RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 TMX1Q9H3N1 280 aa13.65□□□□□ -0.22
SYNE4-203ENST00000397428 AZI2Q9H6S1 392 aa13.65□□□□□ -0.22
SYNE4-203ENST00000397428 RIC8AQ9NPQ8 531 aa13.65□□□□□ -0.22
SYNE4-203ENST00000397428 TRPV2Q9Y5S1 764 aa13.65□□□□□ -0.22
SYNE4-203ENST00000397428 MRPL42Q9Y6G3 142 aaKnown RBP13.65□□□□□ -0.22
SYNE4-203ENST00000397428 C5orf42Q9H799 3197 aa13.65□□□□□ -0.22
SYNE4-203ENST00000397428 IGSF9BQ9UPX0 1349 aa13.64□□□□□ -0.23
SYNE4-203ENST00000397428 SMIM35A0A1B0GVV1 85 aa13.64□□□□□ -0.23
SYNE4-203ENST00000397428 LINC01565O15544 149 aa13.64□□□□□ -0.23
SYNE4-203ENST00000397428 EYA4O95677 639 aa13.64□□□□□ -0.23
SYNE4-203ENST00000397428 ITGB1P05556 798 aa13.64□□□□□ -0.23
SYNE4-203ENST00000397428 STAG3L1P0CL83 205 aa13.64□□□□□ -0.23
SYNE4-203ENST00000397428 SLC26A2P50443 739 aa13.64□□□□□ -0.23
SYNE4-203ENST00000397428 CSPP1Q1MSJ5 1256 aa13.64□□□□□ -0.23
SYNE4-203ENST00000397428 TYW1BQ6NUM6 668 aa13.64□□□□□ -0.23
SYNE4-203ENST00000397428 MTHFD1LQ6UB35 978 aa13.64□□□□□ -0.23
SYNE4-203ENST00000397428 HEATR3Q7Z4Q2 680 aa13.64□□□□□ -0.23
SYNE4-203ENST00000397428 TRAPPC12Q8WVT3 735 aa13.64□□□□□ -0.23
SYNE4-203ENST00000397428 MSLNLQ96KJ4 702 aa13.64□□□□□ -0.23
SYNE4-203ENST00000397428 ESYT1Q9BSJ8 1104 aa13.64□□□□□ -0.23
SYNE4-203ENST00000397428 KCNH6Q9H252 994 aa13.64□□□□□ -0.23
SYNE4-203ENST00000397428 IGFLR1Q9H665 355 aa13.64□□□□□ -0.23
SYNE4-203ENST00000397428 AGO4Q9HCK5 861 aaKnown RBP13.64□□□□□ -0.23
SYNE4-203ENST00000397428 CD207Q9UJ71 328 aa13.64□□□□□ -0.23
SYNE4-203ENST00000397428 TBX10O75333 385 aa13.63□□□□□ -0.23
SYNE4-203ENST00000397428 KLRC1P26715 233 aa13.63□□□□□ -0.23
SYNE4-203ENST00000397428 KRT76Q01546 638 aa13.63□□□□□ -0.23
SYNE4-203ENST00000397428 EXOSC10Q01780 885 aaKnown RBP13.63□□□□□ -0.23
SYNE4-203ENST00000397428 TMEM62Q0P6H9 643 aa13.63□□□□□ -0.23
SYNE4-203ENST00000397428 ITGB3BPQ13352 177 aaPredicted RBP13.63□□□□□ -0.23
SYNE4-203ENST00000397428 SMAD4Q13485 552 aaKnown RBP13.63□□□□□ -0.23
SYNE4-203ENST00000397428 CEP55Q53EZ4 464 aa13.63□□□□□ -0.23
SYNE4-203ENST00000397428 HERC4Q5GLZ8 1057 aaPredicted RBP13.63□□□□□ -0.23
SYNE4-203ENST00000397428 WWC2Q6AWC2 1192 aa13.63□□□□□ -0.23
SYNE4-203ENST00000397428 NIPA1Q7RTP0 329 aa13.63□□□□□ -0.23
SYNE4-203ENST00000397428 RAB11FIP4Q86YS3 637 aa13.63□□□□□ -0.23
SYNE4-203ENST00000397428 RNF135Q8IUD6 432 aa13.63□□□□□ -0.23
SYNE4-203ENST00000397428 EFHBQ8N7U6 833 aa13.63□□□□□ -0.23
SYNE4-203ENST00000397428 KLHL23Q8NBE8 558 aa13.63□□□□□ -0.23
SYNE4-203ENST00000397428 UIMC1Q96RL1 719 aa13.63□□□□□ -0.23
SYNE4-203ENST00000397428 SDF4Q9BRK5 362 aa13.63□□□□□ -0.23
SYNE4-203ENST00000397428 LRRC2Q9BYS8 371 aa13.63□□□□□ -0.23
SYNE4-203ENST00000397428 CLEC1BQ9P126 229 aa13.63□□□□□ -0.23
SYNE4-203ENST00000397428 V9GY48 417 aaPredicted RBP13.63□□□□□ -0.23
SYNE4-203ENST00000397428 M0QZ92 97 aa13.62□□□□□ -0.23
SYNE4-203ENST00000397428 SCG2P13521 617 aa13.62□□□□□ -0.23
SYNE4-203ENST00000397428 FAM189BP81408 668 aa13.62□□□□□ -0.23
SYNE4-203ENST00000397428 PAK2Q13177 524 aa13.62□□□□□ -0.23
SYNE4-203ENST00000397428 CLUL1Q15846 466 aa13.62□□□□□ -0.23
SYNE4-203ENST00000397428 ABHD15Q6UXT9 468 aa13.62□□□□□ -0.23
SYNE4-203ENST00000397428 SYNE3Q6ZMZ3 975 aa13.62□□□□□ -0.23
SYNE4-203ENST00000397428 ADGRD2Q7Z7M1 963 aa13.62□□□□□ -0.23
SYNE4-203ENST00000397428 KIAA0319LQ8IZA0 1049 aa13.62□□□□□ -0.23
SYNE4-203ENST00000397428 POP1Q99575 1024 aaKnown RBP13.62□□□□□ -0.23
SYNE4-203ENST00000397428 CDHR5Q9HBB8 845 aa13.62□□□□□ -0.23
SYNE4-203ENST00000397428 ERVK-5Q9HDB9 667 aa13.62□□□□□ -0.23
SYNE4-203ENST00000397428 TRPC6Q9Y210 931 aa13.62□□□□□ -0.23
SYNE4-203ENST00000397428 MYO7AQ13402 2215 aa13.62□□□□□ -0.23
SYNE4-203ENST00000397428 LOXHD1Q8IVV2 1947 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 SMCO2A6NFE2 343 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 STXBP3O00186 592 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 DHX15O43143 795 aaKnown RBP13.61□□□□□ -0.23
SYNE4-203ENST00000397428 HBP1O60381 514 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 CCNE2O96020 404 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 SREBF1P36956 1147 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 SARSP49591 514 aaKnown RBP13.61□□□□□ -0.23
SYNE4-203ENST00000397428 CLK2P49760 499 aaKnown RBP13.61□□□□□ -0.23
SYNE4-203ENST00000397428 COASYQ13057 564 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 TSGA10IPQ3SY00 556 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 PPP1R18Q6NYC8 613 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 APOA5Q6Q788 366 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 BMP8AQ7Z5Y6 402 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 ALYREFQ86V81 257 aaKnown RBP13.61□□□□□ -0.23
SYNE4-203ENST00000397428 POF1BQ8WVV4 589 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 CRYGNQ8WXF5 182 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 EDAQ92838 391 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 FBXL18Q96ME1 805 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 RGS18Q9NS28 235 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 FAM217BQ9NTX9 383 aaPredicted RBP13.61□□□□□ -0.23
SYNE4-203ENST00000397428 RBM28Q9NW13 759 aaKnown RBP13.61□□□□□ -0.23
SYNE4-203ENST00000397428 TMEM260Q9NX78 707 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 BRPF3Q9ULD4 1205 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 CNTNAP5Q8WYK1 1306 aa13.61□□□□□ -0.23
SYNE4-203ENST00000397428 ZBTB42B2RXF5 422 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 LOC730098B7Z3J9 87 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 C9IYK1 514 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 MGEA5O60502 916 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 ATP4AP20648 1035 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 GATMP50440 423 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 ADCY7P51828 1080 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 NAPAP54920 295 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 NFX1Q12986 1120 aaKnown RBP13.6□□□□□ -0.23
SYNE4-203ENST00000397428 TMEM266Q2M3C6 531 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 PAN2Q504Q3 1202 aaKnown RBP13.6□□□□□ -0.23
SYNE4-203ENST00000397428 ZNF484Q5JVG2 852 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 HFE2Q6ZVN8 426 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 DHX32Q7L7V1 743 aaKnown RBP13.6□□□□□ -0.23
SYNE4-203ENST00000397428 MICU3Q86XE3 530 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 ATP8B4Q8TF62 1192 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 PPP2R3CQ969Q6 453 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms