aa14.68□□□□□ -0.06
SNRNP27-203ENST00000450162 HSP90AA1P07900 732 aaKnown RBP14.68□□□□□ -0.06
SNRNP27-203ENST00000450162 ATP4AP20648 1035 aa14.68□□□□□ -0.06
SNRNP27-203ENST00000450162 TXKP42681 527 aa14.68□□□□□ -0.06
SNRNP27-203ENST00000450162 QARSP47897 775 aaKnown RBP14.68□□□□□ -0.06
SNRNP27-203ENST00000450162 SPIRE1Q08AE8 756 aa14.68□□□□□ -0.06
SNRNP27-203ENST00000450162 ZNF174Q15697 407 aa14.68□□□□□ -0.06
SNRNP27-203ENST00000450162 HABP4Q5JVS0 413 aaKnown RBP14.68□□□□□ -0.06
SNRNP27-203ENST00000450162 MARCH8Q5T0T0 291 aa14.68□□□□□ -0.06
SNRNP27-203ENST00000450162 FAM43BQ6ZT52 329 aaPredicted RBP14.68□□□□□ -0.06
SNRNP27-203ENST00000450162 LRRC8DQ7L1W4 858 aa14.68□□□□□ -0.06
SNRNP27-203ENST00000450162 NME8Q8N427 588 aa14.68□□□□□ -0.06
SNRNP27-203ENST00000450162 NEK9Q8TD19 979 aa14.68□□□□□ -0.06
SNRNP27-203ENST00000450162 MTIF3Q9H2K0 278 aaKnown RBP14.68□□□□□ -0.06
SNRNP27-203ENST00000450162 PPME1Q9Y570 386 aa14.68□□□□□ -0.06
SNRNP27-203ENST00000450162 STK24Q9Y6E0 443 aa14.68□□□□□ -0.06
SNRNP27-203ENST00000450162 UMODL1Q5DID0 1318 aa14.67□□□□□ -0.06
SNRNP27-203ENST00000450162 LTBP2Q14767 1821 aa14.67□□□□□ -0.06
SNRNP27-203ENST00000450162 SMIM35A0A1B0GVV1 85 aa14.67□□□□□ -0.06
SNRNP27-203ENST00000450162 RSPH10B2B2RC85 870 aa14.67□□□□□ -0.06
SNRNP27-203ENST00000450162 FGBP02675 491 aa14.67□□□□□ -0.06
SNRNP27-203ENST00000450162 OATP04181 439 aa14.67□□□□□ -0.06
SNRNP27-203ENST00000450162 OR52Z1P0C646 297 aa14.67□□□□□ -0.06
SNRNP27-203ENST00000450162 RSPH10BP0C881 870 aa14.67□□□□□ -0.06
SNRNP27-203ENST00000450162 SYT1P21579 422 aa14.67□□□□□ -0.06
SNRNP27-203ENST00000450162 THPOP40225 353 aa14.67□□□□□ -0.06
SNRNP27-203ENST00000450162 TMEM266Q2M3C6 531 aa14.67□□□□□ -0.06
SNRNP27-203ENST00000450162 LRIT3Q3SXY7 679 aa14.67□□□□□ -0.06
SNRNP27-203ENST00000450162 FAM26DQ5JW98 314 aa14.67□□□□□ -0.06
SNRNP27-203ENST00000450162 ZNF618Q5T7W0 954 aa14.67□□□□□ -0.06
SNRNP27-203ENST00000450162 C4orf19Q8IY42 314 aa14.67□□□□□ -0.06
SNRNP27-203ENST00000450162 EXOC8Q8IYI6 725 aa14.67□□□□□ -0.06
SNRNP27-203ENST00000450162 NIFKQ9BYG3 293 aaKnown RBP14.67□□□□□ -0.06
SNRNP27-203ENST00000450162 RAB34Q9BZG1 259 aa14.67□□□□□ -0.06
SNRNP27-203ENST00000450162 KAT6AQ92794 2004 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 EML1O00423 815 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 WNT7AO00755 349 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 ZNF862O60290 1169 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 BMP15O95972 392 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 ACTN1P12814 892 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 KLRC1P26715 233 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 TMOD1P28289 359 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 PRPHP41219 470 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 TOB1P50616 345 aaPredicted RBP14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 IGBP1P78318 339 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 PRKCEQ02156 737 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 PDIA5Q14554 519 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 TMEM240Q5SV17 173 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 IER5Q5VY09 327 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 NCAPH2Q6IBW4 605 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 MTHFD1LQ6UB35 978 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 OTUD6AQ7L8S5 288 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 SCLYQ96I15 445 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 TMEM60Q9H2L4 133 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 ZSWIM4Q9H7M6 989 aa14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.66□□□□□ -0.06
SNRNP27-203ENST00000450162 VPS37CA5D8V6 355 aaPredicted RBP14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 LYPLA2O95372 231 aa14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 CXCL10P02778 98 aa14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 MUTP22033 750 aa14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 FXR2P51116 673 aaKnown RBP eCLIP14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 EPHB4P54760 987 aa14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 CDC42EP1Q00587 391 aa14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 PTGDRQ13258 359 aa14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 SHHQ15465 462 aa14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 ZNF365Q70YC5 407 aa14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 C16orf59Q7L2K0 433 aa14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 C4orf32Q8N8J7 132 aa14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 ERMNQ8TAM6 284 aa14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 HERVK_113Q902F9 699 aa14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 WNT8BQ93098 351 aa14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 HSD17B14Q9BPX1 270 aa14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 JPH2Q9BR39 696 aaPredicted RBP14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.65□□□□□ -0.061e-8■■□□□ 13.2
SNRNP27-203ENST00000450162 ZSCAN16Q9H4T2 348 aaPredicted RBP14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 PCDHB6Q9Y5E3 794 aa14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 SQORQ9Y6N5 450 aa14.65□□□□□ -0.06
SNRNP27-203ENST00000450162 DDX11L8A8MPP1 907 aa14.64□□□□□ -0.07
SNRNP27-203ENST00000450162 ZBTB42B2RXF5 422 aa14.64□□□□□ -0.07
SNRNP27-203ENST00000450162 M0QZ92 97 aa14.64□□□□□ -0.07
SNRNP27-203ENST00000450162 STX6O43752 255 aa14.64□□□□□ -0.07
SNRNP27-203ENST00000450162 EFCAB14O75071 495 aa14.64□□□□□ -0.07
SNRNP27-203ENST00000450162 BAIAP3O94812 1187 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms