RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 TMEM151BQ8IW70 566 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 ZCRB1Q8TBF4 217 aaKnown RBP5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 FOXRED1Q96CU9 486 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 PWWP2AQ96N64 755 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 GBP4Q96PP9 640 aa5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 SPATA6Q9NWH7 488 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 H2AFY2Q9P0M6 372 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 APOBEC2Q9Y235 224 aaKnown RBP5.38□□□□□ -1.55
HMGB1P11-201ENST00000413899 GOLGA6L22H0YM25 854 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 CYP7B1O75881 506 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 SLC9A1P19634 815 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 ADCY1Q08828 1119 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 STRN3Q13033 797 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 RTP5Q14D33 572 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 ZNF124Q15973 351 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 SKIDA1Q1XH10 827 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 RTN4RL1Q86UN2 441 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 C11orf74Q86VG3 221 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 PASD1Q8IV76 773 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 ZZZ3Q8IYH5 903 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 E2F7Q96AV8 911 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 ZBTB8AQ96BR9 441 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 GPR101Q96P66 508 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 ZMAT4Q9H898 229 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 SLC39A2Q9NP94 309 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 EMC7Q9NPA0 242 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 PCDH12Q9NPG4 1184 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 SPTLC3Q9NUV7 552 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 GALNT8Q9NY28 637 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 ARHGAP28Q9P2N2 729 aa5.37□□□□□ -1.55
HMGB1P11-201ENST00000413899 FFAR3O14843 346 aa5.36□□□□□ -1.55
HMGB1P11-201ENST00000413899 NCLP19338 710 aaKnown RBP5.36□□□□□ -1.55
HMGB1P11-201ENST00000413899 PTX3P26022 381 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P11-201ENST00000413899 RPL13P26373 211 aaKnown RBP5.36□□□□□ -1.55
HMGB1P11-201ENST00000413899 AFF3P51826 1226 aaKnown RBP5.36□□□□□ -1.55
HMGB1P11-201ENST00000413899 SMAD4Q13485 552 aaKnown RBP5.36□□□□□ -1.55
HMGB1P11-201ENST00000413899 STAT4Q14765 748 aa5.36□□□□□ -1.55
HMGB1P11-201ENST00000413899 PTPROQ16827 1216 aa5.36□□□□□ -1.55
HMGB1P11-201ENST00000413899 ESRP1Q6NXG1 681 aaKnown RBP5.36□□□□□ -1.55
HMGB1P11-201ENST00000413899 FOXB1Q99853 325 aa5.36□□□□□ -1.55
HMGB1P11-201ENST00000413899 FAM126AQ9BYI3 521 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P11-201ENST00000413899 INCENPQ9NQS7 918 aa5.36□□□□□ -1.55
HMGB1P11-201ENST00000413899 TOMM22Q9NS69 142 aa5.36□□□□□ -1.55
HMGB1P11-201ENST00000413899 KCND1Q9NSA2 647 aa5.36□□□□□ -1.55
HMGB1P11-201ENST00000413899 ARHGAP20Q9P2F6 1191 aa5.36□□□□□ -1.55
HMGB1P11-201ENST00000413899 MCM8Q9UJA3 840 aa5.36□□□□□ -1.55
HMGB1P11-201ENST00000413899 ATP8A1Q9Y2Q0 1164 aa5.36□□□□□ -1.55
HMGB1P11-201ENST00000413899 COL4A3BPQ9Y5P4 624 aa5.36□□□□□ -1.55
HMGB1P11-201ENST00000413899 DBX1A6NMT0 343 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 GPR39O43194 453 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 ULK1O75385 1050 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 MAFO75444 373 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 IL18BPO95998 194 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 COL6A1P12109 1028 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 ZNF28P17035 718 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 MC4RP32245 332 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 ALDH6A1Q02252 535 aaKnown RBP5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 STILQ15468 1287 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 TERF2Q15554 542 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 ATP13A4Q4VNC1 1196 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 CIAPIN1Q6FI81 312 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 CXXC5Q7LFL8 322 aaKnown RBP5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 STK32CQ86UX6 486 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 DDX42Q86XP3 938 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 C1QL4Q86Z23 238 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 ZNF610Q8N9Z0 462 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 HIPK4Q8NE63 616 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 GPATCH3Q96I76 525 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 TOX2Q96NM4 488 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 BTBD2Q9BX70 525 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 AMNQ9BXJ7 453 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 KRTAP4-8Q9BYQ9 185 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 USP36Q9P275 1121 aaKnown RBP5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 ZFP69BQ9UJL9 534 aa5.35□□□□□ -1.55
HMGB1P11-201ENST00000413899 PRAMEF22A3QJZ6 481 aa5.34□□□□□ -1.55
HMGB1P11-201ENST00000413899 NUAK1O60285 661 aa5.34□□□□□ -1.55
HMGB1P11-201ENST00000413899 KNG1P01042 644 aa5.34□□□□□ -1.55
HMGB1P11-201ENST00000413899 CD40P25942 277 aa5.34□□□□□ -1.55
HMGB1P11-201ENST00000413899 LSP1P33241 339 aa5.34□□□□□ -1.55
HMGB1P11-201ENST00000413899 ECE1P42892 770 aa5.34□□□□□ -1.55
HMGB1P11-201ENST00000413899 ID4P47928 161 aa5.34□□□□□ -1.55
HMGB1P11-201ENST00000413899 PRAMEF18Q5VWM3 479 aa5.34□□□□□ -1.55
HMGB1P11-201ENST00000413899 DPP8Q6V1X1 898 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P11-201ENST00000413899 TTLL7Q6ZT98 887 aa5.34□□□□□ -1.55
HMGB1P11-201ENST00000413899 LINC01356Q8N9X3 169 aa5.34□□□□□ -1.55
HMGB1P11-201ENST00000413899 TP53I13Q8NBR0 393 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P11-201ENST00000413899 CALML6Q8TD86 181 aa5.34□□□□□ -1.55
HMGB1P11-201ENST00000413899 ZNF526Q8TF50 670 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P11-201ENST00000413899 SLC5A5Q92911 643 aa5.34□□□□□ -1.55
HMGB1P11-201ENST00000413899 ZSWIM3Q96MP5 696 aa5.34□□□□□ -1.55
HMGB1P11-201ENST00000413899 UCKL1Q9NWZ5 548 aa5.34□□□□□ -1.55
HMGB1P11-201ENST00000413899 NTMQ9P121 344 aa5.34□□□□□ -1.55
HMGB1P11-201ENST00000413899 PHLDB1Q86UU1 1377 aa5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 FBXO21O94952 628 aa5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 PRLP01236 227 aa5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 CFPP27918 469 aa5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 GLRBP48167 497 aa5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 MLLT6P55198 1093 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P11-201ENST00000413899 SESN3P58005 492 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms