RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 FRA10AC1Q70Z53 315 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 HACL1Q9UJ83 578 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 RFX7Q2KHR2 1363 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 IPO5O00410 1097 aaKnown RBP12.61□□□□□ -0.39
FN1-212ENST00000446046 PNMA8AQ86V59 439 aaPredicted RBP12.61□□□□□ -0.39
FN1-212ENST00000446046 FAM49AQ9H0Q0 323 aaPredicted RBP12.61□□□□□ -0.39
FN1-212ENST00000446046 OSBPL3Q9H4L5 887 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 CDHR2Q9BYE9 1310 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 SLC39A14Q15043 492 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 PGBD1Q96JS3 809 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 PSMB7Q99436 277 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 RWDD2AQ9UIY3 292 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 C19orf81C9J6K1 198 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 RPLP2P05387 115 aaKnown RBP12.61□□□□□ -0.39
FN1-212ENST00000446046 CALB1P05937 261 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 RAD51Q06609 339 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 CCDC15Q0P6D6 951 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 ZNF568Q3ZCX4 644 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 TEX12Q9BXU0 123 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 ZNF302Q9NR11 478 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 OGFRQ9NZT2 677 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 MINPP1Q9UNW1 487 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 MROH7-TTC4A0A0A0MT08 1334 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 ZBTB7AO95365 584 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 EIF2AK2P19525 551 aaKnown RBP12.61□□□□□ -0.39
FN1-212ENST00000446046 COPB1P53618 953 aaKnown RBP12.61□□□□□ -0.39
FN1-212ENST00000446046 VPS39Q96JC1 886 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 TSSK1BQ9BXA7 367 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 GPC4O75487 556 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 SASH1O94885 1247 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 ACTN1P12814 892 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 TTC23LQ6PF05 361 aa12.61□□□□□ -0.39
FN1-212ENST00000446046 GOLGA8KD6RF30 607 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 SERPING1P05155 500 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 SKIP12755 728 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 PRELPP51888 382 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 MESDQ14696 234 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 ZNF699Q32M78 642 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 SGO2Q562F6 1265 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 DARS2Q6PI48 645 aaKnown RBP12.6□□□□□ -0.39
FN1-212ENST00000446046 LRRC8CQ8TDW0 803 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 MAGOHBQ96A72 148 aaKnown RBP12.6□□□□□ -0.39
FN1-212ENST00000446046 SRPRBQ9Y5M8 271 aaKnown RBP12.6□□□□□ -0.39
FN1-212ENST00000446046 AP3M2P53677 418 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 CABS1Q96KC9 395 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 EFHD1Q9BUP0 239 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 FSD1LQ9BXM9 530 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.6□□□□□ -0.392e-7■■■■□ 25.7
FN1-212ENST00000446046 SOX5P35711 763 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 DYNLL1P63167 89 aaKnown RBP12.6□□□□□ -0.39
FN1-212ENST00000446046 EDC3Q96F86 508 aaKnown RBP12.6□□□□□ -0.39
FN1-212ENST00000446046 CALN1Q9BXU9 219 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 XPO4Q9C0E2 1151 aaKnown RBP12.6□□□□□ -0.39
FN1-212ENST00000446046 CYP26B1Q9NR63 512 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 GINM1Q9NU53 330 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 PFASO15067 1338 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 CLGNO14967 610 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 PAPOLAP51003 745 aaKnown RBP12.6□□□□□ -0.39
FN1-212ENST00000446046 TRMT44Q8IYL2 757 aaKnown RBP12.6□□□□□ -0.39
FN1-212ENST00000446046 MB21D1Q8N884 522 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 GDAP1Q8TB36 358 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 ZNRF3Q9ULT6 936 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 SH2B2O14492 632 aaPredicted RBP12.6□□□□□ -0.39
FN1-212ENST00000446046 SLC26A4O43511 780 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 TRIM72Q6ZMU5 477 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 MIPOL1Q8TD10 442 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 UBE2TQ9NPD8 197 aaPredicted RBP12.6□□□□□ -0.39
FN1-212ENST00000446046 SRP68Q9UHB9 627 aaKnown RBP12.6□□□□□ -0.39
FN1-212ENST00000446046 SPATA31E1Q6ZUB1 1445 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 CPDO75976 1380 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 RALAP11233 206 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 NDUFA8P51970 172 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 YWHAGP61981 247 aaKnown RBP eCLIP12.6□□□□□ -0.39
FN1-212ENST00000446046 IL9RQ01113 521 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 CDR2Q01850 454 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 DRC3Q9H069 523 aa12.6□□□□□ -0.39
FN1-212ENST00000446046 ZBBXA8MT70 800 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 NVLO15381 856 aaKnown RBP12.59□□□□□ -0.39
FN1-212ENST00000446046 SART1O43290 800 aaKnown RBP12.59□□□□□ -0.39
FN1-212ENST00000446046 ZNF853P0CG23 659 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 DDIT3P35638 169 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 SLC16A2P36021 539 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 VPS72Q15906 364 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 PHLDB3Q6NSJ2 640 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 OR6B3Q8NGW1 331 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 PGBD4Q96DM1 585 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 SPATA33Q96N06 139 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 CD209Q9NNX6 404 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 PPRC1Q5VV67 1664 aaKnown RBP12.59□□□□□ -0.39
FN1-212ENST00000446046 LRRN2O75325 713 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 STRIP1Q5VSL9 837 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 AFG1LQ8WV93 481 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 SLC7A5P2Q9GIP4 190 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 TNPO2O14787 897 aaKnown RBP12.59□□□□□ -0.39
FN1-212ENST00000446046 RPS12P25398 132 aaKnown RBP12.59□□□□□ -0.39
FN1-212ENST00000446046 SFSWAPQ12872 951 aaKnown RBP12.59□□□□□ -0.39
FN1-212ENST00000446046 RWDD4Q6NW29 188 aaKnown RBP12.59□□□□□ -0.39
FN1-212ENST00000446046 ENOSF1Q7L5Y1 443 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 IFT43Q96FT9 208 aa12.59□□□□□ -0.39
FN1-212ENST00000446046 PLEKHF1Q96S99 279 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms