RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 METAP2P50579 478 aaKnown RBP eCLIP21.9■■□□□ 1.1
CPSF7-204ENST00000413232 ABHD15Q6UXT9 468 aa21.9■■□□□ 1.1
CPSF7-204ENST00000413232 TEX2Q8IWB9 1127 aa21.9■■□□□ 1.1
CPSF7-204ENST00000413232 CRIPAKQ8N1N5 446 aa21.9■■□□□ 1.1
CPSF7-204ENST00000413232 ZNF689Q96CS4 500 aaPredicted RBP21.9■■□□□ 1.1
CPSF7-204ENST00000413232 PCDHA2Q9Y5H9 948 aa21.9■■□□□ 1.1
CPSF7-204ENST00000413232 POTEB3A0JP26 581 aa21.89■■□□□ 1.09
CPSF7-204ENST00000413232 ATP4AP20648 1035 aa21.89■■□□□ 1.09
CPSF7-204ENST00000413232 ZNF76P36508 570 aa21.89■■□□□ 1.09
CPSF7-204ENST00000413232 POTEBQ6S5H4 581 aa21.89■■□□□ 1.09
CPSF7-204ENST00000413232 NIPA1Q7RTP0 329 aa21.89■■□□□ 1.09
CPSF7-204ENST00000413232 PLA2G4DQ86XP0 818 aa21.89■■□□□ 1.09
CPSF7-204ENST00000413232 CCDC60Q8IWA6 550 aaPredicted RBP21.89■■□□□ 1.09
CPSF7-204ENST00000413232 FIBCD1Q8N539 461 aa21.89■■□□□ 1.09
CPSF7-204ENST00000413232 BANK1Q8NDB2 785 aa21.89■■□□□ 1.09
CPSF7-204ENST00000413232 ZMYND12Q9H0C1 365 aa21.89■■□□□ 1.09
CPSF7-204ENST00000413232 ADGRA3Q8IWK6 1321 aa21.88■■□□□ 1.09
CPSF7-204ENST00000413232 CYP3A4P08684 503 aa21.88■■□□□ 1.09
CPSF7-204ENST00000413232 FGD1P98174 961 aa21.88■■□□□ 1.09
CPSF7-204ENST00000413232 NTRK3Q16288 839 aa21.88■■□□□ 1.09
CPSF7-204ENST00000413232 LEXMQ3ZCV2 418 aa21.88■■□□□ 1.09
CPSF7-204ENST00000413232 TCEAL5Q5H9L2 206 aa21.88■■□□□ 1.09
CPSF7-204ENST00000413232 IER5Q5VY09 327 aa21.88■■□□□ 1.09
CPSF7-204ENST00000413232 MTHFD1LQ6UB35 978 aa21.88■■□□□ 1.09
CPSF7-204ENST00000413232 PHKBQ93100 1093 aa21.88■■□□□ 1.09
CPSF7-204ENST00000413232 PADI3Q9ULW8 664 aa21.88■■□□□ 1.09
CPSF7-204ENST00000413232 TRPV2Q9Y5S1 764 aa21.88■■□□□ 1.09
CPSF7-204ENST00000413232 FNDC1Q4ZHG4 1894 aaPredicted RBP21.88■■□□□ 1.09
CPSF7-204ENST00000413232 IGSF9BQ9UPX0 1349 aa21.87■■□□□ 1.09
CPSF7-204ENST00000413232 C5orf67F2Z3F1 127 aa21.87■■□□□ 1.09
CPSF7-204ENST00000413232 GRM6O15303 877 aa21.87■■□□□ 1.09
CPSF7-204ENST00000413232 EDIL3O43854 480 aa21.87■■□□□ 1.09
CPSF7-204ENST00000413232 DGKIO75912 1065 aa21.87■■□□□ 1.09
CPSF7-204ENST00000413232 KLRC1P26715 233 aa21.87■■□□□ 1.09
CPSF7-204ENST00000413232 CTNNB1P35222 781 aa21.87■■□□□ 1.09
CPSF7-204ENST00000413232 BMPR1AP36894 532 aa21.87■■□□□ 1.09
CPSF7-204ENST00000413232 PTPROQ16827 1216 aa21.87■■□□□ 1.09
CPSF7-204ENST00000413232 RASGRP4Q8TDF6 673 aa21.87■■□□□ 1.09
CPSF7-204ENST00000413232 CLP1Q92989 425 aaKnown RBP21.87■■□□□ 1.09
CPSF7-204ENST00000413232 AGXT2Q9BYV1 514 aa21.87■■□□□ 1.09
CPSF7-204ENST00000413232 CELF4Q9BZC1 486 aaKnown RBP21.87■■□□□ 1.09
CPSF7-204ENST00000413232 GLT8D2Q9H1C3 349 aa21.87■■□□□ 1.09
CPSF7-204ENST00000413232 TMX1Q9H3N1 280 aa21.87■■□□□ 1.09
CPSF7-204ENST00000413232 CDHR5Q9HBB8 845 aa21.87■■□□□ 1.09
CPSF7-204ENST00000413232 NID2Q14112 1375 aa21.87■■□□□ 1.09
CPSF7-204ENST00000413232 SMIM35A0A1B0GVV1 85 aa21.86■■□□□ 1.09
CPSF7-204ENST00000413232 ESYT2A0FGR8 921 aa21.86■■□□□ 1.09
CPSF7-204ENST00000413232 ZBTB42B2RXF5 422 aa21.86■■□□□ 1.09
CPSF7-204ENST00000413232 IPO5O00410 1097 aaKnown RBP21.86■■□□□ 1.09
CPSF7-204ENST00000413232 PRPF3O43395 683 aaKnown RBP21.86■■□□□ 1.09
CPSF7-204ENST00000413232 IL9P15248 144 aa21.86■■□□□ 1.09
CPSF7-204ENST00000413232 RPS6KB1P23443 525 aa21.86■■□□□ 1.09
CPSF7-204ENST00000413232 TMEM266Q2M3C6 531 aa21.86■■□□□ 1.09
CPSF7-204ENST00000413232 BLOC1S2Q6QNY1 142 aa21.86■■□□□ 1.09
CPSF7-204ENST00000413232 FBXL16Q8N461 479 aa21.86■■□□□ 1.09
CPSF7-204ENST00000413232 SQORQ9Y6N5 450 aa21.86■■□□□ 1.09
CPSF7-204ENST00000413232 CCDC196A0A1B0GTZ2 297 aa21.85■■□□□ 1.09
CPSF7-204ENST00000413232 H3BQ06 376 aaPredicted RBP21.85■■□□□ 1.09
CPSF7-204ENST00000413232 BACH1O14867 736 aa21.85■■□□□ 1.09
CPSF7-204ENST00000413232 BTG3Q14201 252 aaPredicted RBP21.85■■□□□ 1.09
CPSF7-204ENST00000413232 SWSAP1Q6NVH7 229 aa21.85■■□□□ 1.09
CPSF7-204ENST00000413232 KIAA0319LQ8IZA0 1049 aa21.85■■□□□ 1.09
CPSF7-204ENST00000413232 NEK9Q8TD19 979 aa21.85■■□□□ 1.09
CPSF7-204ENST00000413232 ATP8B4Q8TF62 1192 aa21.85■■□□□ 1.09
CPSF7-204ENST00000413232 PLXNA4Q9HCM2 1894 aa21.85■■□□□ 1.09
CPSF7-204ENST00000413232 KDM3AQ9Y4C1 1321 aa21.84■■□□□ 1.09
CPSF7-204ENST00000413232 HBP1O60381 514 aa21.84■■□□□ 1.09
CPSF7-204ENST00000413232 GATMP50440 423 aa21.84■■□□□ 1.09
CPSF7-204ENST00000413232 SLC26A2P50443 739 aa21.84■■□□□ 1.09
CPSF7-204ENST00000413232 KRT76Q01546 638 aa21.84■■□□□ 1.09
CPSF7-204ENST00000413232 CAMK1Q14012 370 aa21.84■■□□□ 1.09
CPSF7-204ENST00000413232 COL19A1Q14993 1142 aa21.84■■□□□ 1.09
CPSF7-204ENST00000413232 TIGD5Q53EQ6 642 aa21.84■■□□□ 1.09
CPSF7-204ENST00000413232 PDXDC2PQ6P474 469 aa21.84■■□□□ 1.09
CPSF7-204ENST00000413232 TMEM40Q8WWA1 233 aa21.84■■□□□ 1.09
CPSF7-204ENST00000413232 NSUN3Q9H649 340 aaKnown RBP21.84■■□□□ 1.09
CPSF7-204ENST00000413232 NCOA5Q9HCD5 579 aaKnown RBP21.84■■□□□ 1.09
CPSF7-204ENST00000413232 ZNF302Q9NR11 478 aa21.84■■□□□ 1.09
CPSF7-204ENST00000413232 MRPL42Q9Y6G3 142 aaKnown RBP21.84■■□□□ 1.09
CPSF7-204ENST00000413232 M0QZ92 97 aa21.83■■□□□ 1.09
CPSF7-204ENST00000413232 MGEA5O60502 916 aa21.83■■□□□ 1.09
CPSF7-204ENST00000413232 RPLP2P05387 115 aaKnown RBP21.83■■□□□ 1.09
CPSF7-204ENST00000413232 RB1P06400 928 aa21.83■■□□□ 1.09
CPSF7-204ENST00000413232 CCT2P78371 535 aaKnown RBP21.83■■□□□ 1.09
CPSF7-204ENST00000413232 PTCRAQ6ISU1 281 aaPredicted RBP21.83■■□□□ 1.09
CPSF7-204ENST00000413232 TRMT1LQ7Z2T5 733 aaKnown RBP21.83■■□□□ 1.09
CPSF7-204ENST00000413232 FAM178BQ8IXR5 827 aa21.83■■□□□ 1.09
CPSF7-204ENST00000413232 REXO1Q8N1G1 1221 aaKnown RBP21.83■■□□□ 1.09
CPSF7-204ENST00000413232 NME8Q8N427 588 aa21.83■■□□□ 1.09
CPSF7-204ENST00000413232 TNPO1Q92973 898 aaKnown RBP21.83■■□□□ 1.09
CPSF7-204ENST00000413232 LENG9Q96B70 501 aa21.83■■□□□ 1.09
CPSF7-204ENST00000413232 ZNF577Q9BSK1 485 aa21.83■■□□□ 1.09
CPSF7-204ENST00000413232 C6orf50Q9HD87 102 aa21.83■■□□□ 1.09
CPSF7-204ENST00000413232 GRXCR2A6NFK2 248 aa21.82■■□□□ 1.08
CPSF7-204ENST00000413232 CSPG5O95196 566 aa21.82■■□□□ 1.08
CPSF7-204ENST00000413232 PDIA3P30101 505 aaKnown RBP21.82■■□□□ 1.08
CPSF7-204ENST00000413232 LTBRP36941 435 aa21.82■■□□□ 1.08
CPSF7-204ENST00000413232 PAK2Q13177 524 aa21.82■■□□□ 1.08
CPSF7-204ENST00000413232 PRR16Q569H4 304 aa21.82■■□□□ 1.08
CPSF7-204ENST00000413232 FAM160B1Q5W0V3 765 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms