RNA–Protein interactions for RNA: ENST00000409937.1

CNGA3-204, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CNGA3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-204ENST00000409937 IQCKQ8N0W5 287 aa15.42■□□□□ 0.06
CNGA3-204ENST00000409937 TAF4BQ92750 862 aa15.42■□□□□ 0.06
CNGA3-204ENST00000409937 EDEM3Q9BZQ6 932 aa15.42■□□□□ 0.06
CNGA3-204ENST00000409937 KCNMB3Q9NPA1 279 aa15.42■□□□□ 0.06
CNGA3-204ENST00000409937 ARMCX3Q9UH62 379 aaPredicted RBP15.42■□□□□ 0.06
CNGA3-204ENST00000409937 TADA2BQ86TJ2 420 aa15.42■□□□□ 0.06
CNGA3-204ENST00000409937 SLF2Q8IX21 1173 aa15.42■□□□□ 0.06
CNGA3-204ENST00000409937 PIGOQ8TEQ8 1089 aa15.42■□□□□ 0.06
CNGA3-204ENST00000409937 BHMT2Q9H2M3 363 aa15.42■□□□□ 0.06
CNGA3-204ENST00000409937 AIPL1Q9NZN9 384 aa15.42■□□□□ 0.06
CNGA3-204ENST00000409937 SHTN1A0MZ66 631 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 MEIS2O14770 477 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 CHMP2AO43633 222 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 KIF4AO95239 1232 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 SPATA31C1P0DKV0 1188 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 ARHGAP4P98171 946 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 SPIRE1Q08AE8 756 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 COG2Q14746 738 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 EXOC3L4Q17RC7 722 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 HYIQ5T013 277 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 TBC1D22AQ8WUA7 517 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 CELF4Q9BZC1 486 aaKnown RBP15.41■□□□□ 0.06
CNGA3-204ENST00000409937 TRIM31Q9BZY9 425 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 TSKSQ9UJT2 592 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 NAGPAQ9UK23 515 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 GFPT2O94808 682 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 GCNT3O95395 438 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 TNFRSF8P28908 595 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 ECHS1P30084 290 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 UBXN2AP68543 259 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 PPP1R18Q6NYC8 613 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 ALKBH5Q6P6C2 394 aaKnown RBP15.41■□□□□ 0.06
CNGA3-204ENST00000409937 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
CNGA3-204ENST00000409937 METTL13Q8N6R0 699 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 U2AF1L4Q8WU68 220 aaKnown RBP15.41■□□□□ 0.06
CNGA3-204ENST00000409937 SYN2Q92777 582 aaPredicted RBP15.41■□□□□ 0.06
CNGA3-204ENST00000409937 ASTN1O14525 1302 aa15.41■□□□□ 0.06
CNGA3-204ENST00000409937 DDTLA6NHG4 134 aaPredicted RBP15.4■□□□□ 0.06
CNGA3-204ENST00000409937 RGL2O15211 777 aa15.4■□□□□ 0.06
CNGA3-204ENST00000409937 AFPP02771 609 aaKnown RBP15.4■□□□□ 0.06
CNGA3-204ENST00000409937 EPB41P11171 864 aaKnown RBP15.4■□□□□ 0.06
CNGA3-204ENST00000409937 NR1D1P20393 614 aa15.4■□□□□ 0.06
CNGA3-204ENST00000409937 SEPT2Q15019 361 aa15.4■□□□□ 0.06
CNGA3-204ENST00000409937 VPS72Q15906 364 aa15.4■□□□□ 0.06
CNGA3-204ENST00000409937 ZC2HC1CQ53FD0 456 aaPredicted RBP15.4■□□□□ 0.06
CNGA3-204ENST00000409937 ETNPPLQ8TBG4 499 aa15.4■□□□□ 0.06
CNGA3-204ENST00000409937 PPM1EQ8WY54 764 aa15.4■□□□□ 0.06
CNGA3-204ENST00000409937 OSGEPQ9NPF4 335 aa15.4■□□□□ 0.06
CNGA3-204ENST00000409937 GCNT4Q9P109 453 aa15.4■□□□□ 0.06
CNGA3-204ENST00000409937 BCCIPQ9P287 314 aaKnown RBP eCLIP15.4■□□□□ 0.06
CNGA3-204ENST00000409937 NOC2LQ9Y3T9 749 aaKnown RBP15.4■□□□□ 0.06
CNGA3-204ENST00000409937 EML1O00423 815 aa15.4■□□□□ 0.06
CNGA3-204ENST00000409937 UAP1Q16222 522 aaPredicted RBP15.4■□□□□ 0.06
CNGA3-204ENST00000409937 KNOP1Q1ED39 458 aaKnown RBP15.4■□□□□ 0.06
CNGA3-204ENST00000409937 GLE1Q53GS7 698 aaKnown RBP15.4■□□□□ 0.06
CNGA3-204ENST00000409937 SLFN13Q68D06 897 aa15.4■□□□□ 0.06
CNGA3-204ENST00000409937 SPICE1Q8N0Z3 855 aa15.4■□□□□ 0.06
CNGA3-204ENST00000409937 NUCKS1Q9H1E3 243 aaKnown RBP15.4■□□□□ 0.06
CNGA3-204ENST00000409937 DPH5Q9H2P9 285 aa15.4■□□□□ 0.06
CNGA3-204ENST00000409937 SIX2Q9NPC8 291 aa15.4■□□□□ 0.06
CNGA3-204ENST00000409937 LUC7LQ9NQ29 371 aaKnown RBP15.4■□□□□ 0.06
CNGA3-204ENST00000409937 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.4■□□□□ 0.06
CNGA3-204ENST00000409937 AMACRQ9UHK6 382 aa15.4■□□□□ 0.06
CNGA3-204ENST00000409937 PPEF1O14829 653 aaPredicted RBP15.39■□□□□ 0.05
CNGA3-204ENST00000409937 GNA14O95837 355 aa15.39■□□□□ 0.05
CNGA3-204ENST00000409937 XRCC5P13010 732 aaKnown RBP15.39■□□□□ 0.05
CNGA3-204ENST00000409937 GCFC2P16383 781 aaKnown RBP15.39■□□□□ 0.05
CNGA3-204ENST00000409937 ABCB4P21439 1286 aa15.39■□□□□ 0.05
CNGA3-204ENST00000409937 NMT1P30419 496 aaKnown RBP15.39■□□□□ 0.05
CNGA3-204ENST00000409937 LSP1P33241 339 aa15.39■□□□□ 0.05
CNGA3-204ENST00000409937 MARSP56192 900 aaKnown RBP15.39■□□□□ 0.05
CNGA3-204ENST00000409937 CTTNQ14247 550 aaKnown RBP15.39■□□□□ 0.05
CNGA3-204ENST00000409937 GPATCH4Q5T3I0 446 aaKnown RBP15.39■□□□□ 0.05
CNGA3-204ENST00000409937 KIAA0825Q8IV33 1275 aa15.39■□□□□ 0.05
CNGA3-204ENST00000409937 EFCAB13Q8IY85 973 aa15.39■□□□□ 0.05
CNGA3-204ENST00000409937 LRRC57Q8N9N7 239 aa15.39■□□□□ 0.05
CNGA3-204ENST00000409937 LENG9Q96B70 501 aa15.39■□□□□ 0.05
CNGA3-204ENST00000409937 DBNDD1Q9H9R9 158 aa15.39■□□□□ 0.05
CNGA3-204ENST00000409937 NR2E1Q9Y466 385 aa15.39■□□□□ 0.05
CNGA3-204ENST00000409937 AFF2P51816 1311 aa15.39■□□□□ 0.05
CNGA3-204ENST00000409937 IGSF9BQ9UPX0 1349 aa15.39■□□□□ 0.05
CNGA3-204ENST00000409937 NR3C1P04150 777 aa15.39■□□□□ 0.05
CNGA3-204ENST00000409937 HSD17B3P37058 310 aa15.39■□□□□ 0.05
CNGA3-204ENST00000409937 TNNC1P63316 161 aa15.39■□□□□ 0.05
CNGA3-204ENST00000409937 SKOR1P84550 965 aa15.39■□□□□ 0.05
CNGA3-204ENST00000409937 SF3A3Q12874 501 aaKnown RBP eCLIP15.39■□□□□ 0.05
CNGA3-204ENST00000409937 APOBEC3HQ6NTF7 200 aaKnown RBP15.39■□□□□ 0.05
CNGA3-204ENST00000409937 FRMD3A2A2Y4 597 aa15.38■□□□□ 0.05
CNGA3-204ENST00000409937 DDX3XO00571 662 aaKnown RBP eCLIP15.38■□□□□ 0.05
CNGA3-204ENST00000409937 DAPK3O43293 454 aa15.38■□□□□ 0.05
CNGA3-204ENST00000409937 HDLBPQ00341 1268 aaKnown RBP15.38■□□□□ 0.05
CNGA3-204ENST00000409937 EPHA7Q15375 998 aa15.38■□□□□ 0.05
CNGA3-204ENST00000409937 GBP6Q6ZN66 633 aa15.38■□□□□ 0.05
CNGA3-204ENST00000409937 RUBCNQ92622 972 aa15.38■□□□□ 0.05
CNGA3-204ENST00000409937 TRIM51Q9BSJ1 452 aa15.38■□□□□ 0.05
CNGA3-204ENST00000409937 CHORDC1Q9UHD1 332 aaPredicted RBP15.38■□□□□ 0.05
CNGA3-204ENST00000409937 DNM3Q9UQ16 869 aa15.38■□□□□ 0.05
CNGA3-204ENST00000409937 DCDC2CA8MYV0 355 aa15.38■□□□□ 0.05
CNGA3-204ENST00000409937 TTI1O43156 1089 aa15.38■□□□□ 0.05
CNGA3-204ENST00000409937 SART1O43290 800 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms