RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 SEPT9Q9UHD8 586 aaPredicted RBP10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 MAN1B1Q9UKM7 699 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 PCDHA10Q9Y5I2 948 aa10.63□□□□□ -0.71
HMGCLL1-206ENST00000428842 ASB14A6NK59 587 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 ADCY3O60266 1144 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 YWHABP31946 246 aaKnown RBP10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 LBX1P52954 281 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 SLC12A3P55017 1021 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 ASIC1P78348 528 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 ZNF200P98182 395 aaPredicted RBP10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 STK4Q13043 487 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 HIC1Q14526 733 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 SH3RF1Q7Z6J0 888 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 RAET1EQ8TD07 263 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 REEP2Q9BRK0 252 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 FUCA2Q9BTY2 467 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 TRIM9Q9C026 710 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 ZCCHC17Q9NP64 241 aaKnown RBP10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 TBC1D22BQ9NU19 505 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 WBP1LQ9NX94 342 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 PNMA2Q9UL42 364 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 WDR64B1ANS9 1081 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 KLRC4O43908 158 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 CYP11B2P19099 503 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 TTLL4Q14679 1199 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 MCTP2Q6DN12 878 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 LRRC71Q8N4P6 559 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 SCFD2Q8WU76 684 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 AK8Q96MA6 479 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 BEGAINQ9BUH8 593 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 RAB34Q9BZG1 259 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 ABHD16BQ9H3Z7 469 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 KBTBD4Q9NVX7 518 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 CCDC39Q9UFE4 941 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 SRRDQ9UH36 339 aa10.62□□□□□ -0.71
HMGCLL1-206ENST00000428842 TRIM49BA6NDI0 452 aa10.61□□□□□ -0.71
HMGCLL1-206ENST00000428842 TISP43B9A030 160 aa10.61□□□□□ -0.71
HMGCLL1-206ENST00000428842 STBD1O95210 358 aa10.61□□□□□ -0.71
HMGCLL1-206ENST00000428842 C6orf222P0C671 652 aaPredicted RBP10.61□□□□□ -0.71
HMGCLL1-206ENST00000428842 SUPT20HL2P0C7V6 817 aa10.61□□□□□ -0.71
HMGCLL1-206ENST00000428842 QARSP47897 775 aaKnown RBP10.61□□□□□ -0.71
HMGCLL1-206ENST00000428842 PMS1P54277 932 aaKnown RBP10.61□□□□□ -0.71
HMGCLL1-206ENST00000428842 TMEM62Q0P6H9 643 aa10.61□□□□□ -0.71
HMGCLL1-206ENST00000428842 KMT5BQ4FZB7 885 aa10.61□□□□□ -0.71
HMGCLL1-206ENST00000428842 ZC2HC1CQ53FD0 456 aaPredicted RBP10.61□□□□□ -0.71
HMGCLL1-206ENST00000428842 XKR9Q5GH70 373 aa10.61□□□□□ -0.71
HMGCLL1-206ENST00000428842 METTL7BQ6UX53 244 aa10.61□□□□□ -0.71
HMGCLL1-206ENST00000428842 TLK2Q86UE8 772 aa10.61□□□□□ -0.71
HMGCLL1-206ENST00000428842 OR6J1Q8NGC5 347 aa10.61□□□□□ -0.71
HMGCLL1-206ENST00000428842 MORC4Q8TE76 937 aa10.61□□□□□ -0.71
HMGCLL1-206ENST00000428842 TMEM143Q96AN5 459 aa10.61□□□□□ -0.71
HMGCLL1-206ENST00000428842 MYH11P35749 1972 aa10.61□□□□□ -0.71
HMGCLL1-206ENST00000428842 FKTNO75072 461 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 ICAM3P32942 547 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 COPB2P35606 906 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 PLCB2Q00722 1185 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 EPHA7Q15375 998 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 RINT1Q6NUQ1 792 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 NIPA1Q7RTP0 329 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 DNAJC19Q96DA6 116 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 NAP1L5Q96NT1 182 aaPredicted RBP10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 ZNF302Q9NR11 478 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 DNM3Q9UQ16 869 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 AP5Z1O43299 807 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 RPN1P04843 607 aaKnown RBP10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 P4HBP07237 508 aaKnown RBP10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 HOXC6P09630 235 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 RARRES1P49788 294 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 KIF22Q14807 665 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 CXCL17Q6UXB2 119 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 SV2BQ7L1I2 683 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 DAW1Q8N136 415 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 SYAP1Q96A49 352 aaPredicted RBP10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 CEP170P1Q96L14 293 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 NAP1L4Q99733 375 aaKnown RBP10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 SUGCTQ9HAC7 445 aa10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 GNEQ9Y223 722 aaKnown RBP10.6□□□□□ -0.71
HMGCLL1-206ENST00000428842 CTAGE5O15320 804 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 INHAP05111 366 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 KRT18P05783 430 aaKnown RBP10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 CYBAP13498 195 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 NMT1P30419 496 aaKnown RBP10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 STAT5BP51692 787 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 KRT76Q01546 638 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 DUSP28Q4G0W2 176 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 HAUS3Q68CZ6 603 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 NELFCDQ8IXH7 590 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 KIAA0895Q8NCT3 520 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 BSNDQ8WZ55 320 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 SMARCE1Q969G3 411 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 CHD9Q3L8U1 2897 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 ZBTB42B2RXF5 422 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 LGALS2P05162 132 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 MMP3P08254 477 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 ORC2Q13416 577 aaPredicted RBP10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 GIT2Q14161 759 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 NEDD9Q14511 834 aa10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 ZNF746Q6NUN9 644 aaPredicted RBP10.59□□□□□ -0.71
HMGCLL1-206ENST00000428842 XRRA1Q6P2D8 792 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms