RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 GOLGA6L10A6NI86 522 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 SPDYE3A6NKU9 549 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 SFI1A8K8P3 1242 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 H3BRB1 525 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 NKRFO15226 690 aaKnown RBP eCLIP6.68□□□□□ -1.34
CHD2-202ENST00000420239 ZPR1O75312 459 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 MYL1P05976 194 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 MYBL1P10243 752 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 NQO1P15559 274 aaKnown RBP6.68□□□□□ -1.34
CHD2-202ENST00000420239 MCAMP43121 646 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 CTCFP49711 727 aaPredicted RBP6.68□□□□□ -1.34
CHD2-202ENST00000420239 KIF11P52732 1056 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 MAGOHP61326 146 aaKnown RBP6.68□□□□□ -1.34
CHD2-202ENST00000420239 NCALDP61601 193 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 TRIM28Q13263 835 aaKnown RBP6.68□□□□□ -1.34
CHD2-202ENST00000420239 BIRC3Q13489 604 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 SPA17Q15506 151 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 AKNAD1Q5T1N1 836 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 TTI2Q6NXR4 508 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 ARMC9Q7Z3E5 817 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 DZIP3Q86Y13 1208 aaKnown RBP6.68□□□□□ -1.34
CHD2-202ENST00000420239 ZSCAN29Q8IWY8 852 aaPredicted RBP6.68□□□□□ -1.34
CHD2-202ENST00000420239 IFNL3Q8IZI9 196 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 CMTR1Q8N1G2 835 aaKnown RBP6.68□□□□□ -1.34
CHD2-202ENST00000420239 NBPF15Q8N660 670 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 FANCBQ8NB91 859 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 TPCN2Q8NHX9 752 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 MDM1Q8TC05 714 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 MAGOHBQ96A72 148 aaKnown RBP6.68□□□□□ -1.34
CHD2-202ENST00000420239 INPP4AQ96PE3 977 aaPredicted RBP6.68□□□□□ -1.34
CHD2-202ENST00000420239 ALS2CR12Q96Q35 445 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 XPO6Q96QU8 1125 aaKnown RBP6.68□□□□□ -1.34
CHD2-202ENST00000420239 TUT1Q9H6E5 874 aaKnown RBP6.68□□□□□ -1.34
CHD2-202ENST00000420239 PIDD1Q9HB75 910 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 EPB41L4AQ9HCS5 686 aaPredicted RBP6.68□□□□□ -1.34
CHD2-202ENST00000420239 EXOC1Q9NV70 894 aa6.68□□□□□ -1.34
CHD2-202ENST00000420239 COL18A1P39060 1754 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 AFF2P51816 1311 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 GRID2IPA4D2P6 1211 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 EPHB6O15197 1021 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 KLRC4O43908 158 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 NEFHP12036 1026 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 FERP16591 822 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 XBP1P17861 261 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 TRIM21P19474 475 aaKnown RBP6.67□□□□□ -1.34
CHD2-202ENST00000420239 FLT3P36888 993 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 EIF4A3P38919 411 aaKnown RBP6.67□□□□□ -1.34
CHD2-202ENST00000420239 GCLCP48506 637 aaPredicted RBP6.67□□□□□ -1.34
CHD2-202ENST00000420239 CEBPAP49715 358 aaPredicted RBP6.67□□□□□ -1.34
CHD2-202ENST00000420239 SEC13P55735 322 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 ROR2Q01974 943 aaKnown RBP6.67□□□□□ -1.34
CHD2-202ENST00000420239 MAP3K12Q12852 859 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 TCIRG1Q13488 830 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 WTAPQ15007 396 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 NPY5RQ15761 445 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 KCTD19Q17RG1 926 aaPredicted RBP6.67□□□□□ -1.34
CHD2-202ENST00000420239 COBLL1Q53SF7 1204 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 FAM133BQ5BKY9 247 aaKnown RBP6.67□□□□□ -1.34
CHD2-202ENST00000420239 TTC38Q5R3I4 469 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 ANKRD20A2Q5SQ80 823 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 ERMARDQ5T6L9 678 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 ANKRD20A1Q5TYW2 823 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 ANKRD20A3Q5VUR7 823 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 PI16Q6UXB8 463 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 TAS1R3Q7RTX0 852 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 TMC4Q7Z404 712 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 CPLX4Q7Z7G2 160 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 IFNL2Q8IZJ0 200 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 RNF10Q8N5U6 811 aaKnown RBP6.67□□□□□ -1.34
CHD2-202ENST00000420239 ANKRD13CQ8N6S4 541 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 CHMP6Q96FZ7 201 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 DHTKD1Q96HY7 919 aaPredicted RBP6.67□□□□□ -1.34
CHD2-202ENST00000420239 ZNF317Q96PQ6 595 aaPredicted RBP6.67□□□□□ -1.34
CHD2-202ENST00000420239 DUSP9Q99956 384 aaKnown RBP6.67□□□□□ -1.34
CHD2-202ENST00000420239 ABCF3Q9NUQ8 709 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 WBP1LQ9NX94 342 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 PLAGL2Q9UPG8 496 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 ZNF532Q9HCE3 1301 aa6.67□□□□□ -1.34
CHD2-202ENST00000420239 PLCH1Q4KWH8 1693 aa6.66□□□□□ -1.34
CHD2-202ENST00000420239 A0A1B0GVG6 124 aa6.66□□□□□ -1.34
CHD2-202ENST00000420239 DPPA5A6NC42 116 aa6.66□□□□□ -1.34
CHD2-202ENST00000420239 TTC36A6NLP5 189 aa6.66□□□□□ -1.34
CHD2-202ENST00000420239 BUB1O43683 1085 aa6.66□□□□□ -1.34
CHD2-202ENST00000420239 RHOBTB3O94955 611 aa6.66□□□□□ -1.34
CHD2-202ENST00000420239 RARAP10276 462 aa6.66□□□□□ -1.34
CHD2-202ENST00000420239 PDE6AP16499 860 aa6.66□□□□□ -1.34
CHD2-202ENST00000420239 KCNA6P17658 529 aa6.66□□□□□ -1.34
CHD2-202ENST00000420239 PPP1R2P41236 205 aa6.66□□□□□ -1.34
CHD2-202ENST00000420239 PAPOLAP51003 745 aaKnown RBP6.66□□□□□ -1.34
CHD2-202ENST00000420239 ITIH4Q14624 930 aa6.66□□□□□ -1.34
CHD2-202ENST00000420239 SEC23AQ15436 765 aa6.66□□□□□ -1.34
CHD2-202ENST00000420239 CFAP221Q4G0U5 840 aa6.66□□□□□ -1.34
CHD2-202ENST00000420239 MIIPQ5JXC2 388 aa6.66□□□□□ -1.34
CHD2-202ENST00000420239 ARL6IP4Q66PJ3 421 aaKnown RBP6.66□□□□□ -1.34
CHD2-202ENST00000420239 ARHGAP27Q6ZUM4 889 aa6.66□□□□□ -1.34
CHD2-202ENST00000420239 MAEAQ7L5Y9 396 aa6.66□□□□□ -1.34
CHD2-202ENST00000420239 DDX42Q86XP3 938 aaKnown RBP eCLIP6.66□□□□□ -1.34
CHD2-202ENST00000420239 ZNF654Q8IZM8 581 aa6.66□□□□□ -1.34
CHD2-202ENST00000420239 TTC5Q8N0Z6 440 aa6.66□□□□□ -1.34
CHD2-202ENST00000420239 ATXN2LQ8WWM7 1075 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms