RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 RBBP6Q7Z6E9 1792 aaKnown RBP15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 MACROD2A1Z1Q3 448 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 TRAF5O00463 557 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 VSNL1P62760 191 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 FAM20AQ96MK3 541 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 TSG101Q99816 390 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 BMP2KQ9NSY1 1161 aaPredicted RBP15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 MYO6Q9UM54 1294 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 OTOFQ9HC10 1997 aa15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 MEIS1O00470 390 aa15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 ZBED4O75132 1171 aa15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 FGFR1OPO95684 399 aaKnown RBP15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 TNNT3P45378 269 aaPredicted RBP15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 AMPD2Q01433 879 aa15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 PSMD2Q13200 908 aa15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 C12orf42Q96LP6 360 aa15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 COL20A1Q9P218 1284 aa15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 C19orf81C9J6K1 198 aa15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 VWA5AO00534 786 aa15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 SRGAP2O75044 1071 aa15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 ATP1A1P05023 1023 aaKnown RBP15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 KRT18P05783 430 aaKnown RBP15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 VGLL4Q14135 290 aa15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 BRD3Q15059 726 aa15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 HERC4Q5GLZ8 1057 aaPredicted RBP15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 HYIQ5T013 277 aa15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 SMCR8Q8TEV9 937 aaPredicted RBP15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 CCDC42Q96M95 316 aa15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 L1RE1Q9UN81 338 aa15.3■□□□□ 0.04
PTCHD3-201ENST00000438700 WDR90Q96KV7 1748 aa15.29■□□□□ 0.04
PTCHD3-201ENST00000438700 A0A1W2PQJ5 194 aa15.29■□□□□ 0.04
PTCHD3-201ENST00000438700 CTAGE15A4D2H0 777 aa15.29■□□□□ 0.04
PTCHD3-201ENST00000438700 ZNF263O14978 683 aa15.29■□□□□ 0.04
PTCHD3-201ENST00000438700 KRT86O43790 486 aa15.29■□□□□ 0.04
PTCHD3-201ENST00000438700 CTAGE8P0CG41 777 aa15.29■□□□□ 0.04
PTCHD3-201ENST00000438700 SKIDA1Q1XH10 827 aa15.29■□□□□ 0.04
PTCHD3-201ENST00000438700 FIGNQ5HY92 759 aa15.29■□□□□ 0.04
PTCHD3-201ENST00000438700 CTAGE6Q86UF2 777 aa15.29■□□□□ 0.04
PTCHD3-201ENST00000438700 CTAGE4Q8IX94 777 aa15.29■□□□□ 0.04
PTCHD3-201ENST00000438700 TSPYL1Q9H0U9 437 aa15.29■□□□□ 0.04
PTCHD3-201ENST00000438700 RNF216Q9NWF9 866 aaPredicted RBP15.29■□□□□ 0.04
PTCHD3-201ENST00000438700 VAV3Q9UKW4 847 aa15.29■□□□□ 0.04
PTCHD3-201ENST00000438700 AFG3L2Q9Y4W6 797 aa15.29■□□□□ 0.04
PTCHD3-201ENST00000438700 SNCAIPQ9Y6H5 919 aa15.29■□□□□ 0.04
PTCHD3-201ENST00000438700 LRRC53A6NM62 1247 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 EIF3CLB5ME19 914 aaKnown RBP15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 CYP11B2P19099 503 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 PSMC6P62333 389 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 WHAMMP3Q1A5X7 153 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 CCDC40Q4G0X9 1142 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 ZCWPW2Q504Y3 356 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 DPY19L2Q6NUT2 758 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 RRAGAQ7L523 313 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 CATSPER3Q86XQ3 398 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 MCF2L2Q86YR7 1114 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 CCDC65Q8IXS2 484 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 CCDC170Q8IYT3 715 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 NOA1Q8NC60 698 aaKnown RBP15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 EIF3CQ99613 913 aaKnown RBP15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 ARHGAP20Q9P2F6 1191 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 PLAGL2Q9UPG8 496 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 PAPPA2Q9BXP8 1791 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 FKBP3Q00688 224 aaKnown RBP15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 PABPC4Q13310 644 aaKnown RBP eCLIP15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 TUBB2AQ13885 445 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 CEP55Q53EZ4 464 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 HAUS3Q68CZ6 603 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 SLC30A10Q6XR72 485 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 TUBB2BQ9BVA1 445 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 PSD3Q9NYI0 1048 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 TMOD4Q9NZQ9 345 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 COL4A3BPQ9Y5P4 624 aa15.28■□□□□ 0.04
PTCHD3-201ENST00000438700 CYP4A11Q02928 519 aa15.27■□□□□ 0.04
PTCHD3-201ENST00000438700 ERMNQ8TAM6 284 aa15.27■□□□□ 0.04
PTCHD3-201ENST00000438700 CAPZA3Q96KX2 299 aa15.27■□□□□ 0.04
PTCHD3-201ENST00000438700 DEF6Q9H4E7 631 aa15.27■□□□□ 0.04
PTCHD3-201ENST00000438700 PTPRFP10586 1907 aa15.27■□□□□ 0.04
PTCHD3-201ENST00000438700 LRRIQ3A6PVS8 624 aaPredicted RBP15.27■□□□□ 0.03
PTCHD3-201ENST00000438700 FDX1P10109 184 aa15.27■□□□□ 0.03
PTCHD3-201ENST00000438700 SLC12A3P55017 1021 aa15.27■□□□□ 0.03
PTCHD3-201ENST00000438700 SPA17Q15506 151 aa15.27■□□□□ 0.03
PTCHD3-201ENST00000438700 ARSHQ5FYA8 562 aa15.27■□□□□ 0.03
PTCHD3-201ENST00000438700 HDXQ7Z353 690 aa15.27■□□□□ 0.03
PTCHD3-201ENST00000438700 TRAPPC11Q7Z392 1133 aa15.27■□□□□ 0.03
PTCHD3-201ENST00000438700 SCFD1Q8WVM8 642 aa15.27■□□□□ 0.03
PTCHD3-201ENST00000438700 CCDC102AQ96A19 550 aa15.27■□□□□ 0.03
PTCHD3-201ENST00000438700 L3MBTL3Q96JM7 780 aaPredicted RBP15.27■□□□□ 0.03
PTCHD3-201ENST00000438700 CRACR2AQ9BSW2 395 aa15.27■□□□□ 0.03
PTCHD3-201ENST00000438700 POLD4Q9HCU8 107 aa15.27■□□□□ 0.03
PTCHD3-201ENST00000438700 RAB21Q9UL25 225 aa15.27■□□□□ 0.03
PTCHD3-201ENST00000438700 PCDHA2Q9Y5H9 948 aa15.27■□□□□ 0.03
PTCHD3-201ENST00000438700 RPTORQ8N122 1335 aa15.27■□□□□ 0.03
PTCHD3-201ENST00000438700 SLC26A4O43511 780 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 PPP1R12BO60237 982 aaPredicted RBP15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 DSG3P32926 999 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 EIF4A3P38919 411 aaKnown RBP15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 CASP5P51878 434 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 KIF11P52732 1056 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 GHRHRQ02643 423 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms