RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 PSMD10O75832 226 aa11.09□□□□□ -0.63
HDAC6-207ENST00000430858 MMP1P03956 469 aa11.09□□□□□ -0.63
HDAC6-207ENST00000430858 CTSHP09668 335 aa11.09□□□□□ -0.63
HDAC6-207ENST00000430858 WDR5P61964 334 aaKnown RBP11.09□□□□□ -0.63
HDAC6-207ENST00000430858 PLEKHG4Q58EX7 1191 aa11.09□□□□□ -0.63
HDAC6-207ENST00000430858 CKAP2LQ8IYA6 745 aa11.09□□□□□ -0.63
HDAC6-207ENST00000430858 DBF4BQ8NFT6 615 aa11.09□□□□□ -0.63
HDAC6-207ENST00000430858 RDM1Q8NG50 284 aa11.09□□□□□ -0.63
HDAC6-207ENST00000430858 ETNPPLQ8TBG4 499 aa11.09□□□□□ -0.63
HDAC6-207ENST00000430858 OXER1Q8TDS5 423 aa11.09□□□□□ -0.63
HDAC6-207ENST00000430858 DNAJB3Q8WWF6 145 aa11.09□□□□□ -0.63
HDAC6-207ENST00000430858 BBXQ8WY36 941 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-207ENST00000430858 SEPT8Q92599 483 aa11.09□□□□□ -0.63
HDAC6-207ENST00000430858 ZNF576Q9H609 170 aa11.09□□□□□ -0.63
HDAC6-207ENST00000430858 DISC1Q9NRI5 854 aa11.09□□□□□ -0.63
HDAC6-207ENST00000430858 GABBR1Q9UBS5 961 aa11.09□□□□□ -0.63
HDAC6-207ENST00000430858 IGSF9BQ9UPX0 1349 aa11.09□□□□□ -0.63
HDAC6-207ENST00000430858 SCN5AQ14524 2016 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 SMIM35A0A1B0GVV1 85 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 KIF28PB7ZC32 967 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 TBX3O15119 743 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 ST18O60284 1047 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 CCNT1O60563 726 aaKnown RBP11.08□□□□□ -0.64
HDAC6-207ENST00000430858 CHRNA1P02708 482 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 ATP4AP20648 1035 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 KLRC1P26715 233 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 RABGGTBP53611 331 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 HMGN5P82970 282 aaKnown RBP11.08□□□□□ -0.64
HDAC6-207ENST00000430858 MGAT3Q09327 533 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 NR5A1Q13285 461 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 ZNF484Q5JVG2 852 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 IER5Q5VY09 327 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 KRT40Q6A162 431 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 MTHFD1LQ6UB35 978 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 HERC6Q8IVU3 1022 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 NME8Q8N427 588 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 APBB2Q92870 758 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 TNFRSF25Q93038 417 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 FAM167AQ96KS9 214 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 FAM20AQ96MK3 541 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 CDX2Q99626 313 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-207ENST00000430858 NKX2-4Q9H2Z4 354 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 UNC45AQ9H3U1 944 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 SLC28A3Q9HAS3 691 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 CEP131Q9UPN4 1083 aa11.08□□□□□ -0.64
HDAC6-207ENST00000430858 YBX2Q9Y2T7 364 aaKnown RBP11.08□□□□□ -0.64
HDAC6-207ENST00000430858 TRIP12Q14669 1992 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-207ENST00000430858 BTBD18B2RXH4 712 aa11.07□□□□□ -0.64
HDAC6-207ENST00000430858 M0QZ92 97 aa11.07□□□□□ -0.64
HDAC6-207ENST00000430858 CHMP2AO43633 222 aa11.07□□□□□ -0.64
HDAC6-207ENST00000430858 SLC37A4O43826 429 aa11.07□□□□□ -0.64
HDAC6-207ENST00000430858 MRPS6P82932 125 aaKnown RBP11.07□□□□□ -0.64
HDAC6-207ENST00000430858 SAFBQ15424 915 aaKnown RBP eCLIP11.07□□□□□ -0.64
HDAC6-207ENST00000430858 TCTN1Q2MV58 587 aa11.07□□□□□ -0.64
HDAC6-207ENST00000430858 EARS2Q5JPH6 523 aaKnown RBP11.07□□□□□ -0.64
HDAC6-207ENST00000430858 B3GNT9Q6UX72 402 aa11.07□□□□□ -0.64
HDAC6-207ENST00000430858 MIER3Q7Z3K6 550 aa11.07□□□□□ -0.64
HDAC6-207ENST00000430858 DIS3L2Q8IYB7 885 aaKnown RBP11.07□□□□□ -0.64
HDAC6-207ENST00000430858 FAM184AQ8NB25 1140 aa11.07□□□□□ -0.64
HDAC6-207ENST00000430858 TRAPPC12Q8WVT3 735 aa11.07□□□□□ -0.64
HDAC6-207ENST00000430858 GJA10Q969M2 543 aa11.07□□□□□ -0.64
HDAC6-207ENST00000430858 ZBTB10Q96DT7 871 aa11.07□□□□□ -0.64
HDAC6-207ENST00000430858 IFIH1Q9BYX4 1025 aaKnown RBP11.07□□□□□ -0.64
HDAC6-207ENST00000430858 FAM49AQ9H0Q0 323 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-207ENST00000430858 KCNMB3Q9NPA1 279 aa11.07□□□□□ -0.64
HDAC6-207ENST00000430858 NRBP2Q9NSY0 501 aa11.07□□□□□ -0.64
HDAC6-207ENST00000430858 CDY2AQ9Y6F7 541 aa11.07□□□□□ -0.64
HDAC6-207ENST00000430858 SQORQ9Y6N5 450 aa11.07□□□□□ -0.64
HDAC6-207ENST00000430858 ZBTB42B2RXF5 422 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 MAGEB2O15479 319 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 TLL1O43897 1013 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 MARCH6O60337 910 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 AMHP03971 560 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 OATP04181 439 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 GHRP10912 638 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 MCM2P49736 904 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 DEFB103AP81534 67 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 PPP2R5CQ13362 524 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 MKRN4PQ13434 485 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-207ENST00000430858 GRIN2CQ14957 1233 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 FBXO47Q5MNV8 452 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 PPP2R2DQ66LE6 453 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 TSHZ1Q6ZSZ6 1077 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 SLFN12Q8IYM2 578 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 USP38Q8NB14 1042 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 C8orf76Q96K31 380 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 TBC1D32Q96NH3 1257 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 OSBPL7Q9BZF2 842 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 TRPV2Q9Y5S1 764 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 TET1Q8NFU7 2136 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 KDM3AQ9Y4C1 1321 aa11.06□□□□□ -0.64
HDAC6-207ENST00000430858 FAM205CA6NFA0 338 aa11.05□□□□□ -0.64
HDAC6-207ENST00000430858 ZNF862O60290 1169 aa11.05□□□□□ -0.64
HDAC6-207ENST00000430858 GJB5O95377 273 aa11.05□□□□□ -0.64
HDAC6-207ENST00000430858 BAG4O95429 457 aaKnown RBP11.05□□□□□ -0.64
HDAC6-207ENST00000430858 C22orf31O95567 290 aa11.05□□□□□ -0.64
HDAC6-207ENST00000430858 CA3P07451 260 aa11.05□□□□□ -0.64
HDAC6-207ENST00000430858 MYOGP15173 224 aa11.05□□□□□ -0.64
HDAC6-207ENST00000430858 FOSBP53539 338 aa11.05□□□□□ -0.64
HDAC6-207ENST00000430858 PRKCEQ02156 737 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms