RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 IFIH1Q9BYX4 1025 aaKnown RBP5.44□□□□□ -1.54
SCN3A-203ENST00000409101 BHMT2Q9H2M3 363 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 VPS37BQ9H9H4 285 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 FEZ2Q9UHY8 353 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-203ENST00000409101 PCDHA10Q9Y5I2 948 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 NEMP1O14524 444 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 SRGNP10124 158 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 DEFB115Q30KQ5 88 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 ZNF699Q32M78 642 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 RWDD4Q6NW29 188 aaKnown RBP5.44□□□□□ -1.54
SCN3A-203ENST00000409101 TEX2Q8IWB9 1127 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 FBXO18Q8NFZ0 1043 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 CNOT6LQ96LI5 555 aaKnown RBP5.44□□□□□ -1.54
SCN3A-203ENST00000409101 UBE2TQ9NPD8 197 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-203ENST00000409101 TMEM260Q9NX78 707 aa5.44□□□□□ -1.54
SCN3A-203ENST00000409101 MAGED2Q9UNF1 606 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-203ENST00000409101 RGS12O14924 1447 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 KIDINS220Q9ULH0 1771 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 STXBP3O00186 592 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 PDHXO00330 501 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 SEC24BO95487 1268 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 TBC1D8O95759 1140 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 CYBBP04839 570 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 ATXN8OSP0DMR3 200 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 LAMC2Q13753 1193 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 SNX17Q15036 470 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 ARHGAP15Q53QZ3 475 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 KAZNQ674X7 775 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 DNAJC24Q6P3W2 148 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 SPATA2LQ8IUW3 424 aaPredicted RBP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 CCNYQ8ND76 341 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 ZNF668Q96K58 619 aaPredicted RBP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 FAM107BQ9H098 131 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 ENTPD7Q9NQZ7 604 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 DYRK4Q9NR20 520 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 STRIP2Q9ULQ0 834 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 RRN3P2A6NIE6 340 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 POLRMTO00411 1230 aaKnown RBP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 SLC16A4O15374 487 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 PRPSAP2O60256 369 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 ITGA4P13612 1032 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 PLCG1P19174 1290 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 C8orf74Q6P047 294 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 LRRC31Q6UY01 552 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 PGBD3Q8N328 593 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 P2RX5Q93086 422 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 KRT12Q99456 494 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 GLIS2Q9BZE0 524 aaPredicted RBP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 CPVLQ9H3G5 476 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 STARD7Q9NQZ5 370 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 DONSONQ9NYP3 566 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 RFX7Q2KHR2 1363 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 IPO5O00410 1097 aaKnown RBP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 MXI1P50539 228 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 ATN1P54259 1190 aaPredicted RBP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 CYP27A1Q02318 531 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 MAP7Q14244 749 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 ALX1Q15699 326 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 ADCK5Q3MIX3 580 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 ENAHQ8N8S7 591 aaPredicted RBP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 NSUN7Q8NE18 718 aaKnown RBP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 TDRD7Q8NHU6 1098 aaKnown RBP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 CCDC51Q96ER9 411 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 ACAP3Q96P50 834 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 MROH8Q9H579 483 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 PCDHA7Q9UN72 937 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 LRRIQ1Q96JM4 1722 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 SFI1A8K8P3 1242 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 MAGEB2O15479 319 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 EFNA5P52803 228 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 SDE2Q6IQ49 451 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 DDX53Q86TM3 631 aaKnown RBP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 KCTD6Q8NC69 237 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 N4BP2L2Q92802 583 aaPredicted RBP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 ATP2A3Q93084 1043 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 KIF12Q96FN5 646 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 CFAP57Q96MR6 1250 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 LXNQ9BS40 222 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 TRIM31Q9BZY9 425 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 POLLQ9UGP5 575 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 BZW2Q9Y6E2 419 aaKnown RBP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 SPDYE2BA6NHP3 402 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 PRRG1O14668 218 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 TRPA1O75762 1119 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 CSF1RP07333 972 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 SUPT20HL2P0C7V6 817 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 SPDYE6P0CI01 402 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 PHBP35232 272 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 PPARGP37231 505 aaPredicted RBP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 GRIK1P39086 918 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 GARSP41250 739 aaKnown RBP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 TPD52P55327 224 aaPredicted RBP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 KIF23Q02241 960 aaPredicted RBP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 ORC2Q13416 577 aaPredicted RBP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 MTX1Q13505 466 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 ZNF658Q5TYW1 1059 aaPredicted RBP5.43□□□□□ -1.54
SCN3A-203ENST00000409101 FYB2Q5VWT5 728 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 CYB5R4Q7L1T6 521 aa5.43□□□□□ -1.54
SCN3A-203ENST00000409101 FBXO33Q7Z6M2 555 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms