RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 SCG2P13521 617 aa19.68■□□□□ 0.74
PTCD1-202ENST00000419981 ADD1P35611 737 aaKnown RBP19.68■□□□□ 0.74
PTCD1-202ENST00000419981 APOBRQ0VD83 1088 aa19.68■□□□□ 0.74
PTCD1-202ENST00000419981 BTG3Q14201 252 aaPredicted RBP19.68■□□□□ 0.74
PTCD1-202ENST00000419981 TCEAL5Q5H9L2 206 aa19.68■□□□□ 0.74
PTCD1-202ENST00000419981 JAKMIP3Q5VZ66 844 aa19.68■□□□□ 0.74
PTCD1-202ENST00000419981 FAM160B1Q5W0V3 765 aa19.68■□□□□ 0.74
PTCD1-202ENST00000419981 PLA2G4DQ86XP0 818 aa19.68■□□□□ 0.74
PTCD1-202ENST00000419981 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.68■□□□□ 0.74
PTCD1-202ENST00000419981 LINC01599Q8WXQ3 324 aa19.68■□□□□ 0.74
PTCD1-202ENST00000419981 ZNF689Q96CS4 500 aaPredicted RBP19.68■□□□□ 0.74
PTCD1-202ENST00000419981 C11orf84Q9BUA3 381 aaPredicted RBP19.68■□□□□ 0.74
PTCD1-202ENST00000419981 FTHL17Q9BXU8 183 aa19.68■□□□□ 0.74
PTCD1-202ENST00000419981 IGSF9BQ9UPX0 1349 aa19.68■□□□□ 0.74
PTCD1-202ENST00000419981 IGKV6D-21A0A0A0MT36 114 aa19.67■□□□□ 0.74
PTCD1-202ENST00000419981 SMIM35A0A1B0GVV1 85 aa19.67■□□□□ 0.74
PTCD1-202ENST00000419981 ESYT2A0FGR8 921 aa19.67■□□□□ 0.74
PTCD1-202ENST00000419981 FAM86B1E9PN63 330 aa19.67■□□□□ 0.74
PTCD1-202ENST00000419981 BACH1O14867 736 aa19.67■□□□□ 0.74
PTCD1-202ENST00000419981 CCNE2O96020 404 aa19.67■□□□□ 0.74
PTCD1-202ENST00000419981 FAM86B2P0C5J1 330 aa19.67■□□□□ 0.74
PTCD1-202ENST00000419981 LINC00271P0C7V0 271 aa19.67■□□□□ 0.74
PTCD1-202ENST00000419981 CPA1P15085 419 aa19.67■□□□□ 0.74
PTCD1-202ENST00000419981 BMPR1AP36894 532 aa19.67■□□□□ 0.74
PTCD1-202ENST00000419981 PAK2Q13177 524 aa19.67■□□□□ 0.74
PTCD1-202ENST00000419981 PTCRAQ6ISU1 281 aaPredicted RBP19.67■□□□□ 0.74
PTCD1-202ENST00000419981 MTHFD1LQ6UB35 978 aa19.67■□□□□ 0.74
PTCD1-202ENST00000419981 Q6ZUG5 572 aa19.67■□□□□ 0.74
PTCD1-202ENST00000419981 CCDC12Q8WUD4 166 aaPredicted RBP19.67■□□□□ 0.74
PTCD1-202ENST00000419981 CLP1Q92989 425 aaKnown RBP19.67■□□□□ 0.74
PTCD1-202ENST00000419981 JAKMIP1Q96N16 626 aaKnown RBP19.67■□□□□ 0.74
PTCD1-202ENST00000419981 CELF4Q9BZC1 486 aaKnown RBP19.67■□□□□ 0.74
PTCD1-202ENST00000419981 LMAN2LQ9H0V9 348 aa19.67■□□□□ 0.74
PTCD1-202ENST00000419981 EPHX3Q9H6B9 360 aa19.67■□□□□ 0.74
PTCD1-202ENST00000419981 RAPGEFL1Q9UHV5 662 aa19.67■□□□□ 0.74
PTCD1-202ENST00000419981 NID2Q14112 1375 aa19.67■□□□□ 0.74
PTCD1-202ENST00000419981 HBP1O60381 514 aa19.66■□□□□ 0.74
PTCD1-202ENST00000419981 DGKIO75912 1065 aa19.66■□□□□ 0.74
PTCD1-202ENST00000419981 PUS10Q3MIT2 529 aaKnown RBP19.66■□□□□ 0.74
PTCD1-202ENST00000419981 BLOC1S2Q6QNY1 142 aa19.66■□□□□ 0.74
PTCD1-202ENST00000419981 ABHD15Q6UXT9 468 aa19.66■□□□□ 0.74
PTCD1-202ENST00000419981 NME8Q8N427 588 aa19.66■□□□□ 0.74
PTCD1-202ENST00000419981 NEK9Q8TD19 979 aa19.66■□□□□ 0.74
PTCD1-202ENST00000419981 KCNB2Q92953 911 aa19.66■□□□□ 0.74
PTCD1-202ENST00000419981 BRF1Q92994 677 aa19.66■□□□□ 0.74
PTCD1-202ENST00000419981 PABPC5Q96DU9 382 aaKnown RBP19.66■□□□□ 0.74
PTCD1-202ENST00000419981 ZMYND12Q9H0C1 365 aa19.66■□□□□ 0.74
PTCD1-202ENST00000419981 C6orf50Q9HD87 102 aa19.66■□□□□ 0.74
PTCD1-202ENST00000419981 PADI3Q9ULW8 664 aa19.66■□□□□ 0.74
PTCD1-202ENST00000419981 KDM3AQ9Y4C1 1321 aa19.66■□□□□ 0.74
PTCD1-202ENST00000419981 COL1A2P08123 1366 aa19.66■□□□□ 0.74
PTCD1-202ENST00000419981 IPO5O00410 1097 aaKnown RBP19.65■□□□□ 0.74
PTCD1-202ENST00000419981 CYP3A4P08684 503 aa19.65■□□□□ 0.74
PTCD1-202ENST00000419981 IL9P15248 144 aa19.65■□□□□ 0.74
PTCD1-202ENST00000419981 KLRC1P26715 233 aa19.65■□□□□ 0.74
PTCD1-202ENST00000419981 HSPA4P34932 840 aa19.65■□□□□ 0.74
PTCD1-202ENST00000419981 SETQ01105 290 aaPredicted RBP19.65■□□□□ 0.74
PTCD1-202ENST00000419981 KRT76Q01546 638 aa19.65■□□□□ 0.74
PTCD1-202ENST00000419981 MCTP2Q6DN12 878 aa19.65■□□□□ 0.74
PTCD1-202ENST00000419981 MIS18BP1Q6P0N0 1132 aa19.65■□□□□ 0.74
PTCD1-202ENST00000419981 EP400NLQ6ZTU2 488 aa19.65■□□□□ 0.74
PTCD1-202ENST00000419981 NPAS4Q8IUM7 802 aa19.65■□□□□ 0.74
PTCD1-202ENST00000419981 CCDC60Q8IWA6 550 aaPredicted RBP19.65■□□□□ 0.74
PTCD1-202ENST00000419981 FAM178BQ8IXR5 827 aa19.65■□□□□ 0.74
PTCD1-202ENST00000419981 REXO1Q8N1G1 1221 aaKnown RBP19.65■□□□□ 0.74
PTCD1-202ENST00000419981 ATP8B4Q8TF62 1192 aa19.65■□□□□ 0.74
PTCD1-202ENST00000419981 CRYGNQ8WXF5 182 aa19.65■□□□□ 0.74
PTCD1-202ENST00000419981 PLVAPQ9BX97 442 aa19.65■□□□□ 0.74
PTCD1-202ENST00000419981 ZNF302Q9NR11 478 aa19.65■□□□□ 0.74
PTCD1-202ENST00000419981 IGLV3-22A0A075B6J6 115 aa19.64■□□□□ 0.73
PTCD1-202ENST00000419981 GRXCR2A6NFK2 248 aa19.64■□□□□ 0.73
PTCD1-202ENST00000419981 H3BQ06 376 aaPredicted RBP19.64■□□□□ 0.73
PTCD1-202ENST00000419981 GRM6O15303 877 aa19.64■□□□□ 0.73
PTCD1-202ENST00000419981 STAG3L1P0CL83 205 aa19.64■□□□□ 0.73
PTCD1-202ENST00000419981 PDXDC2PQ6P474 469 aa19.64■□□□□ 0.73
PTCD1-202ENST00000419981 RTN4RL1Q86UN2 441 aaPredicted RBP19.64■□□□□ 0.73
PTCD1-202ENST00000419981 CMTR2Q8IYT2 770 aaKnown RBP19.64■□□□□ 0.73
PTCD1-202ENST00000419981 ZNF577Q9BSK1 485 aa19.64■□□□□ 0.73
PTCD1-202ENST00000419981 CD320Q9NPF0 282 aa19.64■□□□□ 0.73
PTCD1-202ENST00000419981 CLDND1Q9NY35 253 aa19.64■□□□□ 0.73
PTCD1-202ENST00000419981 SNX14Q9Y5W7 946 aa19.64■□□□□ 0.73
PTCD1-202ENST00000419981 DHX15O43143 795 aaKnown RBP19.63■□□□□ 0.73
PTCD1-202ENST00000419981 PRPF3O43395 683 aaKnown RBP19.63■□□□□ 0.73
PTCD1-202ENST00000419981 GNA11P29992 359 aa19.63■□□□□ 0.73
PTCD1-202ENST00000419981 AKAP17AQ02040 695 aaKnown RBP19.63■□□□□ 0.73
PTCD1-202ENST00000419981 COL19A1Q14993 1142 aa19.63■□□□□ 0.73
PTCD1-202ENST00000419981 PKN1Q16512 942 aa19.63■□□□□ 0.73
PTCD1-202ENST00000419981 ZNF484Q5JVG2 852 aa19.63■□□□□ 0.73
PTCD1-202ENST00000419981 CRIPAKQ8N1N5 446 aa19.63■□□□□ 0.73
PTCD1-202ENST00000419981 KHSRPQ92945 711 aaKnown RBP eCLIP19.63■□□□□ 0.73
PTCD1-202ENST00000419981 UIMC1Q96RL1 719 aa19.63■□□□□ 0.73
PTCD1-202ENST00000419981 TCEAL9Q9UHQ7 104 aa19.63■□□□□ 0.73
PTCD1-202ENST00000419981 GINS2Q9Y248 185 aa19.63■□□□□ 0.73
PTCD1-202ENST00000419981 MRPL42Q9Y6G3 142 aaKnown RBP19.63■□□□□ 0.73
PTCD1-202ENST00000419981 NCK2O43639 380 aa19.62■□□□□ 0.73
PTCD1-202ENST00000419981 MMP1P03956 469 aa19.62■□□□□ 0.73
PTCD1-202ENST00000419981 RPS6KB1P23443 525 aa19.62■□□□□ 0.73
PTCD1-202ENST00000419981 SSTR3P32745 418 aaPredicted RBP19.62■□□□□ 0.73
PTCD1-202ENST00000419981 NFX1Q12986 1120 aaKnown RBP19.62■□□□□ 0.73
PTCD1-202ENST00000419981 TMEM266Q2M3C6 531 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms