RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 PADI3Q9ULW8 664 aa13.65□□□□□ -0.22
LINC00544-201ENST00000400540 PCDHGC5Q9Y5F6 944 aa13.65□□□□□ -0.22
LINC00544-201ENST00000400540 CNTNAP5Q8WYK1 1306 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 IGSF9BQ9UPX0 1349 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 NCK2O43639 380 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 ARP10275 920 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 LIFRP42702 1097 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 ACTR2P61160 394 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 ITGB3BPQ13352 177 aaPredicted RBP13.64□□□□□ -0.23
LINC00544-201ENST00000400540 SMAD4Q13485 552 aaKnown RBP13.64□□□□□ -0.23
LINC00544-201ENST00000400540 TMEM266Q2M3C6 531 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 IER5Q5VY09 327 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 HFE2Q6ZVN8 426 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 NPAS4Q8IUM7 802 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 CMTR2Q8IYT2 770 aaKnown RBP13.64□□□□□ -0.23
LINC00544-201ENST00000400540 KLHL23Q8NBE8 558 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 SPPL3Q8TCT6 385 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 MXRA8Q9BRK3 442 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 PLVAPQ9BX97 442 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 TMX1Q9H3N1 280 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 CD207Q9UJ71 328 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 PCDHA2Q9Y5H9 948 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 SLC12A7Q9Y666 1083 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 PIEZO1Q92508 2521 aa13.64□□□□□ -0.23
LINC00544-201ENST00000400540 DMDP11532 3685 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 RRN3P2A6NIE6 340 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 MGEA5O60502 916 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 CALM1P0DP23 149 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 CALM2P0DP24 149 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 CALM3P0DP25 149 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 SCG2P13521 617 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 NDUFV1P49821 464 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 PAK2Q13177 524 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 ADAM15Q13444 863 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 CREB3L3Q68CJ9 461 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 RNF135Q8IUD6 432 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 FANCBQ8NB91 859 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 POF1BQ8WVV4 589 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 P2RX5Q93086 422 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 MSLNLQ96KJ4 702 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 FBXL18Q96ME1 805 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 FTHL17Q9BXU8 183 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 CELF4Q9BZC1 486 aaKnown RBP13.63□□□□□ -0.23
LINC00544-201ENST00000400540 AZI2Q9H6S1 392 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 CLEC1BQ9P126 229 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 HCSTQ9UBK5 93 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 NFASCO94856 1347 aa13.63□□□□□ -0.23
LINC00544-201ENST00000400540 M0QZ92 97 aa13.62□□□□□ -0.23
LINC00544-201ENST00000400540 DDX39AO00148 427 aaKnown RBP13.62□□□□□ -0.23
LINC00544-201ENST00000400540 STXBP3O00186 592 aa13.62□□□□□ -0.23
LINC00544-201ENST00000400540 MAFGO15525 162 aa13.62□□□□□ -0.23
LINC00544-201ENST00000400540 GLP2RO95838 553 aa13.62□□□□□ -0.23
LINC00544-201ENST00000400540 STAT5BP51692 787 aa13.62□□□□□ -0.23
LINC00544-201ENST00000400540 NHLH1Q02575 133 aa13.62□□□□□ -0.23
LINC00544-201ENST00000400540 MTHFD1LQ6UB35 978 aa13.62□□□□□ -0.23
LINC00544-201ENST00000400540 RBM23Q86U06 439 aaKnown RBP13.62□□□□□ -0.23
LINC00544-201ENST00000400540 TMTC2Q8N394 836 aa13.62□□□□□ -0.23
LINC00544-201ENST00000400540 TCEANC2Q96MN5 208 aa13.62□□□□□ -0.23
LINC00544-201ENST00000400540 SDF4Q9BRK5 362 aa13.62□□□□□ -0.23
LINC00544-201ENST00000400540 ANO3Q9BYT9 981 aa13.62□□□□□ -0.23
LINC00544-201ENST00000400540 CDHR5Q9HBB8 845 aa13.62□□□□□ -0.23
LINC00544-201ENST00000400540 AGO4Q9HCK5 861 aaKnown RBP13.62□□□□□ -0.23
LINC00544-201ENST00000400540 TMEM260Q9NX78 707 aa13.62□□□□□ -0.23
LINC00544-201ENST00000400540 BARX2Q9UMQ3 279 aaPredicted RBP13.62□□□□□ -0.23
LINC00544-201ENST00000400540 SQORQ9Y6N5 450 aa13.62□□□□□ -0.23
LINC00544-201ENST00000400540 SMIM35A0A1B0GVV1 85 aa13.61□□□□□ -0.23
LINC00544-201ENST00000400540 PPFIA3O75145 1194 aa13.61□□□□□ -0.23
LINC00544-201ENST00000400540 CCNE2O96020 404 aa13.61□□□□□ -0.23
LINC00544-201ENST00000400540 NRIP1P48552 1158 aa13.61□□□□□ -0.23
LINC00544-201ENST00000400540 NAPAP54920 295 aa13.61□□□□□ -0.23
LINC00544-201ENST00000400540 RBM10P98175 930 aaKnown RBP13.61□□□□□ -0.23
LINC00544-201ENST00000400540 KRT76Q01546 638 aa13.61□□□□□ -0.23
LINC00544-201ENST00000400540 NFX1Q12986 1120 aaKnown RBP13.61□□□□□ -0.23
LINC00544-201ENST00000400540 NECTIN1Q15223 517 aa13.61□□□□□ -0.23
LINC00544-201ENST00000400540 HERC4Q5GLZ8 1057 aaPredicted RBP13.61□□□□□ -0.23
LINC00544-201ENST00000400540 PLPPR4Q7Z2D5 763 aa13.61□□□□□ -0.23
LINC00544-201ENST00000400540 SGMS1Q86VZ5 419 aa13.61□□□□□ -0.23
LINC00544-201ENST00000400540 EFHBQ8N7U6 833 aa13.61□□□□□ -0.23
LINC00544-201ENST00000400540 TMEM40Q8WWA1 233 aa13.61□□□□□ -0.23
LINC00544-201ENST00000400540 PPP1R16BQ96T49 567 aa13.61□□□□□ -0.23
LINC00544-201ENST00000400540 POP1Q99575 1024 aaKnown RBP13.61□□□□□ -0.23
LINC00544-201ENST00000400540 ESYT1Q9BSJ8 1104 aa13.61□□□□□ -0.23
LINC00544-201ENST00000400540 UPF3BQ9BZI7 483 aaKnown RBP13.61□□□□□ -0.23
LINC00544-201ENST00000400540 RIC8AQ9NPQ8 531 aa13.61□□□□□ -0.23
LINC00544-201ENST00000400540 GINS2Q9Y248 185 aa13.61□□□□□ -0.23
LINC00544-201ENST00000400540 KDM3AQ9Y4C1 1321 aa13.61□□□□□ -0.23
LINC00544-201ENST00000400540 ATG7O95352 703 aa13.6□□□□□ -0.23
LINC00544-201ENST00000400540 EYA4O95677 639 aa13.6□□□□□ -0.23
LINC00544-201ENST00000400540 RPLP2P05387 115 aaKnown RBP13.6□□□□□ -0.23
LINC00544-201ENST00000400540 STAG3L1P0CL83 205 aa13.6□□□□□ -0.23
LINC00544-201ENST00000400540 KLRC1P26715 233 aa13.6□□□□□ -0.23
LINC00544-201ENST00000400540 MRE11P49959 708 aa13.6□□□□□ -0.23
LINC00544-201ENST00000400540 ADCY7P51828 1080 aa13.6□□□□□ -0.23
LINC00544-201ENST00000400540 FUT2Q10981 343 aa13.6□□□□□ -0.23
LINC00544-201ENST00000400540 CEP55Q53EZ4 464 aa13.6□□□□□ -0.23
LINC00544-201ENST00000400540 NAALADL2Q58DX5 795 aa13.6□□□□□ -0.23
LINC00544-201ENST00000400540 APOA5Q6Q788 366 aa13.6□□□□□ -0.23
LINC00544-201ENST00000400540 CCDC60Q8IWA6 550 aaPredicted RBP13.6□□□□□ -0.23
LINC00544-201ENST00000400540 SMRP1Q8NCR6 262 aa13.6□□□□□ -0.23
LINC00544-201ENST00000400540 ERVK-5Q9HDB9 667 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms