RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 AKAP4Q5JQC9 854 aa18.01■□□□□ 0.47
NPRL3-201ENST00000399953 PDXDC1Q6P996 788 aa18.01■□□□□ 0.47
NPRL3-201ENST00000399953 CCDC84Q86UT8 332 aaPredicted RBP18.01■□□□□ 0.47
NPRL3-201ENST00000399953 BAP1Q92560 729 aa18.01■□□□□ 0.47
NPRL3-201ENST00000399953 EPB41L4BQ9H329 900 aa18.01■□□□□ 0.47
NPRL3-201ENST00000399953 STOML1Q9UBI4 398 aa18.01■□□□□ 0.47
NPRL3-201ENST00000399953 ABCF2Q9UG63 623 aa18.01■□□□□ 0.47
NPRL3-201ENST00000399953 SMIM23A6NLE4 172 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 H0Y3Z8 333 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 KRIT1O00522 736 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 TTI1O43156 1089 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 TJP3O95049 919 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 SH3BGRP55822 239 aaPredicted RBP18■□□□□ 0.47
NPRL3-201ENST00000399953 RASIP1Q5U651 963 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 RNF43Q68DV7 783 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 TAOK1Q7L7X3 1001 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 CCNJLQ8IV13 435 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 SUPT20HQ8NEM7 779 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 RMDN2Q96LZ7 410 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 BUD13Q9BRD0 619 aaKnown RBP eCLIP18■□□□□ 0.475e-9■■□□□ 13.4
NPRL3-201ENST00000399953 CCDC87Q9NVE4 849 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 KLHL14Q9P2G3 628 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 NOC2LQ9Y3T9 749 aaKnown RBP18■□□□□ 0.47
NPRL3-201ENST00000399953 NFAT5O94916 1531 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 ATP9AO75110 1047 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 TMCC1O94876 653 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 AFPP02771 609 aaKnown RBP18■□□□□ 0.47
NPRL3-201ENST00000399953 HGSNATQ68CP4 663 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 CEP128Q6ZU80 1094 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 XAGE3Q8WTP9 111 aa18■□□□□ 0.47
NPRL3-201ENST00000399953 SIGLEC16A6NMB1 481 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 KLRC4O43908 158 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 PFDN1O60925 122 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 CCDC166P0CW27 439 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 PMS2P54278 862 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 RNASELQ05823 741 aaKnown RBP17.99■□□□□ 0.47
NPRL3-201ENST00000399953 TMEM62Q0P6H9 643 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 PABPC4Q13310 644 aaKnown RBP eCLIP17.99■□□□□ 0.471e-6■■□□□ 12.5
NPRL3-201ENST00000399953 SLC39A6Q13433 755 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 SLC9C1Q4G0N8 1177 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 VWA3BQ502W6 1294 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 ANKRD40Q6AI12 368 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 CFAP61Q8NHU2 1237 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 ANKS1AQ92625 1134 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 LZTS2Q9BRK4 669 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 DCLRE1BQ9H816 532 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 BZW2Q9Y6E2 419 aaKnown RBP17.99■□□□□ 0.47
NPRL3-201ENST00000399953 RBM47A0AV96 593 aaKnown RBP17.99■□□□□ 0.47
NPRL3-201ENST00000399953 PALM3A6NDB9 673 aaPredicted RBP17.99■□□□□ 0.47
NPRL3-201ENST00000399953 RPL13P26373 211 aaKnown RBP17.99■□□□□ 0.47
NPRL3-201ENST00000399953 USP11P51784 963 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 TCIRG1Q13488 830 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 PROSER2Q86WR7 435 aaPredicted RBP17.99■□□□□ 0.47
NPRL3-201ENST00000399953 TMEM237Q96Q45 408 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 ZSWIM5Q9P217 1185 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 TMEM94Q12767 1356 aa17.99■□□□□ 0.47
NPRL3-201ENST00000399953 PXDNQ92626 1479 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 ARHGAP23Q9P227 1491 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 USP46P62068 366 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 MPP3Q13368 585 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 SH2D4BQ5SQS7 431 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 ZNF530Q6P9A1 599 aaPredicted RBP17.98■□□□□ 0.47
NPRL3-201ENST00000399953 RNF168Q8IYW5 571 aaPredicted RBP17.98■□□□□ 0.47
NPRL3-201ENST00000399953 FBXO41Q8TF61 875 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 PHF20Q9BVI0 1012 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 CCDC113Q9H0I3 377 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 CIDEBQ9UHD4 219 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 PNPLA7Q6ZV29 1317 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 DIP2BQ9P265 1576 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 MYH4Q9Y623 1939 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 A0A087WZG4 1122 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 MYL6BP14649 208 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 RASA1P20936 1047 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 BPIFB4P59827 614 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 ZRSR2Q15696 482 aaKnown RBP17.98■□□□□ 0.47
NPRL3-201ENST00000399953 DNAJC14Q6Y2X3 702 aaPredicted RBP17.98■□□□□ 0.47
NPRL3-201ENST00000399953 COPS6Q7L5N1 327 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 LRRC8CQ8TDW0 803 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 INPP5DQ92835 1189 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 GATA6Q92908 595 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 SHISA4Q96DD7 197 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 SPATA16Q9BXB7 569 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 RPL26L1Q9UNX3 145 aaKnown RBP17.98■□□□□ 0.47
NPRL3-201ENST00000399953 COMMD3-BMI1R4GMX3 469 aa17.98■□□□□ 0.47
NPRL3-201ENST00000399953 ROBO2Q9HCK4 1378 aa17.97■□□□□ 0.47
NPRL3-201ENST00000399953 LRP6O75581 1613 aa17.97■□□□□ 0.47
NPRL3-201ENST00000399953 HGSO14964 777 aaPredicted RBP17.97■□□□□ 0.47
NPRL3-201ENST00000399953 OCRLQ01968 901 aa17.97■□□□□ 0.47
NPRL3-201ENST00000399953 LSAMPQ13449 338 aa17.97■□□□□ 0.47
NPRL3-201ENST00000399953 ZC3H18Q86VM9 953 aaKnown RBP17.97■□□□□ 0.47
NPRL3-201ENST00000399953 HAPLN3Q96S86 360 aa17.97■□□□□ 0.47
NPRL3-201ENST00000399953 EDEM3Q9BZQ6 932 aa17.97■□□□□ 0.47
NPRL3-201ENST00000399953 RHBDL2Q9NX52 303 aa17.97■□□□□ 0.47
NPRL3-201ENST00000399953 PCDH11XQ9BZA7 1347 aa17.97■□□□□ 0.47
NPRL3-201ENST00000399953 NKRFO15226 690 aaKnown RBP eCLIP17.97■□□□□ 0.47
NPRL3-201ENST00000399953 MAFGO15525 162 aa17.97■□□□□ 0.47
NPRL3-201ENST00000399953 RNMTO43148 476 aaKnown RBP17.97■□□□□ 0.47
NPRL3-201ENST00000399953 IL17AQ16552 155 aa17.97■□□□□ 0.47
NPRL3-201ENST00000399953 TTC8Q8TAM2 541 aa17.97■□□□□ 0.47
NPRL3-201ENST00000399953 NAP1L3Q99457 506 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms