RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 TRMT1LQ7Z2T5 733 aaKnown RBP12.96□□□□□ -0.33
COL25A1-202ENST00000399127 NEK11Q8NG66 645 aa12.96□□□□□ -0.33
COL25A1-202ENST00000399127 NAPGQ99747 312 aaPredicted RBP12.96□□□□□ -0.33
COL25A1-202ENST00000399127 WDR11Q9BZH6 1224 aa12.96□□□□□ -0.33
COL25A1-202ENST00000399127 HDAC6Q9UBN7 1215 aa12.96□□□□□ -0.33
COL25A1-202ENST00000399127 PLAGL2Q9UPG8 496 aa12.96□□□□□ -0.33
COL25A1-202ENST00000399127 MACROD2A1Z1Q3 448 aa12.96□□□□□ -0.34
COL25A1-202ENST00000399127 KRT83P78385 493 aa12.96□□□□□ -0.34
COL25A1-202ENST00000399127 PPP2R5CQ13362 524 aa12.96□□□□□ -0.34
COL25A1-202ENST00000399127 GPR162Q16538 588 aa12.96□□□□□ -0.34
COL25A1-202ENST00000399127 APOBEC3FQ8IUX4 373 aaKnown RBP12.96□□□□□ -0.34
COL25A1-202ENST00000399127 KSR1Q8IVT5 923 aa12.96□□□□□ -0.34
COL25A1-202ENST00000399127 TRIM59Q8IWR1 403 aa12.96□□□□□ -0.34
COL25A1-202ENST00000399127 ZKSCAN4Q969J2 545 aaPredicted RBP12.96□□□□□ -0.34
COL25A1-202ENST00000399127 JAKMIP2Q96AA8 810 aa12.96□□□□□ -0.34
COL25A1-202ENST00000399127 CEP63Q96MT8 703 aa12.96□□□□□ -0.34
COL25A1-202ENST00000399127 PURBQ96QR8 312 aaKnown RBP12.96□□□□□ -0.34
COL25A1-202ENST00000399127 EHMT1Q9H9B1 1298 aa12.96□□□□□ -0.34
COL25A1-202ENST00000399127 ZNF446Q9NWS9 450 aa12.96□□□□□ -0.34
COL25A1-202ENST00000399127 CETN3O15182 167 aa12.95□□□□□ -0.34
COL25A1-202ENST00000399127 WDR46O15213 610 aaKnown RBP12.95□□□□□ -0.34
COL25A1-202ENST00000399127 CLIC2O15247 247 aa12.95□□□□□ -0.34
COL25A1-202ENST00000399127 VCAM1P19320 739 aa12.95□□□□□ -0.34
COL25A1-202ENST00000399127 NMT1P30419 496 aaKnown RBP12.95□□□□□ -0.34
COL25A1-202ENST00000399127 EIF4A3P38919 411 aaKnown RBP12.95□□□□□ -0.34
COL25A1-202ENST00000399127 CLCN6P51797 869 aa12.95□□□□□ -0.34
COL25A1-202ENST00000399127 SPP2Q13103 211 aa12.95□□□□□ -0.34
COL25A1-202ENST00000399127 KNOP1Q1ED39 458 aaKnown RBP12.95□□□□□ -0.34
COL25A1-202ENST00000399127 ZC2HC1CQ53FD0 456 aaPredicted RBP12.95□□□□□ -0.34
COL25A1-202ENST00000399127 MYCT1Q8N699 235 aa12.95□□□□□ -0.34
COL25A1-202ENST00000399127 CLEC4DQ8WXI8 215 aa12.95□□□□□ -0.34
COL25A1-202ENST00000399127 BAP1Q92560 729 aa12.95□□□□□ -0.34
COL25A1-202ENST00000399127 WNK4Q96J92 1243 aa12.95□□□□□ -0.34
COL25A1-202ENST00000399127 LSM14BQ9BX40 385 aaKnown RBP12.95□□□□□ -0.34
COL25A1-202ENST00000399127 HAUS4Q9H6D7 363 aa12.95□□□□□ -0.34
COL25A1-202ENST00000399127 CDC23Q9UJX2 597 aa12.95□□□□□ -0.34
COL25A1-202ENST00000399127 H2AFXP16104 143 aaPredicted RBP12.95□□□□□ -0.34
COL25A1-202ENST00000399127 EIF2AK2P19525 551 aaKnown RBP12.95□□□□□ -0.34
COL25A1-202ENST00000399127 HSD17B4P51659 736 aa12.95□□□□□ -0.34
COL25A1-202ENST00000399127 ENOX2Q16206 610 aaKnown RBP12.95□□□□□ -0.34
COL25A1-202ENST00000399127 DLK2Q6UY11 383 aa12.95□□□□□ -0.34
COL25A1-202ENST00000399127 EPM2AIP1Q7L775 607 aaPredicted RBP12.95□□□□□ -0.34
COL25A1-202ENST00000399127 NCAPGQ9BPX3 1015 aa12.95□□□□□ -0.34
COL25A1-202ENST00000399127 LXNQ9BS40 222 aa12.95□□□□□ -0.34
COL25A1-202ENST00000399127 DEF6Q9H4E7 631 aa12.95□□□□□ -0.34
COL25A1-202ENST00000399127 KCNH7Q9NS40 1196 aa12.95□□□□□ -0.34
COL25A1-202ENST00000399127 STK24Q9Y6E0 443 aa12.95□□□□□ -0.34
COL25A1-202ENST00000399127 EIF3CLB5ME19 914 aaKnown RBP12.94□□□□□ -0.34
COL25A1-202ENST00000399127 NOL4O94818 638 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 FAM13AO94988 1023 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 HOXA7P31268 230 aaPredicted RBP12.94□□□□□ -0.34
COL25A1-202ENST00000399127 CASP4P49662 377 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 CHMP4BP1P59074 171 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 POLR2FP61218 127 aaKnown RBP12.94□□□□□ -0.34
COL25A1-202ENST00000399127 ARID5AQ03989 594 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 DCAF15Q66K64 600 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 FOXR2Q6PJQ5 311 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 MAEAQ7L5Y9 396 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 CCDC170Q8IYT3 715 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 EIF3CQ99613 913 aaKnown RBP12.94□□□□□ -0.34
COL25A1-202ENST00000399127 SH2D3AQ9BRG2 576 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 MXRA8Q9BRK3 442 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 TEKT3Q9BXF9 490 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 KIAA1683Q9H0B3 1180 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 RPAP3Q9H6T3 665 aaPredicted RBP12.94□□□□□ -0.34
COL25A1-202ENST00000399127 TUFT1Q9NNX1 390 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 AKR1B10O60218 316 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 CTNND1O60716 968 aaKnown RBP12.94□□□□□ -0.34
COL25A1-202ENST00000399127 GNA14O95837 355 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 KIF11P52732 1056 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 KCNH2Q12809 1159 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 SPA17Q15506 151 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 EDRF1Q3B7T1 1238 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 DCAF17Q5H9S7 520 aaPredicted RBP12.94□□□□□ -0.34
COL25A1-202ENST00000399127 C1orf186Q6ZWK4 172 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 RSRC2Q7L4I2 434 aaKnown RBP12.94□□□□□ -0.34
COL25A1-202ENST00000399127 LPAR1Q92633 364 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 WRNIP1Q96S55 665 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 RASSF4Q9H2L5 321 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 SLC38A10Q9HBR0 1119 aa12.94□□□□□ -0.34
COL25A1-202ENST00000399127 ASTN1O14525 1302 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 KRT86O43790 486 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 AKAP3O75969 853 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 ATP1A1P05023 1023 aaKnown RBP12.93□□□□□ -0.34
COL25A1-202ENST00000399127 SETQ01105 290 aaPredicted RBP12.93□□□□□ -0.34
COL25A1-202ENST00000399127 TDRD12Q587J7 1177 aaKnown RBP12.93□□□□□ -0.34
COL25A1-202ENST00000399127 TCERG1LQ5VWI1 586 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 SRGAP1Q7Z6B7 1085 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 TAAR1Q96RJ0 339 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 IFIH1Q9BYX4 1025 aaKnown RBP12.93□□□□□ -0.34
COL25A1-202ENST00000399127 MYO1AQ9UBC5 1043 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 ARMCX3Q9UH62 379 aaPredicted RBP12.93□□□□□ -0.34
COL25A1-202ENST00000399127 SAMM50Q9Y512 469 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 CTDP1Q9Y5B0 961 aaPredicted RBP12.93□□□□□ -0.34
COL25A1-202ENST00000399127 RBBP6Q7Z6E9 1792 aaKnown RBP12.93□□□□□ -0.34
COL25A1-202ENST00000399127 SRGAP2O75044 1071 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 SEC31AO94979 1220 aaKnown RBP12.93□□□□□ -0.34
COL25A1-202ENST00000399127 NR3C1P04150 777 aa12.93□□□□□ -0.34
COL25A1-202ENST00000399127 MYCLP12524 364 aaPredicted RBP12.93□□□□□ -0.34
COL25A1-202ENST00000399127 ACTN1P12814 892 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms