RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 TCEAL5Q5H9L2 206 aa19.84■□□□□ 0.77
DDR1-235ENST00000428153 TMEM31Q5JXX7 168 aa19.84■□□□□ 0.77
DDR1-235ENST00000428153 PTCRAQ6ISU1 281 aaPredicted RBP19.84■□□□□ 0.77
DDR1-235ENST00000428153 POTEBQ6S5H4 581 aa19.84■□□□□ 0.77
DDR1-235ENST00000428153 NPAS4Q8IUM7 802 aa19.84■□□□□ 0.77
DDR1-235ENST00000428153 P2RX5Q93086 422 aa19.84■□□□□ 0.77
DDR1-235ENST00000428153 AGO3Q9H9G7 860 aaKnown RBP19.84■□□□□ 0.77
DDR1-235ENST00000428153 FAM217BQ9NTX9 383 aaPredicted RBP19.84■□□□□ 0.77
DDR1-235ENST00000428153 COL1A2P08123 1366 aa19.83■□□□□ 0.77
DDR1-235ENST00000428153 HBP1O60381 514 aa19.83■□□□□ 0.77
DDR1-235ENST00000428153 CYP3A4P08684 503 aa19.83■□□□□ 0.77
DDR1-235ENST00000428153 STAG3L1P0CL83 205 aa19.83■□□□□ 0.77
DDR1-235ENST00000428153 BTG3Q14201 252 aaPredicted RBP19.83■□□□□ 0.77
DDR1-235ENST00000428153 ADCK5Q3MIX3 580 aa19.83■□□□□ 0.77
DDR1-235ENST00000428153 CMTR2Q8IYT2 770 aaKnown RBP19.83■□□□□ 0.77
DDR1-235ENST00000428153 RASEFQ8IZ41 740 aa19.83■□□□□ 0.77
DDR1-235ENST00000428153 GJD3Q8N144 294 aa19.83■□□□□ 0.77
DDR1-235ENST00000428153 FBXL16Q8N461 479 aa19.83■□□□□ 0.77
DDR1-235ENST00000428153 CRYGNQ8WXF5 182 aa19.83■□□□□ 0.77
DDR1-235ENST00000428153 LRFN3Q9BTN0 628 aa19.83■□□□□ 0.77
DDR1-235ENST00000428153 CELF4Q9BZC1 486 aaKnown RBP19.83■□□□□ 0.77
DDR1-235ENST00000428153 RNF216Q9NWF9 866 aaPredicted RBP19.83■□□□□ 0.77
DDR1-235ENST00000428153 PRKAG3Q9UGI9 489 aa19.83■□□□□ 0.77
DDR1-235ENST00000428153 KLF18A0A0U1RQI7 1052 aa19.82■□□□□ 0.76
DDR1-235ENST00000428153 RBAK-RBAKDNI3L0D1 243 aa19.82■□□□□ 0.76
DDR1-235ENST00000428153 CDC45O75419 566 aa19.82■□□□□ 0.76
DDR1-235ENST00000428153 CD52P31358 61 aa19.82■□□□□ 0.76
DDR1-235ENST00000428153 PFKFB3Q16875 520 aaPredicted RBP19.82■□□□□ 0.76
DDR1-235ENST00000428153 CTC1Q2NKJ3 1217 aa19.82■□□□□ 0.76
DDR1-235ENST00000428153 FAM160B1Q5W0V3 765 aa19.82■□□□□ 0.76
DDR1-235ENST00000428153 MTHFD1LQ6UB35 978 aa19.82■□□□□ 0.76
DDR1-235ENST00000428153 ABHD15Q6UXT9 468 aa19.82■□□□□ 0.76
DDR1-235ENST00000428153 CCDC12Q8WUD4 166 aaPredicted RBP19.82■□□□□ 0.76
DDR1-235ENST00000428153 LINC01599Q8WXQ3 324 aa19.82■□□□□ 0.76
DDR1-235ENST00000428153 KCNB2Q92953 911 aa19.82■□□□□ 0.76
DDR1-235ENST00000428153 ZMYND12Q9H0C1 365 aa19.82■□□□□ 0.76
DDR1-235ENST00000428153 FAM49AQ9H0Q0 323 aaPredicted RBP19.82■□□□□ 0.76
DDR1-235ENST00000428153 PADI3Q9ULW8 664 aa19.82■□□□□ 0.76
DDR1-235ENST00000428153 NID2Q14112 1375 aa19.82■□□□□ 0.76
DDR1-235ENST00000428153 MMP1P03956 469 aa19.81■□□□□ 0.76
DDR1-235ENST00000428153 IL9P15248 144 aa19.81■□□□□ 0.76
DDR1-235ENST00000428153 CDC27P30260 824 aa19.81■□□□□ 0.76
DDR1-235ENST00000428153 ZNF76P36508 570 aa19.81■□□□□ 0.76
DDR1-235ENST00000428153 PLA2G5P39877 138 aa19.81■□□□□ 0.76
DDR1-235ENST00000428153 SETQ01105 290 aaPredicted RBP19.81■□□□□ 0.76
DDR1-235ENST00000428153 PAK2Q13177 524 aa19.81■□□□□ 0.76
DDR1-235ENST00000428153 ODR4Q5SWX8 454 aa19.81■□□□□ 0.76
DDR1-235ENST00000428153 ATP8B4Q8TF62 1192 aa19.81■□□□□ 0.76
DDR1-235ENST00000428153 PGBD1Q96JS3 809 aa19.81■□□□□ 0.76
DDR1-235ENST00000428153 TCEANC2Q96MN5 208 aa19.81■□□□□ 0.76
DDR1-235ENST00000428153 CD320Q9NPF0 282 aa19.81■□□□□ 0.76
DDR1-235ENST00000428153 SCG2P13521 617 aa19.8■□□□□ 0.76
DDR1-235ENST00000428153 METAP2P50579 478 aaKnown RBP eCLIP19.8■□□□□ 0.763e-6■■■■□ 25.7
DDR1-235ENST00000428153 KRT76Q01546 638 aa19.8■□□□□ 0.76
DDR1-235ENST00000428153 ZNF484Q5JVG2 852 aa19.8■□□□□ 0.76
DDR1-235ENST00000428153 RTN4RL1Q86UN2 441 aaPredicted RBP19.8■□□□□ 0.76
DDR1-235ENST00000428153 KHSRPQ92945 711 aaKnown RBP eCLIP19.8■□□□□ 0.76
DDR1-235ENST00000428153 TBC1D22BQ9NU19 505 aa19.8■□□□□ 0.76
DDR1-235ENST00000428153 HCN4Q9Y3Q4 1203 aa19.8■□□□□ 0.76
DDR1-235ENST00000428153 IGLV3-22A0A075B6J6 115 aa19.79■□□□□ 0.76
DDR1-235ENST00000428153 FAM86B1E9PN63 330 aa19.79■□□□□ 0.76
DDR1-235ENST00000428153 H3BQ06 376 aaPredicted RBP19.79■□□□□ 0.76
DDR1-235ENST00000428153 IPO5O00410 1097 aaKnown RBP19.79■□□□□ 0.76
DDR1-235ENST00000428153 GRM6O15303 877 aa19.79■□□□□ 0.76
DDR1-235ENST00000428153 DHX15O43143 795 aaKnown RBP19.79■□□□□ 0.76
DDR1-235ENST00000428153 CCNE2O96020 404 aa19.79■□□□□ 0.76
DDR1-235ENST00000428153 FAM86B2P0C5J1 330 aa19.79■□□□□ 0.76
DDR1-235ENST00000428153 ALADP13716 330 aa19.79■□□□□ 0.76
DDR1-235ENST00000428153 GNA11P29992 359 aa19.79■□□□□ 0.76
DDR1-235ENST00000428153 FGD1P98174 961 aa19.79■□□□□ 0.76
DDR1-235ENST00000428153 ZNF746Q6NUN9 644 aaPredicted RBP19.79■□□□□ 0.76
DDR1-235ENST00000428153 MIS18BP1Q6P0N0 1132 aa19.79■□□□□ 0.76
DDR1-235ENST00000428153 PLA2G4DQ86XP0 818 aa19.79■□□□□ 0.76
DDR1-235ENST00000428153 TRAPPC12Q8WVT3 735 aa19.79■□□□□ 0.76
DDR1-235ENST00000428153 PPP2R3CQ969Q6 453 aa19.79■□□□□ 0.76
DDR1-235ENST00000428153 TMEM260Q9NX78 707 aa19.79■□□□□ 0.76
DDR1-235ENST00000428153 CLDND1Q9NY35 253 aa19.79■□□□□ 0.76
DDR1-235ENST00000428153 BACH1O14867 736 aa19.78■□□□□ 0.76
DDR1-235ENST00000428153 KLRC1P26715 233 aa19.78■□□□□ 0.76
DDR1-235ENST00000428153 ADD1P35611 737 aaKnown RBP19.78■□□□□ 0.76
DDR1-235ENST00000428153 PDXDC2PQ6P474 469 aa19.78■□□□□ 0.76
DDR1-235ENST00000428153 CCDC60Q8IWA6 550 aaPredicted RBP19.78■□□□□ 0.76
DDR1-235ENST00000428153 SMAP1Q8IYB5 467 aaPredicted RBP19.78■□□□□ 0.76
DDR1-235ENST00000428153 ZNF710Q8N1W2 664 aa19.78■□□□□ 0.76
DDR1-235ENST00000428153 ZBTB10Q96DT7 871 aa19.78■□□□□ 0.76
DDR1-235ENST00000428153 FAM122AQ96E09 287 aa19.78■□□□□ 0.76
DDR1-235ENST00000428153 AGXT2Q9BYV1 514 aa19.78■□□□□ 0.76
DDR1-235ENST00000428153 C6orf50Q9HD87 102 aa19.78■□□□□ 0.76
DDR1-235ENST00000428153 C11orf16Q9NQ32 467 aa19.78■□□□□ 0.76
DDR1-235ENST00000428153 ZNF302Q9NR11 478 aa19.78■□□□□ 0.76
DDR1-235ENST00000428153 RAPGEFL1Q9UHV5 662 aa19.78■□□□□ 0.76
DDR1-235ENST00000428153 PLAGL2Q9UPG8 496 aa19.78■□□□□ 0.76
DDR1-235ENST00000428153 MAFBQ9Y5Q3 323 aaPredicted RBP19.78■□□□□ 0.76
DDR1-235ENST00000428153 ATG2AQ2TAZ0 1938 aa19.78■□□□□ 0.76
DDR1-235ENST00000428153 LOXHD1Q8IVV2 1947 aa19.78■□□□□ 0.76
DDR1-235ENST00000428153 PRPF3O43395 683 aaKnown RBP19.77■□□□□ 0.76
DDR1-235ENST00000428153 CIITAP33076 1130 aa19.77■□□□□ 0.76
DDR1-235ENST00000428153 LTBRP36941 435 aa19.77■□□□□ 0.76
DDR1-235ENST00000428153 SARSP49591 514 aaKnown RBP19.77■□□□□ 0.76
DDR1-235ENST00000428153 TMEM62Q0P6H9 643 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms