RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 GJB6O95452 261 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 SPATA31D3P0C874 917 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 FDPSP14324 419 aaKnown RBP9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 HALP42357 657 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 CDK7P50613 346 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 EIF3BP55884 814 aaKnown RBP9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 CYLC2Q14093 348 aaPredicted RBP9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 UAP1Q16222 522 aaPredicted RBP9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 ZNF362Q5T0B9 420 aaPredicted RBP9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 FAAH2Q6GMR7 532 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 SLC2A7Q6PXP3 512 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 SPATA31D4Q6ZUB0 917 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 SPATA24Q86W54 205 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 UTP4Q969X6 686 aaKnown RBP9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 EXOC1Q9NV70 894 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 PCDH11XQ9BZA7 1347 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 SMIM31A0A1B0GVY4 71 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 TAF5LO75529 589 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 VAV1P15498 845 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 MARCKSP29966 332 aaPredicted RBP9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 MMP13P45452 471 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 DHX9Q08211 1270 aaKnown RBP9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 R3HDM1Q15032 1099 aaKnown RBP9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 PDIA6Q15084 440 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 SPDYCQ5MJ68 293 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 FKBP15Q5T1M5 1219 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 POTEEQ6S8J3 1075 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 DHX32Q7L7V1 743 aaKnown RBP9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 PROSER2Q86WR7 435 aaPredicted RBP9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 LRRC49Q8IUZ0 686 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 SCAIQ8N9R8 606 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 CLIP3Q96DZ5 547 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 DDX23Q9BUQ8 820 aaKnown RBP9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 LRMDAQ9H2I8 198 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 TXLNGQ9NUQ3 528 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 DDX43Q9NXZ2 648 aaKnown RBP9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 PTTG2Q9NZH5 202 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 DBF4Q9UBU7 674 aaPredicted RBP9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 USP20Q9Y2K6 914 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 MEGF6O75095 1541 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 MYH7BA7E2Y1 1941 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 RCCD1A6NED2 376 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 SH2B2O14492 632 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 LDHAP00338 332 aaKnown RBP9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 MYBP10242 640 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 CHN1P15882 459 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 RAB15P59190 212 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 PTPAQ15257 358 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 OLFML2BQ68BL8 750 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 LMOD2Q6P5Q4 547 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 UNC13DQ70J99 1090 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 MARK2Q7KZI7 788 aaKnown RBP9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 ALDH16A1Q8IZ83 802 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 CLASRPQ8N2M8 674 aaKnown RBP9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 DDX17Q92841 729 aaKnown RBP9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 ITPKCQ96DU7 683 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 KAZALD1Q96I82 304 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 MRPL46Q9H2W6 279 aaKnown RBP9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 ARHGEF38Q9NXL2 777 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 GLI3P10071 1580 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 GRID2IPA4D2P6 1211 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 LYNP07948 512 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 RASA1P20936 1047 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 RGS2P41220 211 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 PIP4K2AP48426 406 aaPredicted RBP9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 C1orf141Q5JVX7 400 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 WDR59Q6PJI9 974 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 C3orf67Q6ZVT6 689 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 GDAP1Q8TB36 358 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 MDM1Q8TC05 714 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 TAF4BQ92750 862 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 INPP5DQ92835 1189 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 DKK3Q9UBP4 350 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 CAPN11Q9UMQ6 739 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 ARL2BPQ9Y2Y0 163 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 NR2E3Q9Y5X4 410 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 USH1CQ9Y6N9 552 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 CAPN6Q9Y6Q1 641 aa9.6□□□□□ -0.87
CDC42BPA-206ENST00000429440 A0A0D9SFI3 127 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 ESYT3A0FGR9 886 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 DCDC2CA8MYV0 355 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 TTI1O43156 1089 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 SERPINB7O75635 380 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 GM2AP17900 193 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 NFKBIAP25963 317 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 SERPINB3P29508 390 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 KIF23Q02241 960 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 DCTN2Q13561 401 aaKnown RBP9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 TTLL12Q14166 644 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 PHLDB3Q6NSJ2 640 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 TBC1D16Q8TBP0 767 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 LRRC8CQ8TDW0 803 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 SYNCQ9H7C4 482 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 ETNK1Q9HBU6 452 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 RABL2AQ9UBK7 228 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 SAP30BPQ9UHR5 308 aaKnown RBP9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 CARD8Q9Y2G2 431 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 MAP3K2Q9Y2U5 619 aa9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 FAM32AQ9Y421 112 aaKnown RBP9.59□□□□□ -0.87
CDC42BPA-206ENST00000429440 TIMM22Q9Y584 194 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms