RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 NFASCO94856 1347 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 FAM86B1E9PN63 330 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 FAM86B2P0C5J1 330 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 MLLT3P42568 568 aaPredicted RBP9.94□□□□□ -0.82
USP6NL-203ENST00000443016 TAP1Q03518 808 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 ITGB3BPQ13352 177 aaPredicted RBP9.94□□□□□ -0.82
USP6NL-203ENST00000443016 PLEKHG4Q58EX7 1191 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 RAD9AQ99638 391 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 ZNF577Q9BSK1 485 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 IFIH1Q9BYX4 1025 aaKnown RBP9.94□□□□□ -0.82
USP6NL-203ENST00000443016 VPS54Q9P1Q0 977 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 PRRC2BQ5JSZ5 2229 aaKnown RBP9.94□□□□□ -0.82
USP6NL-203ENST00000443016 RRN3P2A6NIE6 340 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 RBAK-RBAKDNI3L0D1 243 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 RFXAPO00287 272 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 IPO5O00410 1097 aaKnown RBP9.93□□□□□ -0.82
USP6NL-203ENST00000443016 UPP2O95045 317 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 BRD1O95696 1058 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 INSRRP14616 1297 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 NLRP5P59047 1200 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 ADAM17P78536 824 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 SSRP1Q08945 709 aaKnown RBP9.93□□□□□ -0.82
USP6NL-203ENST00000443016 BECN1Q14457 450 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 NTRK3Q16288 839 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 TCTN1Q2MV58 587 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.93□□□□□ -0.82
USP6NL-203ENST00000443016 RASGRP4Q8TDF6 673 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 DNAJB3Q8WWF6 145 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 FAM49AQ9H0Q0 323 aaPredicted RBP9.93□□□□□ -0.82
USP6NL-203ENST00000443016 TSPYL2Q9H2G4 693 aaPredicted RBP9.93□□□□□ -0.82
USP6NL-203ENST00000443016 PDRG1Q9NUG6 133 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 KAT6AQ92794 2004 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 GBF1Q92538 1859 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 LCHNA4D1U4 455 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 GHRP10912 638 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 MCM2P49736 904 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 NEK4P51957 841 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 EVCP57679 992 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 SETQ01105 290 aaPredicted RBP9.93□□□□□ -0.82
USP6NL-203ENST00000443016 TOB2Q14106 344 aaPredicted RBP9.93□□□□□ -0.82
USP6NL-203ENST00000443016 ANKRD1Q15327 319 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 PRR16Q569H4 304 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 RUFY4Q6ZNE9 571 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 NIPA1Q7RTP0 329 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 PLPPR4Q7Z2D5 763 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 TRMT1LQ7Z2T5 733 aaKnown RBP9.93□□□□□ -0.82
USP6NL-203ENST00000443016 HSCBQ8IWL3 235 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 CKAP2LQ8IYA6 745 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 KIF2CQ99661 725 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 SAMM50Q9Y512 469 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 INSL6Q9Y581 213 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 NID2Q14112 1375 aa9.93□□□□□ -0.82
USP6NL-203ENST00000443016 POTEB3A0JP26 581 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 M0QZ92 97 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 SLC26A2P50443 739 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 FAM160B1Q5W0V3 765 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 POTEBQ6S5H4 581 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 GPIHBP1Q8IV16 184 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 APBB2Q92870 758 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 ZNF274Q96GC6 653 aaPredicted RBP9.92□□□□□ -0.82
USP6NL-203ENST00000443016 SPATA32Q96LK8 384 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 YME1L1Q96TA2 773 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 PCYT2Q99447 389 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 COL25A1Q9BXS0 654 aaPredicted RBP9.92□□□□□ -0.82
USP6NL-203ENST00000443016 TBC1D22BQ9NU19 505 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 CLSTN1O94985 981 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 ARHGEF15O94989 841 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 CHRNA1P02708 482 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 RPLP2P05387 115 aaKnown RBP9.92□□□□□ -0.82
USP6NL-203ENST00000443016 CYP3A4P08684 503 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 IER5Q5VY09 327 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 MIS18BP1Q6P0N0 1132 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 PDXDC2PQ6P474 469 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 PRDM6Q9NQX0 595 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 BDP1A6H8Y1 2624 aa9.92□□□□□ -0.82
USP6NL-203ENST00000443016 MBLAC1A4D2B0 266 aaPredicted RBP9.91□□□□□ -0.82
USP6NL-203ENST00000443016 DEXIO95424 95 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 CCNE2O96020 404 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 TMEM62Q0P6H9 643 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 PLCB4Q15147 1175 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 MARCH8Q5T0T0 291 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 SWSAP1Q6NVH7 229 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 TRAPPC12Q8WVT3 735 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 ZBTB10Q96DT7 871 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 TGS1Q96RS0 853 aaKnown RBP9.91□□□□□ -0.82
USP6NL-203ENST00000443016 OSBPL7Q9BZF2 842 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 ZNF302Q9NR11 478 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 SH3GLB2Q9NR46 395 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 THEGQ9P2T0 379 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 GINS2Q9Y248 185 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 IGLV3-22A0A075B6J6 115 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 ADAMTS3O15072 1205 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 CDKL5O76039 1030 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 FAM26DQ5JW98 314 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 SPRED2Q7Z698 418 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 RPAINQ86UA6 219 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 CRYGNQ8WXF5 182 aa9.91□□□□□ -0.82
USP6NL-203ENST00000443016 SYMPKQ92797 1274 aaKnown RBP9.91□□□□□ -0.82
USP6NL-203ENST00000443016 SLKQ9H2G2 1235 aaPredicted RBP9.91□□□□□ -0.82
USP6NL-203ENST00000443016 CDY2AQ9Y6F7 541 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms