RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 YIPF3Q9GZM5 350 aa22.2■■□□□ 1.14
FMR1-208ENST00000440235 SEMA3EO15041 775 aa22.2■■□□□ 1.14
FMR1-208ENST00000440235 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.2■■□□□ 1.14
FMR1-208ENST00000440235 STK17AQ9UEE5 414 aa22.2■■□□□ 1.14
FMR1-208ENST00000440235 SNX12Q9UMY4 172 aa22.2■■□□□ 1.14
FMR1-208ENST00000440235 GMNCA6NCL1 334 aa22.19■■□□□ 1.14
FMR1-208ENST00000440235 GOLGA8MH3BSY2 632 aa22.19■■□□□ 1.14
FMR1-208ENST00000440235 LIG4P49917 911 aa22.19■■□□□ 1.14
FMR1-208ENST00000440235 TPD52P55327 224 aaPredicted RBP22.19■■□□□ 1.14
FMR1-208ENST00000440235 RASGRP2Q7LDG7 609 aa22.19■■□□□ 1.14
FMR1-208ENST00000440235 VCX3BQ9H321 246 aa22.19■■□□□ 1.14
FMR1-208ENST00000440235 BZW2Q9Y6E2 419 aaKnown RBP22.19■■□□□ 1.14
FMR1-208ENST00000440235 NALCNQ8IZF0 1738 aa22.19■■□□□ 1.14
FMR1-208ENST00000440235 GCLMP48507 274 aa22.19■■□□□ 1.14
FMR1-208ENST00000440235 LACRTQ9GZZ8 138 aa22.19■■□□□ 1.14
FMR1-208ENST00000440235 AZI2Q9H6S1 392 aa22.19■■□□□ 1.14
FMR1-208ENST00000440235 DNAJC12Q9UKB3 198 aa22.19■■□□□ 1.14
FMR1-208ENST00000440235 NPHP3-ACAD11A0A0J9YXS1 232 aa22.19■■□□□ 1.14
FMR1-208ENST00000440235 COPB2P35606 906 aa22.19■■□□□ 1.14
FMR1-208ENST00000440235 CCNI2Q6ZMN8 369 aaPredicted RBP22.19■■□□□ 1.14
FMR1-208ENST00000440235 MSANTD4Q8NCY6 345 aa22.19■■□□□ 1.14
FMR1-208ENST00000440235 LRRIQ3A6PVS8 624 aaPredicted RBP22.18■■□□□ 1.14
FMR1-208ENST00000440235 IL9RQ01113 521 aa22.18■■□□□ 1.14
FMR1-208ENST00000440235 BBS9Q3SYG4 887 aa22.18■■□□□ 1.14
FMR1-208ENST00000440235 FOXP4Q8IVH2 680 aaPredicted RBP22.18■■□□□ 1.14
FMR1-208ENST00000440235 SLFN12Q8IYM2 578 aa22.18■■□□□ 1.14
FMR1-208ENST00000440235 HVCN1Q96D96 273 aa22.18■■□□□ 1.14
FMR1-208ENST00000440235 DDX23Q9BUQ8 820 aaKnown RBP22.18■■□□□ 1.14
FMR1-208ENST00000440235 TMEM60Q9H2L4 133 aa22.18■■□□□ 1.14
FMR1-208ENST00000440235 DMGDHQ9UI17 866 aaKnown RBP22.18■■□□□ 1.14
FMR1-208ENST00000440235 RGPD1P0DJD0 1748 aa22.18■■□□□ 1.14
FMR1-208ENST00000440235 LAD1O00515 517 aa22.18■■□□□ 1.14
FMR1-208ENST00000440235 FOXR1Q6PIV2 292 aa22.18■■□□□ 1.14
FMR1-208ENST00000440235 ALDH8A1Q9H2A2 487 aaPredicted RBP22.18■■□□□ 1.14
FMR1-208ENST00000440235 DCTN4Q9UJW0 460 aa22.18■■□□□ 1.14
FMR1-208ENST00000440235 A0A0U1RQJ8 604 aa22.18■■□□□ 1.14
FMR1-208ENST00000440235 CD58P19256 250 aa22.18■■□□□ 1.14
FMR1-208ENST00000440235 TBC1D22AQ8WUA7 517 aa22.18■■□□□ 1.14
FMR1-208ENST00000440235 GLG1Q92896 1179 aa22.18■■□□□ 1.14
FMR1-208ENST00000440235 EXOC1LA0A1B0GW35 172 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 TOM1O60784 492 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 NXNQ6DKJ4 435 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 UNC13DQ70J99 1090 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 KIRREL3Q8IZU9 778 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 KCNB2Q92953 911 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 ANO9A1A5B4 782 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 CLGNO14967 610 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 POLR2MP0CAP2 368 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 SERPINB6P35237 376 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 ATP2C1P98194 919 aaPredicted RBP22.17■■□□□ 1.14
FMR1-208ENST00000440235 LRRC63Q05C16 580 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 PPP2R5EQ16537 467 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 CEP95Q96GE4 821 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.17■■□□□ 1.14
FMR1-208ENST00000440235 EPB41L4AQ9HCS5 686 aaPredicted RBP22.17■■□□□ 1.14
FMR1-208ENST00000440235 LRRD1A4D1F6 860 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 ERVK-24P63145 666 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 PBKQ96KB5 322 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 TRIM51Q9BSJ1 452 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 PPP1R37O75864 691 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 SASH3O75995 380 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 GRM1Q13255 1194 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 NCAPHQ15003 741 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 PASD1Q8IV76 773 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 LARGE2Q8N3Y3 721 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 DEPTORQ8TB45 409 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 NT5C1BQ96P26 610 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 RNF14Q9UBS8 474 aa22.17■■□□□ 1.14
FMR1-208ENST00000440235 OSTNP61366 133 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 BASP1P80723 227 aaKnown RBP22.16■■□□□ 1.14
FMR1-208ENST00000440235 RUNDC3BQ96NL0 473 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 CCT8L2Q96SF2 557 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 TRIM9Q9C026 710 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 MAGEF1Q9HAY2 307 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 ANAPC4Q9UJX5 808 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 CAPN11Q9UMQ6 739 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 A0A0G2JND7 137 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 H7C0C1 242 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 SART1O43290 800 aaKnown RBP22.16■■□□□ 1.14
FMR1-208ENST00000440235 ATP5OP48047 213 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 ARHGAP24Q8N264 748 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 RNF34Q969K3 372 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 HPCAL4Q9UM19 191 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 LMTK3Q96Q04 1460 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 TTLL1O95922 423 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 MSH2P43246 934 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 MXI1P50539 228 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 CASP7P55210 303 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 LRRC43Q8N309 656 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 METTL13Q8N6R0 699 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 RAB3IPQ96QF0 476 aaPredicted RBP22.16■■□□□ 1.14
FMR1-208ENST00000440235 ZNF577Q9BSK1 485 aa22.16■■□□□ 1.14
FMR1-208ENST00000440235 PTK2Q05397 1052 aa22.15■■□□□ 1.14
FMR1-208ENST00000440235 HAUS2Q9NVX0 235 aa22.15■■□□□ 1.14
FMR1-208ENST00000440235 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.15■■□□□ 1.14
FMR1-208ENST00000440235 NOP56O00567 594 aaKnown RBP22.15■■□□□ 1.14
FMR1-208ENST00000440235 COASYQ13057 564 aa22.15■■□□□ 1.14
FMR1-208ENST00000440235 CALN1Q9BXU9 219 aa22.15■■□□□ 1.14
FMR1-208ENST00000440235 PITPNM3Q9BZ71 974 aa22.15■■□□□ 1.14
FMR1-208ENST00000440235 ALG13Q9NP73 1137 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms