RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 FAM43BQ6ZT52 329 aaPredicted RBP13.24□□□□□ -0.29
UBE2D4-204ENST00000440899 FAM178BQ8IXR5 827 aa13.24□□□□□ -0.29
UBE2D4-204ENST00000440899 NEK9Q8TD19 979 aa13.24□□□□□ -0.29
UBE2D4-204ENST00000440899 TRAPPC12Q8WVT3 735 aa13.24□□□□□ -0.29
UBE2D4-204ENST00000440899 ZNF689Q96CS4 500 aaPredicted RBP13.24□□□□□ -0.29
UBE2D4-204ENST00000440899 PABPC5Q96DU9 382 aaKnown RBP13.24□□□□□ -0.29
UBE2D4-204ENST00000440899 CELF4Q9BZC1 486 aaKnown RBP13.24□□□□□ -0.29
UBE2D4-204ENST00000440899 LMAN2LQ9H0V9 348 aa13.24□□□□□ -0.29
UBE2D4-204ENST00000440899 EPHX3Q9H6B9 360 aa13.24□□□□□ -0.29
UBE2D4-204ENST00000440899 RC3H2Q9HBD1 1191 aaKnown RBP13.24□□□□□ -0.29
UBE2D4-204ENST00000440899 PADI3Q9ULW8 664 aa13.24□□□□□ -0.29
UBE2D4-204ENST00000440899 IGSF9BQ9UPX0 1349 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 KDM3AQ9Y4C1 1321 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 ESYT2A0FGR8 921 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 GRXCR2A6NFK2 248 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 BACH1O14867 736 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 HBP1O60381 514 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 DGKIO75912 1065 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 CCNE2O96020 404 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 CYP3A4P08684 503 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 LINC00271P0C7V0 271 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 SCG2P13521 617 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 TMEM62Q0P6H9 643 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 APOBRQ0VD83 1088 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 COL19A1Q14993 1142 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 JAKMIP3Q5VZ66 844 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 PTCRAQ6ISU1 281 aaPredicted RBP13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 MTHFD1LQ6UB35 978 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 RTN4RL1Q86UN2 441 aaPredicted RBP13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 PLA2G4DQ86XP0 818 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 NPAS4Q8IUM7 802 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 CCDC12Q8WUD4 166 aaPredicted RBP13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 LINC01599Q8WXQ3 324 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 KCNB2Q92953 911 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 PLVAPQ9BX97 442 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 MYO7AQ13402 2215 aa13.23□□□□□ -0.29
UBE2D4-204ENST00000440899 TTC3P53804 2025 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 FAM86B1E9PN63 330 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 H3BQ06 376 aaPredicted RBP13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 DDX39AO00148 427 aaKnown RBP13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 IPO5O00410 1097 aaKnown RBP13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 DHX15O43143 795 aaKnown RBP13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 FAM86B2P0C5J1 330 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 STAG3L1P0CL83 205 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 CPA1P15085 419 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 KLRC1P26715 233 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 KRT76Q01546 638 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 PAK2Q13177 524 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 ZNF484Q5JVG2 852 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 PDXDC2PQ6P474 469 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 EP400NLQ6ZTU2 488 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 Q6ZUG5 572 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 CRIPAKQ8N1N5 446 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 ATP8B4Q8TF62 1192 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 CRYGNQ8WXF5 182 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 ZMYND12Q9H0C1 365 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 C6orf50Q9HD87 102 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 CD320Q9NPF0 282 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 TBC1D22BQ9NU19 505 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 RAPGEFL1Q9UHV5 662 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 FAM50BQ9Y247 325 aa13.22□□□□□ -0.29
UBE2D4-204ENST00000440899 IGLV3-22A0A075B6J6 115 aa13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 GRM6O15303 877 aa13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 GNA11P29992 359 aa13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 NAALADL2Q58DX5 795 aa13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 TMEM31Q5JXX7 168 aa13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 SWSAP1Q6NVH7 229 aa13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 MIS18BP1Q6P0N0 1132 aa13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 BLOC1S2Q6QNY1 142 aa13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 CCDC60Q8IWA6 550 aaPredicted RBP13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 CMTR2Q8IYT2 770 aaKnown RBP13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 GJD3Q8N144 294 aa13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 REXO1Q8N1G1 1221 aaKnown RBP13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 FBXL16Q8N461 479 aa13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 KHSRPQ92945 711 aaKnown RBP eCLIP13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 BRF1Q92994 677 aa13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 P2RX5Q93086 422 aa13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 JAKMIP1Q96N16 626 aaKnown RBP13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 ZNF577Q9BSK1 485 aa13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 LRFN3Q9BTN0 628 aa13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 ZNF302Q9NR11 478 aa13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 CLDND1Q9NY35 253 aa13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 SNX14Q9Y5W7 946 aa13.21□□□□□ -0.29
UBE2D4-204ENST00000440899 COL1A2P08123 1366 aa13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 PI4K2BG5E9Z4 385 aa13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 PRPF3O43395 683 aaKnown RBP13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 GPR37L1O60883 481 aa13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 IL9P15248 144 aa13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 HSPA4P34932 840 aa13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 SETQ01105 290 aaPredicted RBP13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 AKAP17AQ02040 695 aaKnown RBP13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 PKN1Q16512 942 aa13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 CTC1Q2NKJ3 1217 aa13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 ODR4Q5SWX8 454 aa13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 ZNF746Q6NUN9 644 aaPredicted RBP13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 CKAP2LQ8IYA6 745 aa13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 KIAA0319LQ8IZA0 1049 aa13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 BICD2Q8TD16 824 aa13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 RNF216Q9NWF9 866 aaPredicted RBP13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 TCEAL9Q9UHQ7 104 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms