RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 PPIL2Q13356 520 aa16.75■□□□□ 0.27
COL25A1-201ENST00000399126 LRRC55Q6ZSA7 311 aa16.75■□□□□ 0.27
COL25A1-201ENST00000399126 C1orf186Q6ZWK4 172 aa16.75■□□□□ 0.27
COL25A1-201ENST00000399126 TMEM139Q8IV31 216 aa16.75■□□□□ 0.27
COL25A1-201ENST00000399126 TUBGCP2Q9BSJ2 902 aa16.75■□□□□ 0.27
COL25A1-201ENST00000399126 MKRN3Q13064 507 aaKnown RBP16.75■□□□□ 0.27
COL25A1-201ENST00000399126 ZCWPW2Q504Y3 356 aa16.75■□□□□ 0.27
COL25A1-201ENST00000399126 ARMC9Q7Z3E5 817 aa16.75■□□□□ 0.27
COL25A1-201ENST00000399126 NCAPG2Q86XI2 1143 aa16.75■□□□□ 0.27
COL25A1-201ENST00000399126 ANKRD35Q8N283 1001 aa16.75■□□□□ 0.27
COL25A1-201ENST00000399126 ANKRD20A12PQ8NF67 263 aa16.75■□□□□ 0.27
COL25A1-201ENST00000399126 SPATC1LQ9H0A9 340 aa16.75■□□□□ 0.27
COL25A1-201ENST00000399126 IKZF4Q9H2S9 585 aa16.75■□□□□ 0.27
COL25A1-201ENST00000399126 CXCL11O14625 94 aa16.74■□□□□ 0.27
COL25A1-201ENST00000399126 GYPCP04921 128 aa16.74■□□□□ 0.27
COL25A1-201ENST00000399126 PPP1R2P41236 205 aa16.74■□□□□ 0.27
COL25A1-201ENST00000399126 KCNA1Q09470 495 aa16.74■□□□□ 0.27
COL25A1-201ENST00000399126 PNMA8AQ86V59 439 aaPredicted RBP16.74■□□□□ 0.27
COL25A1-201ENST00000399126 INPP4AQ96PE3 977 aaPredicted RBP16.74■□□□□ 0.27
COL25A1-201ENST00000399126 MAGEC2Q9UBF1 373 aaPredicted RBP16.74■□□□□ 0.27
COL25A1-201ENST00000399126 AGTPBP1Q9UPW5 1226 aa16.74■□□□□ 0.27
COL25A1-201ENST00000399126 HOXD13P35453 343 aa16.74■□□□□ 0.27
COL25A1-201ENST00000399126 FXR1P51114 621 aaKnown RBP eCLIP16.74■□□□□ 0.27
COL25A1-201ENST00000399126 SP4Q02446 784 aa16.74■□□□□ 0.27
COL25A1-201ENST00000399126 LDLRAD1Q5T700 205 aa16.74■□□□□ 0.27
COL25A1-201ENST00000399126 NACC1Q96RE7 527 aa16.74■□□□□ 0.27
COL25A1-201ENST00000399126 MOV10L1Q9BXT6 1211 aaKnown RBP16.74■□□□□ 0.27
COL25A1-201ENST00000399126 TMX1Q9H3N1 280 aa16.74■□□□□ 0.27
COL25A1-201ENST00000399126 GEMIN8Q9NWZ8 242 aaKnown RBP16.74■□□□□ 0.27
COL25A1-201ENST00000399126 CCDC66A2RUB6 948 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 LGALS16A8MUM7 142 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 PRPF6O94906 941 aaKnown RBP16.73■□□□□ 0.27
COL25A1-201ENST00000399126 CASP14P31944 242 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 MTIF2P46199 727 aaKnown RBP16.73■□□□□ 0.27
COL25A1-201ENST00000399126 Q3C1V9 767 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 MIIPQ5JXC2 388 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 E4F1Q66K89 784 aaPredicted RBP16.73■□□□□ 0.27
COL25A1-201ENST00000399126 MAEAQ7L5Y9 396 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 ZNF507Q8TCN5 953 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 C16orf45Q96MC5 204 aaPredicted RBP16.73■□□□□ 0.27
COL25A1-201ENST00000399126 KCTD10Q9H3F6 313 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 TBC1D22BQ9NU19 505 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 TBCAO75347 108 aaKnown RBP16.73■□□□□ 0.27
COL25A1-201ENST00000399126 KLK7P49862 253 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 GPAT2Q6NUI2 795 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 RINLQ6ZS11 566 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 RIOX2Q8IUF8 465 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 CHST13Q8NET6 341 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 MYRIPQ8NFW9 859 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 NOC3LQ8WTT2 800 aaKnown RBP16.73■□□□□ 0.27
COL25A1-201ENST00000399126 P4HBP07237 508 aaKnown RBP16.73■□□□□ 0.27
COL25A1-201ENST00000399126 KCNA2P16389 499 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 LRRC63Q05C16 580 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 EGFL6Q8IUX8 553 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 KSR1Q8IVT5 923 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 MB21D1Q8N884 522 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 RBPJLQ9UBG7 517 aa16.73■□□□□ 0.27
COL25A1-201ENST00000399126 NMT1P30419 496 aaKnown RBP16.72■□□□□ 0.27
COL25A1-201ENST00000399126 TSPYL1Q9H0U9 437 aa16.72■□□□□ 0.27
COL25A1-201ENST00000399126 MRPL44Q9H9J2 332 aaKnown RBP16.72■□□□□ 0.27
COL25A1-201ENST00000399126 CYP2C8P10632 490 aa16.72■□□□□ 0.27
COL25A1-201ENST00000399126 QARSP47897 775 aaKnown RBP16.72■□□□□ 0.27
COL25A1-201ENST00000399126 SP2Q02086 613 aa16.72■□□□□ 0.27
COL25A1-201ENST00000399126 EPM2AIP1Q7L775 607 aaPredicted RBP16.72■□□□□ 0.27
COL25A1-201ENST00000399126 GPRASP2Q96D09 838 aa16.72■□□□□ 0.27
COL25A1-201ENST00000399126 NOC4LQ9BVI4 516 aaKnown RBP16.72■□□□□ 0.27
COL25A1-201ENST00000399126 ZSWIM4Q9H7M6 989 aa16.72■□□□□ 0.27
COL25A1-201ENST00000399126 RRAGCQ9HB90 399 aa16.72■□□□□ 0.27
COL25A1-201ENST00000399126 MCM3APO60318 1980 aa16.71■□□□□ 0.27
COL25A1-201ENST00000399126 LOXHD1Q8IVV2 1947 aa16.71■□□□□ 0.27
COL25A1-201ENST00000399126 PGK2P07205 417 aa16.71■□□□□ 0.27
COL25A1-201ENST00000399126 ZC2HC1CQ53FD0 456 aaPredicted RBP16.71■□□□□ 0.27
COL25A1-201ENST00000399126 PLA2G4FQ68DD2 849 aa16.71■□□□□ 0.27
COL25A1-201ENST00000399126 NLRX1Q86UT6 975 aa16.71■□□□□ 0.27
COL25A1-201ENST00000399126 PPFIBP1Q86W92 1011 aa16.71■□□□□ 0.27
COL25A1-201ENST00000399126 DAW1Q8N136 415 aa16.71■□□□□ 0.27
COL25A1-201ENST00000399126 CCAR2Q8N163 923 aaKnown RBP16.71■□□□□ 0.27
COL25A1-201ENST00000399126 MYCT1Q8N699 235 aa16.71■□□□□ 0.27
COL25A1-201ENST00000399126 SLC10A4Q96EP9 437 aa16.71■□□□□ 0.27
COL25A1-201ENST00000399126 ARHGEF35A5YM69 484 aa16.71■□□□□ 0.26
COL25A1-201ENST00000399126 SOWAHBA6NEL2 793 aa16.71■□□□□ 0.26
COL25A1-201ENST00000399126 AKR1B15C9JRZ8 316 aaPredicted RBP16.71■□□□□ 0.26
COL25A1-201ENST00000399126 MFAP3LO75121 409 aa16.71■□□□□ 0.26
COL25A1-201ENST00000399126 FAM13AO94988 1023 aa16.71■□□□□ 0.26
COL25A1-201ENST00000399126 GCNT3O95395 438 aa16.71■□□□□ 0.26
COL25A1-201ENST00000399126 XRRA1Q6P2D8 792 aa16.71■□□□□ 0.26
COL25A1-201ENST00000399126 PADI6Q6TGC4 694 aa16.71■□□□□ 0.26
COL25A1-201ENST00000399126 TSG101Q99816 390 aa16.71■□□□□ 0.26
COL25A1-201ENST00000399126 BAG1Q99933 345 aaPredicted RBP16.71■□□□□ 0.26
COL25A1-201ENST00000399126 COL4A3BPQ9Y5P4 624 aa16.71■□□□□ 0.26
COL25A1-201ENST00000399126 ITIH6Q6UXX5 1313 aa16.7■□□□□ 0.26
COL25A1-201ENST00000399126 WDR64B1ANS9 1081 aa16.7■□□□□ 0.26
COL25A1-201ENST00000399126 MUTP22033 750 aa16.7■□□□□ 0.26
COL25A1-201ENST00000399126 RARRES1P49788 294 aa16.7■□□□□ 0.26
COL25A1-201ENST00000399126 ALDH5A1P51649 535 aaPredicted RBP16.7■□□□□ 0.26
COL25A1-201ENST00000399126 MTF1Q14872 753 aa16.7■□□□□ 0.26
COL25A1-201ENST00000399126 FAM114A1Q8IWE2 563 aa16.7■□□□□ 0.26
COL25A1-201ENST00000399126 NEK9Q8TD19 979 aa16.7■□□□□ 0.26
COL25A1-201ENST00000399126 FIZ1Q96SL8 496 aa16.7■□□□□ 0.26
COL25A1-201ENST00000399126 HIP1RO75146 1068 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms