RNA–Protein interactions for RNA: ENST00000443560.1

NUCB1-205, Transcript of nucleobindin 1, humanhuman

TSL 4

Gene NUCB1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-205ENST00000443560 MXRA8Q9BRK3 442 aa17.3■□□□□ 0.36
NUCB1-205ENST00000443560 LRRC2Q9BYS8 371 aa17.3■□□□□ 0.36
NUCB1-205ENST00000443560 PADI3Q9ULW8 664 aa17.3■□□□□ 0.36
NUCB1-205ENST00000443560 PLAGL2Q9UPG8 496 aa17.3■□□□□ 0.36
NUCB1-205ENST00000443560 PCDHA2Q9Y5H9 948 aa17.3■□□□□ 0.36
NUCB1-205ENST00000443560 PLXNA4Q9HCM2 1894 aa17.3■□□□□ 0.36
NUCB1-205ENST00000443560 FNDC1Q4ZHG4 1894 aaPredicted RBP17.29■□□□□ 0.36
NUCB1-205ENST00000443560 NFASCO94856 1347 aa17.29■□□□□ 0.36
NUCB1-205ENST00000443560 IGSF9BQ9UPX0 1349 aa17.29■□□□□ 0.36
NUCB1-205ENST00000443560 SCG2P13521 617 aa17.29■□□□□ 0.36
NUCB1-205ENST00000443560 GTF2F1P35269 517 aaKnown RBP eCLIP17.29■□□□□ 0.363e-8■■■■□ 26
NUCB1-205ENST00000443560 NDUFV1P49821 464 aa17.29■□□□□ 0.36
NUCB1-205ENST00000443560 STAT5BP51692 787 aa17.29■□□□□ 0.36
NUCB1-205ENST00000443560 SYNE3Q6ZMZ3 975 aa17.29■□□□□ 0.36
NUCB1-205ENST00000443560 PLPPR4Q7Z2D5 763 aa17.29■□□□□ 0.36
NUCB1-205ENST00000443560 RTN4RL1Q86UN2 441 aaPredicted RBP17.29■□□□□ 0.36
NUCB1-205ENST00000443560 LSG1Q9H089 658 aaKnown RBP17.29■□□□□ 0.36
NUCB1-205ENST00000443560 CD207Q9UJ71 328 aa17.29■□□□□ 0.36
NUCB1-205ENST00000443560 LRFN2Q9ULH4 789 aa17.29■□□□□ 0.36
NUCB1-205ENST00000443560 LINC01565O15544 149 aa17.28■□□□□ 0.36
NUCB1-205ENST00000443560 ITGB1P05556 798 aa17.28■□□□□ 0.36
NUCB1-205ENST00000443560 IBSPP21815 317 aaPredicted RBP17.28■□□□□ 0.36
NUCB1-205ENST00000443560 NAPAP54920 295 aa17.28■□□□□ 0.36
NUCB1-205ENST00000443560 ACTR2P61160 394 aa17.28■□□□□ 0.36
NUCB1-205ENST00000443560 CAMK1Q14012 370 aa17.28■□□□□ 0.36
NUCB1-205ENST00000443560 COL9A3Q14050 684 aaPredicted RBP17.28■□□□□ 0.36
NUCB1-205ENST00000443560 CREB3L3Q68CJ9 461 aa17.28■□□□□ 0.36
NUCB1-205ENST00000443560 WWC2Q6AWC2 1192 aa17.28■□□□□ 0.36
NUCB1-205ENST00000443560 CELF4Q9BZC1 486 aaKnown RBP17.28■□□□□ 0.36
NUCB1-205ENST00000443560 TECTAO75443 2155 aa17.28■□□□□ 0.36
NUCB1-205ENST00000443560 STXBP3O00186 592 aa17.27■□□□□ 0.36
NUCB1-205ENST00000443560 FOSP01100 380 aaPredicted RBP17.27■□□□□ 0.36
NUCB1-205ENST00000443560 KRT76Q01546 638 aa17.27■□□□□ 0.36
NUCB1-205ENST00000443560 ADAM15Q13444 863 aa17.27■□□□□ 0.36
NUCB1-205ENST00000443560 CEP55Q53EZ4 464 aa17.27■□□□□ 0.36
NUCB1-205ENST00000443560 ALYREFQ86V81 257 aaKnown RBP17.27■□□□□ 0.36
NUCB1-205ENST00000443560 SGMS1Q86VZ5 419 aa17.27■□□□□ 0.36
NUCB1-205ENST00000443560 CRIPAKQ8N1N5 446 aa17.27■□□□□ 0.36
NUCB1-205ENST00000443560 NME8Q8N427 588 aa17.27■□□□□ 0.36
NUCB1-205ENST00000443560 KLHL23Q8NBE8 558 aa17.27■□□□□ 0.36
NUCB1-205ENST00000443560 CYP2W1Q8TAV3 490 aa17.27■□□□□ 0.36
NUCB1-205ENST00000443560 SPPL3Q8TCT6 385 aa17.27■□□□□ 0.36
NUCB1-205ENST00000443560 PGBD1Q96JS3 809 aa17.27■□□□□ 0.36
NUCB1-205ENST00000443560 RIC8AQ9NPQ8 531 aa17.27■□□□□ 0.36
NUCB1-205ENST00000443560 MUTYHQ9UIF7 546 aa17.27■□□□□ 0.36
NUCB1-205ENST00000443560 CNTNAP5Q8WYK1 1306 aa17.26■□□□□ 0.35
NUCB1-205ENST00000443560 KDM3AQ9Y4C1 1321 aa17.26■□□□□ 0.35
NUCB1-205ENST00000443560 SMIM35A0A1B0GVV1 85 aa17.26■□□□□ 0.35
NUCB1-205ENST00000443560 ARP10275 920 aa17.26■□□□□ 0.35
NUCB1-205ENST00000443560 DNAJB1P25685 340 aa17.26■□□□□ 0.35
NUCB1-205ENST00000443560 GATMP50440 423 aa17.26■□□□□ 0.35
NUCB1-205ENST00000443560 SLC26A2P50443 739 aa17.26■□□□□ 0.35
NUCB1-205ENST00000443560 ADCY7P51828 1080 aa17.26■□□□□ 0.35
NUCB1-205ENST00000443560 NFX1Q12986 1120 aaKnown RBP17.26■□□□□ 0.35
NUCB1-205ENST00000443560 TMEM266Q2M3C6 531 aa17.26■□□□□ 0.35
NUCB1-205ENST00000443560 PPP1R18Q6NYC8 613 aa17.26■□□□□ 0.35
NUCB1-205ENST00000443560 MTHFD1LQ6UB35 978 aa17.26■□□□□ 0.35
NUCB1-205ENST00000443560 RNF135Q8IUD6 432 aa17.26■□□□□ 0.35
NUCB1-205ENST00000443560 TEX2Q8IWB9 1127 aa17.26■□□□□ 0.35
NUCB1-205ENST00000443560 POF1BQ8WVV4 589 aa17.26■□□□□ 0.35
NUCB1-205ENST00000443560 ESYT1Q9BSJ8 1104 aa17.26■□□□□ 0.35
NUCB1-205ENST00000443560 ANO3Q9BYT9 981 aa17.26■□□□□ 0.35
NUCB1-205ENST00000443560 ANO2Q9NQ90 1003 aa17.26■□□□□ 0.35
NUCB1-205ENST00000443560 RBM28Q9NW13 759 aaKnown RBP17.26■□□□□ 0.35
NUCB1-205ENST00000443560 GINS2Q9Y248 185 aa17.26■□□□□ 0.35
NUCB1-205ENST00000443560 WDR81Q562E7 1941 aa17.25■□□□□ 0.35
NUCB1-205ENST00000443560 TRIOO75962 3097 aa17.25■□□□□ 0.35
NUCB1-205ENST00000443560 DDX39AO00148 427 aaKnown RBP17.25■□□□□ 0.35
NUCB1-205ENST00000443560 BACH1O14867 736 aa17.25■□□□□ 0.35
NUCB1-205ENST00000443560 ZNF76P36508 570 aa17.25■□□□□ 0.35
NUCB1-205ENST00000443560 IRX6P78412 446 aaPredicted RBP17.25■□□□□ 0.35
NUCB1-205ENST00000443560 ITGB3BPQ13352 177 aaPredicted RBP17.25■□□□□ 0.35
NUCB1-205ENST00000443560 HERC4Q5GLZ8 1057 aaPredicted RBP17.25■□□□□ 0.35
NUCB1-205ENST00000443560 SPOUT1Q5T280 376 aaKnown RBP17.25■□□□□ 0.35
NUCB1-205ENST00000443560 FAM160B1Q5W0V3 765 aa17.25■□□□□ 0.35
NUCB1-205ENST00000443560 HFE2Q6ZVN8 426 aa17.25■□□□□ 0.35
NUCB1-205ENST00000443560 ADGRD2Q7Z7M1 963 aa17.25■□□□□ 0.35
NUCB1-205ENST00000443560 EFHBQ8N7U6 833 aa17.25■□□□□ 0.35
NUCB1-205ENST00000443560 KCNH6Q9H252 994 aa17.25■□□□□ 0.35
NUCB1-205ENST00000443560 AGO4Q9HCK5 861 aaKnown RBP17.25■□□□□ 0.35
NUCB1-205ENST00000443560 PCDHB7Q9Y5E2 793 aa17.25■□□□□ 0.35
NUCB1-205ENST00000443560 WDFY4Q6ZS81 3184 aa17.24■□□□□ 0.35
NUCB1-205ENST00000443560 hCG_1984214I3L0E3 225 aa17.24■□□□□ 0.35
NUCB1-205ENST00000443560 HBP1O60381 514 aa17.24■□□□□ 0.35
NUCB1-205ENST00000443560 PPFIA3O75145 1194 aa17.24■□□□□ 0.35
NUCB1-205ENST00000443560 RPS6KA5O75582 802 aa17.24■□□□□ 0.35
NUCB1-205ENST00000443560 ATG7O95352 703 aa17.24■□□□□ 0.35
NUCB1-205ENST00000443560 NRIP1P48552 1158 aa17.24■□□□□ 0.35
NUCB1-205ENST00000443560 SARSP49591 514 aaKnown RBP17.24■□□□□ 0.35
NUCB1-205ENST00000443560 AP3B2Q13367 1082 aa17.24■□□□□ 0.35
NUCB1-205ENST00000443560 NECTIN1Q15223 517 aa17.24■□□□□ 0.35
NUCB1-205ENST00000443560 RTN1Q16799 776 aa17.24■□□□□ 0.35
NUCB1-205ENST00000443560 ODR4Q5SWX8 454 aa17.24■□□□□ 0.35
NUCB1-205ENST00000443560 RNF20Q5VTR2 975 aa17.24■□□□□ 0.35
NUCB1-205ENST00000443560 TYW1BQ6NUM6 668 aa17.24■□□□□ 0.35
NUCB1-205ENST00000443560 APOA5Q6Q788 366 aa17.24■□□□□ 0.35
NUCB1-205ENST00000443560 RBM23Q86U06 439 aaKnown RBP17.24■□□□□ 0.35
NUCB1-205ENST00000443560 ZNF713Q8N859 430 aaPredicted RBP17.24■□□□□ 0.35
NUCB1-205ENST00000443560 MSLNLQ96KJ4 702 aa17.24■□□□□ 0.35
NUCB1-205ENST00000443560 MFSD14AQ96MC6 490 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms