RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 NAA35Q5VZE5 725 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 GBP6Q6ZN66 633 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 CEP63Q96MT8 703 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 SH2D3AQ9BRG2 576 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 ARHGEF10LQ9HCE6 1279 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 RBM12Q9NTZ6 932 aaKnown RBP8.42□□□□□ -1.06
HDAC9-201ENST00000401921 GCNT4Q9P109 453 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 NFU1Q9UMS0 254 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 EXOC3O60645 756 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 FOSP01100 380 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-201ENST00000401921 NMT1P30419 496 aaKnown RBP8.42□□□□□ -1.06
HDAC9-201ENST00000401921 IFI16Q16666 785 aaKnown RBP8.42□□□□□ -1.06
HDAC9-201ENST00000401921 ODR4Q5SWX8 454 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 WDR93Q6P2C0 686 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 ALKBH5Q6P6C2 394 aaKnown RBP8.42□□□□□ -1.06
HDAC9-201ENST00000401921 PEX26Q7Z412 305 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 DAAM2Q86T65 1068 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 FAM178BQ8IXR5 827 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 GOLGA5Q8TBA6 731 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 DCAF4Q8WV16 495 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 CEP89Q96ST8 783 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 LCMT1Q9UIC8 334 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 HPCAL4Q9UM19 191 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 SUGT1Q9Y2Z0 365 aa8.42□□□□□ -1.06
HDAC9-201ENST00000401921 ARHGEF35A5YM69 484 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 FLOT1O75955 427 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 ECE1P42892 770 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 CASP4P49662 377 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 STAT2P52630 851 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 TNNC1P63316 161 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 AP3B2Q13367 1082 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 ZC2HC1CQ53FD0 456 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-201ENST00000401921 SLC27A3Q5K4L6 730 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 GJB7Q6PEY0 223 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 COL23A1Q86Y22 540 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-201ENST00000401921 DYDC2Q96IM9 177 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 EIF2AK1Q9BQI3 630 aaKnown RBP8.41□□□□□ -1.06
HDAC9-201ENST00000401921 AP1M1Q9BXS5 423 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 PCIF1Q9H4Z3 704 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 CXorf56Q9H5V9 222 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 GOPCQ9HD26 462 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 STIM2Q9P246 746 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 SALL4Q9UJQ4 1053 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 FRMD4BQ9Y2L6 1034 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 RRP15Q9Y3B9 282 aaKnown RBP8.41□□□□□ -1.06
HDAC9-201ENST00000401921 GCOM1H8Y6P7 765 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-201ENST00000401921 ZBTB39O15060 712 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 LRRN2O75325 713 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 NR3C1P04150 777 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 POLR2MP0CAP2 368 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 STAT1P42224 750 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 SP4Q02446 784 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 KCNA1Q09470 495 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 STXBP4Q6ZWJ1 553 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 CREG2Q8IUH2 290 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 FAM186BQ8IYM0 893 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 BAP1Q92560 729 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 BCAS3Q9H6U6 928 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 NYAP2Q9P242 653 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 TSKSQ9UJT2 592 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 SSU72P8A0A1W2PR75 194 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 SHTN1A0MZ66 631 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 ZSCAN5CA6NGD5 496 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-201ENST00000401921 FAM86B1E9PN63 330 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 C21orf2O43822 256 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 H2AFZP0C0S5 128 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 FAM86B2P0C5J1 330 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 SNHG28P0DPA3 235 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 HPDP32754 393 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-201ENST00000401921 PTK2Q05397 1052 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 TNIP1Q15025 636 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 DLGAP5Q15398 846 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 SLC18A3Q16572 532 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 GRIPAP1Q4V328 841 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 CC2D2BQ6DHV5 1058 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 H2AFVQ71UI9 128 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 IKZF4Q9H2S9 585 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 EHMT1Q9H9B1 1298 aa8.41□□□□□ -1.06
HDAC9-201ENST00000401921 MSH4O15457 936 aa8.4□□□□□ -1.06
HDAC9-201ENST00000401921 KRT13P13646 458 aa8.4□□□□□ -1.06
HDAC9-201ENST00000401921 UCHL3P15374 230 aa8.4□□□□□ -1.06
HDAC9-201ENST00000401921 TNFAIP3P21580 790 aa8.4□□□□□ -1.06
HDAC9-201ENST00000401921 EPHB4P54760 987 aa8.4□□□□□ -1.06
HDAC9-201ENST00000401921 CDK17Q00537 523 aa8.4□□□□□ -1.06
HDAC9-201ENST00000401921 PAK2Q13177 524 aa8.4□□□□□ -1.06
HDAC9-201ENST00000401921 GIT2Q14161 759 aa8.4□□□□□ -1.06
HDAC9-201ENST00000401921 ACER1Q8TDN7 264 aa8.4□□□□□ -1.06
HDAC9-201ENST00000401921 PRMT6Q96LA8 375 aaPredicted RBP8.4□□□□□ -1.06
HDAC9-201ENST00000401921 ZNF577Q9BSK1 485 aa8.4□□□□□ -1.06
HDAC9-201ENST00000401921 RUSC1Q9BVN2 902 aa8.4□□□□□ -1.06
HDAC9-201ENST00000401921 PRR12Q9ULL5 1215 aa8.4□□□□□ -1.06
HDAC9-201ENST00000401921 SUFUQ9UMX1 484 aa8.4□□□□□ -1.06
HDAC9-201ENST00000401921 TARSL2A2RTX5 802 aaKnown RBP8.4□□□□□ -1.07
HDAC9-201ENST00000401921 MEIS2O14770 477 aa8.4□□□□□ -1.07
HDAC9-201ENST00000401921 TRIM49P0CI25 452 aa8.4□□□□□ -1.07
HDAC9-201ENST00000401921 TRIM49CP0CI26 452 aa8.4□□□□□ -1.07
HDAC9-201ENST00000401921 RPA1P27694 616 aa8.4□□□□□ -1.07
HDAC9-201ENST00000401921 CARSP49589 748 aaKnown RBP8.4□□□□□ -1.07
HDAC9-201ENST00000401921 GNGT1P63211 74 aa8.4□□□□□ -1.07
HDAC9-201ENST00000401921 LLGL1Q15334 1064 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms