RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 TMEM260Q9NX78 707 aa17.57■□□□□ 0.4
CTDSP1-202ENST00000428361 TRPV2Q9Y5S1 764 aa17.57■□□□□ 0.4
CTDSP1-202ENST00000428361 CYP46A1Q9Y6A2 500 aa17.57■□□□□ 0.4
CTDSP1-202ENST00000428361 IGKV6D-21A0A0A0MT36 114 aa17.56■□□□□ 0.4
CTDSP1-202ENST00000428361 CPA1P15085 419 aa17.56■□□□□ 0.4
CTDSP1-202ENST00000428361 EVCP57679 992 aa17.56■□□□□ 0.4
CTDSP1-202ENST00000428361 KRT76Q01546 638 aa17.56■□□□□ 0.4
CTDSP1-202ENST00000428361 EPC2Q52LR7 807 aa17.56■□□□□ 0.4
CTDSP1-202ENST00000428361 ZNF746Q6NUN9 644 aaPredicted RBP17.56■□□□□ 0.4
CTDSP1-202ENST00000428361 PDXDC2PQ6P474 469 aa17.56■□□□□ 0.4
CTDSP1-202ENST00000428361 RUFY3Q7L099 469 aa17.56■□□□□ 0.4
CTDSP1-202ENST00000428361 FAM177A1Q8N128 213 aaPredicted RBP17.56■□□□□ 0.4
CTDSP1-202ENST00000428361 FIBCD1Q8N539 461 aa17.56■□□□□ 0.4
CTDSP1-202ENST00000428361 ATP8B4Q8TF62 1192 aa17.56■□□□□ 0.4
CTDSP1-202ENST00000428361 MRPL38Q96DV4 380 aaKnown RBP17.56■□□□□ 0.4
CTDSP1-202ENST00000428361 ZNF302Q9NR11 478 aa17.56■□□□□ 0.4
CTDSP1-202ENST00000428361 CEP131Q9UPN4 1083 aa17.56■□□□□ 0.4
CTDSP1-202ENST00000428361 KDM3AQ9Y4C1 1321 aa17.55■□□□□ 0.4
CTDSP1-202ENST00000428361 FAM86B1E9PN63 330 aa17.55■□□□□ 0.4
CTDSP1-202ENST00000428361 CPLX1O14810 134 aa17.55■□□□□ 0.4
CTDSP1-202ENST00000428361 RB1P06400 928 aa17.55■□□□□ 0.4
CTDSP1-202ENST00000428361 FAM86B2P0C5J1 330 aa17.55■□□□□ 0.4
CTDSP1-202ENST00000428361 ZNF484Q5JVG2 852 aa17.55■□□□□ 0.4
CTDSP1-202ENST00000428361 KRT40Q6A162 431 aa17.55■□□□□ 0.4
CTDSP1-202ENST00000428361 ABHD15Q6UXT9 468 aa17.55■□□□□ 0.4
CTDSP1-202ENST00000428361 TMEM192Q8IY95 271 aa17.55■□□□□ 0.4
CTDSP1-202ENST00000428361 CRYGNQ8WXF5 182 aa17.55■□□□□ 0.4
CTDSP1-202ENST00000428361 C17orf80Q9BSJ5 609 aa17.55■□□□□ 0.4
CTDSP1-202ENST00000428361 SLC26A6Q9BXS9 759 aa17.55■□□□□ 0.4
CTDSP1-202ENST00000428361 ADGRA3Q8IWK6 1321 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 IGSF9BQ9UPX0 1349 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 IGLV3-22A0A075B6J6 115 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 H3BNC9 293 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 DDX39AO00148 427 aaKnown RBP17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 PSAPP07602 524 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 STAG3L1P0CL83 205 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 BMP1P13497 986 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 CIITAP33076 1130 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 TFF2Q03403 129 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 PAK2Q13177 524 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 PKN1Q16512 942 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 MTHFD1LQ6UB35 978 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 SPRED2Q7Z698 418 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 CKAP2LQ8IYA6 745 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 ZNF710Q8N1W2 664 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 BBXQ8WY36 941 aaPredicted RBP17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 PHKBQ93100 1093 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 FAM167AQ96KS9 214 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 C11orf84Q9BUA3 381 aaPredicted RBP17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 CELF4Q9BZC1 486 aaKnown RBP17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 TM6SF1Q9BZW5 370 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 ZSWIM6Q9HCJ5 1215 aa17.54■□□□□ 0.4
CTDSP1-202ENST00000428361 ENPP3O14638 875 aa17.53■□□□□ 0.4
CTDSP1-202ENST00000428361 EIF5BO60841 1220 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-202ENST00000428361 PDIA3P30101 505 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-202ENST00000428361 USP11P51784 963 aa17.53■□□□□ 0.4
CTDSP1-202ENST00000428361 NLRP5P59047 1200 aa17.53■□□□□ 0.4
CTDSP1-202ENST00000428361 SSRP1Q08945 709 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-202ENST00000428361 GPM6BQ13491 265 aa17.53■□□□□ 0.4
CTDSP1-202ENST00000428361 NTRK3Q16288 839 aa17.53■□□□□ 0.4
CTDSP1-202ENST00000428361 PRR16Q569H4 304 aa17.53■□□□□ 0.4
CTDSP1-202ENST00000428361 ZNF274Q96GC6 653 aaPredicted RBP17.53■□□□□ 0.4
CTDSP1-202ENST00000428361 LMAN2LQ9H0V9 348 aa17.53■□□□□ 0.4
CTDSP1-202ENST00000428361 PCDHA10Q9Y5I2 948 aa17.53■□□□□ 0.4
CTDSP1-202ENST00000428361 RALGAPA2Q2PPJ7 1873 aa17.52■□□□□ 0.4
CTDSP1-202ENST00000428361 SPTBN5Q9NRC6 3674 aaKnown RBP17.52■□□□□ 0.4
CTDSP1-202ENST00000428361 WDR64B1ANS9 1081 aa17.52■□□□□ 0.4
CTDSP1-202ENST00000428361 C5orf67F2Z3F1 127 aa17.52■□□□□ 0.4
CTDSP1-202ENST00000428361 NCK2O43639 380 aa17.52■□□□□ 0.4
CTDSP1-202ENST00000428361 CCNE2O96020 404 aa17.52■□□□□ 0.4
CTDSP1-202ENST00000428361 KLRC1P26715 233 aa17.52■□□□□ 0.4
CTDSP1-202ENST00000428361 CD52P31358 61 aa17.52■□□□□ 0.4
CTDSP1-202ENST00000428361 CTNNB1P35222 781 aa17.52■□□□□ 0.4
CTDSP1-202ENST00000428361 BTG3Q14201 252 aaPredicted RBP17.52■□□□□ 0.4
CTDSP1-202ENST00000428361 GALNT17Q6IS24 598 aa17.52■□□□□ 0.4
CTDSP1-202ENST00000428361 SWSAP1Q6NVH7 229 aa17.52■□□□□ 0.4
CTDSP1-202ENST00000428361 NPAS4Q8IUM7 802 aa17.52■□□□□ 0.4
CTDSP1-202ENST00000428361 CCDC60Q8IWA6 550 aaPredicted RBP17.52■□□□□ 0.4
CTDSP1-202ENST00000428361 PLVAPQ9BX97 442 aa17.52■□□□□ 0.4
CTDSP1-202ENST00000428361 OSBPL7Q9BZF2 842 aa17.52■□□□□ 0.4
CTDSP1-202ENST00000428361 SAMM50Q9Y512 469 aa17.52■□□□□ 0.4
CTDSP1-202ENST00000428361 MAGEB2O15479 319 aa17.51■□□□□ 0.39
CTDSP1-202ENST00000428361 DHX15O43143 795 aaKnown RBP17.51■□□□□ 0.39
CTDSP1-202ENST00000428361 CDKL5O76039 1030 aa17.51■□□□□ 0.39
CTDSP1-202ENST00000428361 DEXIO95424 95 aa17.51■□□□□ 0.39
CTDSP1-202ENST00000428361 KCNQ1P51787 676 aa17.51■□□□□ 0.39
CTDSP1-202ENST00000428361 CCT2P78371 535 aaKnown RBP17.51■□□□□ 0.39
CTDSP1-202ENST00000428361 PUS10Q3MIT2 529 aaKnown RBP17.51■□□□□ 0.39
CTDSP1-202ENST00000428361 BANK1Q8NDB2 785 aa17.51■□□□□ 0.39
CTDSP1-202ENST00000428361 RIT2Q99578 217 aa17.51■□□□□ 0.39
CTDSP1-202ENST00000428361 NSUN3Q9H649 340 aaKnown RBP17.51■□□□□ 0.39
CTDSP1-202ENST00000428361 UBE2ZQ9H832 354 aaPredicted RBP17.51■□□□□ 0.39
CTDSP1-202ENST00000428361 VPS54Q9P1Q0 977 aa17.51■□□□□ 0.39
CTDSP1-202ENST00000428361 PADI3Q9ULW8 664 aa17.51■□□□□ 0.39
CTDSP1-202ENST00000428361 FAM50BQ9Y247 325 aa17.51■□□□□ 0.39
CTDSP1-202ENST00000428361 MAFBQ9Y5Q3 323 aaPredicted RBP17.51■□□□□ 0.39
CTDSP1-202ENST00000428361 TTC3P53804 2025 aa17.5■□□□□ 0.39
CTDSP1-202ENST00000428361 GPR182O15218 404 aa17.5■□□□□ 0.39
CTDSP1-202ENST00000428361 XBP1P17861 261 aa17.5■□□□□ 0.39
CTDSP1-202ENST00000428361 TMOD1P28289 359 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms