RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 FAM153BP0C7A2 387 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 SLC9A1P19634 815 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 PON1P27169 355 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 HSPA9P38646 679 aaKnown RBP11.75□□□□□ -0.53
CLIP4-204ENST00000404424 STAT3P40763 770 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 CUL1Q13616 776 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 FAM153CQ494X1 144 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 ALKBH5Q6P6C2 394 aaKnown RBP11.75□□□□□ -0.53
CLIP4-204ENST00000404424 SCFD2Q8WU76 684 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 TEKT1Q969V4 418 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 ZC3H12CQ9C0D7 883 aaKnown RBP11.75□□□□□ -0.53
CLIP4-204ENST00000404424 FAM153AQ9UHL3 310 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 PACSIN2Q9UNF0 486 aaPredicted RBP11.75□□□□□ -0.53
CLIP4-204ENST00000404424 GTPBP10A4D1E9 387 aaKnown RBP11.75□□□□□ -0.53
CLIP4-204ENST00000404424 ZNF233A6NK53 670 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 RIMBP2O15034 1052 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 RAD51CO43502 376 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 SPATA31C1P0DKV0 1188 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 ACTN1P12814 892 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 DNA2P51530 1060 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 CASP5P51878 434 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 EPHA7Q15375 998 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 TTC31Q49AM3 519 aaPredicted RBP11.75□□□□□ -0.53
CLIP4-204ENST00000404424 SLFN13Q68D06 897 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 LRIG3Q6UXM1 1119 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 SFR1Q86XK3 245 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 SPATS2Q86XZ4 545 aaKnown RBP11.75□□□□□ -0.53
CLIP4-204ENST00000404424 LRRC57Q8N9N7 239 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 REEP2Q9BRK0 252 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 AMNQ9BXJ7 453 aa11.75□□□□□ -0.53
CLIP4-204ENST00000404424 ESYT3A0FGR9 886 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 ZSCAN5CA6NGD5 496 aaPredicted RBP11.74□□□□□ -0.53
CLIP4-204ENST00000404424 HMGB1P1B2RPK0 211 aaPredicted RBP11.74□□□□□ -0.53
CLIP4-204ENST00000404424 CCDC188H7C350 402 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 GFPT2O94808 682 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 KRT14P02533 472 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 NOP2P46087 812 aaKnown RBP11.74□□□□□ -0.53
CLIP4-204ENST00000404424 NPEPPSP55786 919 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 ENOX2Q16206 610 aaKnown RBP11.74□□□□□ -0.53
CLIP4-204ENST00000404424 PRR16Q569H4 304 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 APOBEC3HQ6NTF7 200 aaKnown RBP11.74□□□□□ -0.53
CLIP4-204ENST00000404424 B4GALNT4Q76KP1 1039 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 TADA2BQ86TJ2 420 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 SYCE1Q8N0S2 351 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 PIK3R5Q8WYR1 880 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 LRRC4BQ9NT99 713 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 NENFQ9UMX5 172 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 ATXN2Q99700 1313 aaKnown RBP11.74□□□□□ -0.53
CLIP4-204ENST00000404424 SPDYE3A6NKU9 549 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 AKAP3O75969 853 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 EEF2P13639 858 aaKnown RBP11.74□□□□□ -0.53
CLIP4-204ENST00000404424 CIITAP33076 1130 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 HOXD13P35453 343 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 SREBF1P36956 1147 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 MMP14P50281 582 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 PSMC6P62333 389 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 PABPC4Q13310 644 aaKnown RBP eCLIP11.74□□□□□ -0.53
CLIP4-204ENST00000404424 FAM182BQ5T319 152 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 TPCN2Q8NHX9 752 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 LRRC45Q96CN5 670 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 POLR3CQ9BUI4 534 aaPredicted RBP11.74□□□□□ -0.53
CLIP4-204ENST00000404424 FAM169AQ9Y6X4 670 aa11.74□□□□□ -0.53
CLIP4-204ENST00000404424 SRRM3A6NNA2 597 aaPredicted RBP11.73□□□□□ -0.53
CLIP4-204ENST00000404424 BHMG1C9JSJ3 638 aaPredicted RBP11.73□□□□□ -0.53
CLIP4-204ENST00000404424 PGRMC1O00264 195 aaKnown RBP11.73□□□□□ -0.53
CLIP4-204ENST00000404424 TOM1O60784 492 aa11.73□□□□□ -0.53
CLIP4-204ENST00000404424 NR3C1P04150 777 aa11.73□□□□□ -0.53
CLIP4-204ENST00000404424 H2AFZP0C0S5 128 aa11.73□□□□□ -0.53
CLIP4-204ENST00000404424 GAP43P17677 238 aa11.73□□□□□ -0.53
CLIP4-204ENST00000404424 GUCY2FP51841 1108 aa11.73□□□□□ -0.53
CLIP4-204ENST00000404424 JAM2P57087 298 aa11.73□□□□□ -0.53
CLIP4-204ENST00000404424 NFIL3Q16649 462 aa11.73□□□□□ -0.53
CLIP4-204ENST00000404424 CERKLQ49MI3 558 aaPredicted RBP11.73□□□□□ -0.53
CLIP4-204ENST00000404424 H2AFVQ71UI9 128 aa11.73□□□□□ -0.53
CLIP4-204ENST00000404424 SLFN11Q7Z7L1 901 aa11.73□□□□□ -0.53
CLIP4-204ENST00000404424 RBM46Q8TBY0 533 aaKnown RBP11.73□□□□□ -0.53
CLIP4-204ENST00000404424 LENG9Q96B70 501 aa11.73□□□□□ -0.53
CLIP4-204ENST00000404424 ATP6V1G3Q96LB4 118 aa11.73□□□□□ -0.53
CLIP4-204ENST00000404424 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.73□□□□□ -0.53
CLIP4-204ENST00000404424 MRIQ9BWK5 157 aa11.73□□□□□ -0.53
CLIP4-204ENST00000404424 OLFML3Q9NRN5 406 aa11.73□□□□□ -0.53
CLIP4-204ENST00000404424 SUCLA2Q9P2R7 463 aaPredicted RBP11.73□□□□□ -0.53
CLIP4-204ENST00000404424 GOLGA6L10A6NI86 522 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 POLRMTO00411 1230 aaKnown RBP11.72□□□□□ -0.53
CLIP4-204ENST00000404424 CEP104O60308 925 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 TBCAO75347 108 aaKnown RBP11.72□□□□□ -0.53
CLIP4-204ENST00000404424 EYA4O95677 639 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 FERP16591 822 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 NR1D1P20393 614 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 SCNN1DP51172 638 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 RNASE9P60153 205 aaKnown RBP11.72□□□□□ -0.53
CLIP4-204ENST00000404424 SKIDA1Q1XH10 827 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 DCAF17Q5H9S7 520 aaPredicted RBP11.72□□□□□ -0.53
CLIP4-204ENST00000404424 FBXO11Q86XK2 927 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 KLHL7Q8IXQ5 586 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 RASGEF1CQ8N431 466 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 SLC35C1Q96A29 364 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 DNAJC5Q9H3Z4 198 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 DNAJC18Q9H819 358 aa11.72□□□□□ -0.53
CLIP4-204ENST00000404424 USP21Q9UK80 565 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms