RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 TISP43B9A030 160 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 hCG_1984214I3L0E3 225 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 NOL4O94818 638 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 GCFC2P16383 781 aaKnown RBP4.78□□□□□ -1.64
SMC6-203ENST00000402989 PTK2Q05397 1052 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 GIT2Q14161 759 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 EXOC3L4Q17RC7 722 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 SLC27A3Q5K4L6 730 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 DACT2Q5SW24 774 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 PAPD7Q5XG87 772 aaKnown RBP4.78□□□□□ -1.64
SMC6-203ENST00000402989 IQCEQ6IPM2 695 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 HHIPL2Q6UWX4 724 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 TMEM179Q6ZVK1 233 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 TXLNBQ8N3L3 684 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 LARGE2Q8N3Y3 721 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 ZNF713Q8N859 430 aaPredicted RBP4.78□□□□□ -1.64
SMC6-203ENST00000402989 FAM84AQ96KN4 292 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 EPB41L5Q9HCM4 733 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 BCCIPQ9P287 314 aaKnown RBP eCLIP4.78□□□□□ -1.64
SMC6-203ENST00000402989 AJAP1Q9UKB5 411 aaPredicted RBP4.78□□□□□ -1.64
SMC6-203ENST00000402989 RAB21Q9UL25 225 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 NFU1Q9UMS0 254 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 SPATA31A6Q5VVP1 1343 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 MAP2K7O14733 419 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 AKAP3O75969 853 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 HEXIM1O94992 359 aaKnown RBP4.78□□□□□ -1.64
SMC6-203ENST00000402989 NR3C1P04150 777 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 EPB41P11171 864 aaKnown RBP4.78□□□□□ -1.64
SMC6-203ENST00000402989 MYCLP12524 364 aaPredicted RBP4.78□□□□□ -1.64
SMC6-203ENST00000402989 COPB2P35606 906 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 CLK2P49760 499 aaKnown RBP4.78□□□□□ -1.64
SMC6-203ENST00000402989 STAT2P52630 851 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 TUBB2AQ13885 445 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 DLGAP5Q15398 846 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 PODNQ7Z5L7 613 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 CREG2Q8IUH2 290 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 SLFN12Q8IYM2 578 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 SH2D3CQ8N5H7 860 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 ZDHHC15Q96MV8 337 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 TUBB2BQ9BVA1 445 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 CALCOCO1Q9P1Z2 691 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 CEP72Q9P209 647 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 HPCAL4Q9UM19 191 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 FZD1Q9UP38 647 aa4.78□□□□□ -1.64
SMC6-203ENST00000402989 SHTN1A0MZ66 631 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 GOLGA8IPA6NC78 632 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 GOLGA8JA6NMD2 632 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 AFPP02771 609 aaKnown RBP4.77□□□□□ -1.65
SMC6-203ENST00000402989 SERPING1P05155 500 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 SPATA31C1P0DKV0 1188 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 ARP10275 920 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 ALAS1P13196 640 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 SMARCA1P28370 1054 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 CARSP49589 748 aaKnown RBP4.77□□□□□ -1.65
SMC6-203ENST00000402989 SLC12A3P55017 1021 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 PSMD2Q13200 908 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 KNOP1Q1ED39 458 aaKnown RBP4.77□□□□□ -1.65
SMC6-203ENST00000402989 ODR4Q5SWX8 454 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 KLHDC7AQ5VTJ3 777 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 ZNF746Q6NUN9 644 aaPredicted RBP4.77□□□□□ -1.65
SMC6-203ENST00000402989 PPP1R18Q6NYC8 613 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 MAATS1Q7Z4T9 603 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 DDX42Q86XP3 938 aaKnown RBP eCLIP4.77□□□□□ -1.65
SMC6-203ENST00000402989 AFAP1L1Q8TED9 768 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 DCAF4Q8WV16 495 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 AGBL1Q96MI9 1066 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 PURBQ96QR8 312 aaKnown RBP4.77□□□□□ -1.65
SMC6-203ENST00000402989 ZNF577Q9BSK1 485 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 WDR18Q9BV38 432 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 TLR10Q9BXR5 811 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 ATF5Q9Y2D1 282 aaPredicted RBP4.77□□□□□ -1.65
SMC6-203ENST00000402989 CTDP1Q9Y5B0 961 aaPredicted RBP4.77□□□□□ -1.65
SMC6-203ENST00000402989 A0A1W2PQJ5 194 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 GOLGA6CA6NDK9 693 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 ATP8B1O43520 1251 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 ZEB2O60315 1214 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 EXOC3O60645 756 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 GOLGA6DP0CG33 693 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 PRKG1Q13976 671 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 ZCWPW2Q504Y3 356 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 HGSNATQ68CP4 663 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 CC2D2BQ6DHV5 1058 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 ZNF571Q7Z3V5 609 aaPredicted RBP4.77□□□□□ -1.65
SMC6-203ENST00000402989 PHLDB2Q86SQ0 1253 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 GLYCTKQ8IVS8 523 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 TRIM59Q8IWR1 403 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 FAM178BQ8IXR5 827 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 FAM186BQ8IYM0 893 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 OGFOD1Q8N543 542 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 ETNPPLQ8TBG4 499 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 HOOK2Q96ED9 719 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 ARHGEF10LQ9HCE6 1279 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 KCNMB3Q9NPA1 279 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 LUC7LQ9NQ29 371 aaKnown RBP4.77□□□□□ -1.65
SMC6-203ENST00000402989 GOLGA6AQ9NYA3 693 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 NYAP2Q9P242 653 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 LCMT1Q9UIC8 334 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 BRCA1P38398 1863 aaKnown RBP4.77□□□□□ -1.65
SMC6-203ENST00000402989 UBR3Q6ZT12 1888 aa4.77□□□□□ -1.65
SMC6-203ENST00000402989 ARHGEF35A5YM69 484 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms