RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ART3Q13508 389 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 RTKN2Q8IZC4 609 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 KIRREL3Q8IZU9 778 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 KLHL29Q96CT2 875 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 ANO3Q9BYT9 981 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 ABHD10Q9NUJ1 306 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 CPSF3Q9UKF6 684 aaKnown RBP8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 METP08581 1390 aa8.99□□□□□ -0.97
SPTLC3-201ENST00000399002 SPECC1L-ADORA2AF8WAN1 911 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 AP3B1O00203 1094 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 SMIM24O75264 130 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 SEC31AO94979 1220 aaKnown RBP8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 PAPOLAP51003 745 aaKnown RBP8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 PTPN12Q05209 780 aaKnown RBP8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 RASIP1Q5U651 963 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 PDCD7Q8N8D1 485 aaKnown RBP8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 GRAMD1AQ96CP6 724 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 SPDL1Q96EA4 605 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 FAM20AQ96MK3 541 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 PPCSQ9HAB8 311 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 A0A1W2PQC6 194 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 HGSO14964 777 aaPredicted RBP8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 SLC16A3O15427 465 aaKnown RBP8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 MX2P20592 715 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 KCNJ6P48051 423 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 PKP1Q13835 747 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 GRM4Q14833 912 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 PDIK1LQ8N165 341 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 MCPH1Q8NEM0 835 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 ZBTB18Q99592 522 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 BEGAINQ9BUH8 593 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 SUGCTQ9HAC7 445 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 TBC1D22BQ9NU19 505 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 SPDYE16A6NNV3 312 aaPredicted RBP8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 FDX1P10109 184 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 DDX5P17844 614 aaKnown RBP8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 SPDYE2Q495Y8 402 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 TBC1D9BQ66K14 1250 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 NBPF10Q6P3W6 841 aaKnown RBP8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 ACRBPQ8NEB7 543 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 SCG3Q8WXD2 468 aaKnown RBP8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 TRAIPQ9BWF2 469 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 WNT8AQ9H1J5 351 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 C2orf40Q9H1Z8 148 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 ZNF212Q9UDV6 495 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 TRPC5Q9UL62 973 aaPredicted RBP8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 TFDP2Q14188 446 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 RCSD1Q6JBY9 416 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 FAM196AQ6ZSG2 479 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 SLITRK6Q9H5Y7 841 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 NOP53Q9NZM5 478 aaKnown RBP8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 FBXO40Q9UH90 709 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 NUB1Q9Y5A7 615 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 PALLDQ8WX93 1383 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 CFAP73A6NFT4 308 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 ASAP2O43150 1006 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 ZBED1O96006 694 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 SRGAP2CP0DJJ0 459 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 CHRNA3P32297 505 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 DDIT3P35638 169 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 VPS41P49754 854 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 SCNN1DP51172 638 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 GPC5P78333 572 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 ERFEQ4G0M1 354 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 PYROXD1Q8WU10 500 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 CFAP36Q96G28 342 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 LRRC4Q9HBW1 653 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 PNMA3Q9UL41 463 aa8.98□□□□□ -0.97
SPTLC3-201ENST00000399002 ENC1O14682 589 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 SPAG7O75391 227 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 MDM2Q00987 491 aaPredicted RBP8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 GRM1Q13255 1194 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 TAF11Q15544 211 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 KCTD17Q8N5Z5 321 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 PUS3Q9BZE2 481 aaKnown RBP8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 IP6K2Q9UHH9 426 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 NRBP1Q9UHY1 535 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 UBE4BO95155 1302 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 XPAP23025 273 aaPredicted RBP8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 SESN3P58005 492 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 DHX34Q14147 1143 aaKnown RBP8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 RPAINQ86UA6 219 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 SCYL3Q8IZE3 742 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 ARHGAP18Q8N392 663 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 LRRC37BQ96QE4 947 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 MSTO1Q9BUK6 570 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 TRIM55Q9BYV6 548 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 PUS7LQ9H0K6 701 aaKnown RBP8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 LRFN2Q9ULH4 789 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 PLAAQ9Y263 795 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 GOLGA8MH3BSY2 632 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 KRT38O76015 456 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 MCF2P10911 925 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 ESRRAP11474 423 aaPredicted RBP8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 ZFXP17010 805 aaPredicted RBP8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 MAGEA9P43362 315 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 CDK8P49336 464 aa8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 BASP1P80723 227 aaKnown RBP8.97□□□□□ -0.97
SPTLC3-201ENST00000399002 CYP4A11Q02928 519 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms