RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 MAGI1Q96QZ7 1491 aaPredicted RBP12.43□□□□□ -0.42
SHANK2-211ENST00000449833 TAC1P20366 129 aa12.43□□□□□ -0.42
SHANK2-211ENST00000449833 CDC27P30260 824 aa12.43□□□□□ -0.42
SHANK2-211ENST00000449833 NUP62P37198 522 aaPredicted RBP12.43□□□□□ -0.42
SHANK2-211ENST00000449833 ARMC3Q5W041 872 aa12.43□□□□□ -0.42
SHANK2-211ENST00000449833 ACAD11Q709F0 780 aa12.43□□□□□ -0.42
SHANK2-211ENST00000449833 RSPH1Q8WYR4 309 aa12.43□□□□□ -0.42
SHANK2-211ENST00000449833 APOBEC2Q9Y235 224 aaKnown RBP12.43□□□□□ -0.42
SHANK2-211ENST00000449833 PARP3Q9Y6F1 533 aa12.43□□□□□ -0.42
SHANK2-211ENST00000449833 GCC2Q8IWJ2 1684 aa12.43□□□□□ -0.42
SHANK2-211ENST00000449833 KRT16P08779 473 aa12.43□□□□□ -0.42
SHANK2-211ENST00000449833 PMLP29590 882 aa12.43□□□□□ -0.42
SHANK2-211ENST00000449833 ARMCX4Q5H9R4 360 aa12.43□□□□□ -0.42
SHANK2-211ENST00000449833 ZBTB8OSQ8IWT0 167 aa12.43□□□□□ -0.42
SHANK2-211ENST00000449833 ATP11CQ8NB49 1132 aa12.43□□□□□ -0.42
SHANK2-211ENST00000449833 SEPT1Q8WYJ6 367 aa12.43□□□□□ -0.42
SHANK2-211ENST00000449833 ZFYVE19Q96K21 471 aa12.43□□□□□ -0.42
SHANK2-211ENST00000449833 H0Y3Z8 333 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 GTPBP6O43824 516 aaPredicted RBP12.42□□□□□ -0.42
SHANK2-211ENST00000449833 TOMM70O94826 608 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 ARPC4P59998 168 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 SPOUT1Q5T280 376 aaKnown RBP12.42□□□□□ -0.42
SHANK2-211ENST00000449833 RGS9BPQ6ZS82 235 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 IVNS1ABPQ9Y6Y0 642 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 PPIP5K1Q6PFW1 1433 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 WDR7Q9Y4E6 1490 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 CCDC22O60826 627 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 PTPREP23469 700 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 GALNT17Q6IS24 598 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 DENND6AQ8IWF6 608 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 AGGF1Q8N302 714 aaeCLIP12.42□□□□□ -0.422e-7■■■■■ 29
SHANK2-211ENST00000449833 KCTD6Q8NC69 237 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 CHAMP1Q96JM3 812 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 EPN3Q9H201 632 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 VPS54Q9P1Q0 977 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 PCDHA12Q9UN75 941 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 SGSM2O43147 1006 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 ZMYND10O75800 440 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 OCM2P0CE71 109 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 OCMP0CE72 109 aaPredicted RBP12.42□□□□□ -0.42
SHANK2-211ENST00000449833 TJAP1Q5JTD0 557 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 SIX6OS1Q8N1H7 587 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 ASZ1Q8WWH4 475 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 LSG1Q9H089 658 aaKnown RBP12.42□□□□□ -0.42
SHANK2-211ENST00000449833 ARMT1Q9H993 441 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 TMA7Q9Y2S6 64 aaKnown RBP12.42□□□□□ -0.42
SHANK2-211ENST00000449833 MAGEA13PA6NCF6 341 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 PAMP19021 973 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 MFAP3P55082 362 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 CAPRIN1Q14444 709 aaKnown RBP12.42□□□□□ -0.42
SHANK2-211ENST00000449833 RINLQ6ZS11 566 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 USP40Q9NVE5 1235 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 FAM95CA0A1B0GW59 222 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 ENC1O14682 589 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 DLATP10515 647 aaKnown RBP12.42□□□□□ -0.42
SHANK2-211ENST00000449833 DR1Q01658 176 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 DNAJC9Q8WXX5 260 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 OTULINQ96BN8 352 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 RBM17Q96I25 401 aaKnown RBP12.42□□□□□ -0.42
SHANK2-211ENST00000449833 PHACTR3Q96KR7 559 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 B3GALT6Q96L58 329 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 CNOT6LQ96LI5 555 aaKnown RBP12.42□□□□□ -0.42
SHANK2-211ENST00000449833 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.42□□□□□ -0.423e-7■□□□□ 9.7
SHANK2-211ENST00000449833 NSFL1CQ9UNZ2 370 aaKnown RBP12.42□□□□□ -0.42
SHANK2-211ENST00000449833 RNF103-CHMP3A0A140T963 221 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 RUNDC3AQ59EK9 446 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 TNNI3KQ59H18 835 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 NAIF1Q69YI7 327 aaPredicted RBP12.42□□□□□ -0.42
SHANK2-211ENST00000449833 SPTLC3Q9NUV7 552 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 BTBD7Q9P203 1132 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 FPGT-TNNI3KV9GXZ4 949 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 NOS1P29475 1434 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 TBC1D4O60343 1298 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 ZBED4O75132 1171 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 ABL1P00519 1130 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 IL10P22301 178 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 RAPGEF5Q92565 580 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 SNX25Q9H3E2 840 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 PCDHB4Q9Y5E5 795 aa12.42□□□□□ -0.42
SHANK2-211ENST00000449833 PPARGP37231 505 aaPredicted RBP12.41□□□□□ -0.42
SHANK2-211ENST00000449833 ACTN3Q08043 901 aaPredicted RBP12.41□□□□□ -0.42
SHANK2-211ENST00000449833 IFRD2Q12894 506 aaPredicted RBP12.41□□□□□ -0.42
SHANK2-211ENST00000449833 NOP9Q86U38 636 aaKnown RBP12.41□□□□□ -0.42
SHANK2-211ENST00000449833 PHF21AQ96BD5 680 aa12.41□□□□□ -0.42
SHANK2-211ENST00000449833 ASPSCR1Q9BZE9 553 aa12.41□□□□□ -0.42
SHANK2-211ENST00000449833 WDR91A4D1P6 747 aa12.41□□□□□ -0.42
SHANK2-211ENST00000449833 CMA1P23946 247 aa12.41□□□□□ -0.42
SHANK2-211ENST00000449833 VCPP55072 806 aaKnown RBP12.41□□□□□ -0.42
SHANK2-211ENST00000449833 EIF6P56537 245 aaKnown RBP12.41□□□□□ -0.42
SHANK2-211ENST00000449833 DSG1Q02413 1049 aa12.41□□□□□ -0.42
SHANK2-211ENST00000449833 BEND6Q5SZJ8 279 aaPredicted RBP12.41□□□□□ -0.42
SHANK2-211ENST00000449833 TRIM69Q86WT6 500 aa12.41□□□□□ -0.42
SHANK2-211ENST00000449833 KIAA0825Q8IV33 1275 aa12.41□□□□□ -0.42
SHANK2-211ENST00000449833 CUEDC2Q9H467 287 aa12.41□□□□□ -0.42
SHANK2-211ENST00000449833 ZMYM6O95789 1325 aa12.41□□□□□ -0.42
SHANK2-211ENST00000449833 MSL3P1P0C860 447 aa12.41□□□□□ -0.42
SHANK2-211ENST00000449833 TRIM49P0CI25 452 aa12.41□□□□□ -0.42
SHANK2-211ENST00000449833 TRIM49CP0CI26 452 aa12.41□□□□□ -0.42
SHANK2-211ENST00000449833 CASP14P31944 242 aa12.41□□□□□ -0.42
SHANK2-211ENST00000449833 HDLBPQ00341 1268 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms