RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 FAM124AQ86V42 546 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 SKAP1Q86WV1 359 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 NIM1KQ8IY84 436 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 LGI4Q8N135 537 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 CLASRPQ8N2M8 674 aaKnown RBP4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 AFAP1L2Q8N4X5 818 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 FIBCD1Q8N539 461 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 PJA1Q8NG27 643 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 USP33Q8TEY7 942 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 ZNF296Q8WUU4 475 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 CPLX3Q8WVH0 158 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 NINJ1Q92982 152 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 SHDQ96IW2 340 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 ZDHHC15Q96MV8 337 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 CAMKK2Q96RR4 588 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 SMAD5Q99717 465 aaKnown RBP4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 SARGQ9BW04 601 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 SEZ6LQ9BYH1 1024 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 OBP2AQ9NY56 170 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 UBP1Q9NZI7 540 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 NUDT5Q9UKK9 219 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 E2F8A0AVK6 867 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 TNFRSF10CO14798 259 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 FIBPO43427 364 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 ORC4O43929 436 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 PDE8AO60658 829 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 NBNO60934 754 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 MTA2O94776 668 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 RHOBTB3O94955 611 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 TP53P04637 393 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 NBPF7P0C2Y1 421 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 GLI4P10075 376 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 IFNGR1P15260 489 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 TYRP1P17643 537 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 ZNF445P59923 1031 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 ZBED6P86452 979 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 KRTAP1-1Q07627 177 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 CACNB2Q08289 660 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 KIAA2012Q0VF49 1180 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 NEXNQ0ZGT2 675 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 MTMR1Q13613 665 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 MCTP2Q6DN12 878 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 PPP4R3AQ6IN85 833 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 CFAP161Q6P656 301 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 BORAQ6PGQ7 559 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 RASSF3Q86WH2 238 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 IFNL2Q8IZJ0 200 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 LZTR1Q8N653 840 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 FAM169BQ8N8A8 192 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 VPS37AQ8NEZ2 397 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 JPH3Q8WXH2 748 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 TIFAQ96CG3 184 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 PGBD4Q96DM1 585 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 PEX11GQ96HA9 241 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 FCRL3Q96P31 734 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 MYCBPQ99417 103 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 C1QTNF3Q9BXJ4 246 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 NOL6Q9H6R4 1146 aaKnown RBP4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 SAGE1Q9NXZ1 904 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 ACAD8Q9UKU7 415 aa4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 ISY1Q9ULR0 285 aaKnown RBP4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 SF3B6Q9Y3B4 125 aaKnown RBP4.37□□□□□ -1.71
HMGB1P12-201ENST00000438594 GSG1L2A8MUP6 293 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 VSTM5A8MXK1 200 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 SHOXO15266 292 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 GREM1O60565 184 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 ABLIM3O94929 683 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 EYA4O95677 639 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 CYP2C8P10632 490 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 CLK1P49759 484 aaKnown RBP4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 POU4F1Q01851 419 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 COL9A2Q14055 689 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 PPP2R5DQ14738 602 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 MTERF2Q49AM1 385 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 TNNI3KQ59H18 835 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 CRB2Q5IJ48 1285 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 TOGARAM2Q6ZUX3 1019 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 SPATC1Q76KD6 591 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 ZNF354CQ86Y25 554 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 PASD1Q8IV76 773 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 GOLGA1Q92805 767 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 NKD1Q969G9 470 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 TSPAN17Q96FV3 270 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 ELAC2Q9BQ52 826 aaKnown RBP4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 RHOBTB2Q9BYZ6 727 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 VPS11Q9H270 941 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 SLITRK6Q9H5Y7 841 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 GP6Q9HCN6 339 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 RIC8AQ9NPQ8 531 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 PLCB1Q9NQ66 1216 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 AASDHPPTQ9NRN7 309 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 PFDN2Q9UHV9 154 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 ZNF180Q9UJW8 692 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 SYNPO2Q9UMS6 1093 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 KDM2BQ8NHM5 1336 aa4.36□□□□□ -1.71
HMGB1P12-201ENST00000438594 ANO9A1A5B4 782 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 A6NCN8 305 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 MROH6A6NGR9 719 aa4.35□□□□□ -1.71
HMGB1P12-201ENST00000438594 CYR61O00622 381 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms