RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 NHEJ1Q9H9Q4 299 aaPredicted RBP16.65■□□□□ 0.26
MCF2L-205ENST00000397017 GPRC5DQ9NZD1 345 aa16.65■□□□□ 0.26
MCF2L-205ENST00000397017 ADAMTS7Q9UKP4 1686 aa16.65■□□□□ 0.26
MCF2L-205ENST00000397017 LRRC53A6NM62 1247 aa16.65■□□□□ 0.26
MCF2L-205ENST00000397017 ERLIN1O75477 346 aa16.65■□□□□ 0.26
MCF2L-205ENST00000397017 NDUFA10O95299 355 aa16.65■□□□□ 0.26
MCF2L-205ENST00000397017 C4orf32Q8N8J7 132 aa16.65■□□□□ 0.26
MCF2L-205ENST00000397017 KIAA0895Q8NCT3 520 aa16.65■□□□□ 0.26
MCF2L-205ENST00000397017 TJP1Q07157 1748 aa16.65■□□□□ 0.26
MCF2L-205ENST00000397017 AFPP02771 609 aaKnown RBP16.65■□□□□ 0.26
MCF2L-205ENST00000397017 PSMC2P35998 433 aaKnown RBP16.65■□□□□ 0.26
MCF2L-205ENST00000397017 USP37Q86T82 979 aa16.65■□□□□ 0.26
MCF2L-205ENST00000397017 EHBP1Q8NDI1 1231 aa16.65■□□□□ 0.26
MCF2L-205ENST00000397017 SYTL5Q8TDW5 730 aaPredicted RBP16.65■□□□□ 0.26
MCF2L-205ENST00000397017 TMEM143Q96AN5 459 aa16.65■□□□□ 0.26
MCF2L-205ENST00000397017 SEMA6BQ9H3T3 888 aa16.65■□□□□ 0.26
MCF2L-205ENST00000397017 EXOC7Q9UPT5 735 aa16.65■□□□□ 0.26
MCF2L-205ENST00000397017 SNED1Q8TER0 1413 aa16.65■□□□□ 0.26
MCF2L-205ENST00000397017 DKC1O60832 514 aaKnown RBP eCLIP16.64■□□□□ 0.26
MCF2L-205ENST00000397017 GNA14O95837 355 aa16.64■□□□□ 0.26
MCF2L-205ENST00000397017 GYPCP04921 128 aa16.64■□□□□ 0.26
MCF2L-205ENST00000397017 YWHABP31946 246 aaKnown RBP16.64■□□□□ 0.26
MCF2L-205ENST00000397017 STAT1P42224 750 aa16.64■□□□□ 0.26
MCF2L-205ENST00000397017 FKBP1AP62942 108 aaKnown RBP16.64■□□□□ 0.26
MCF2L-205ENST00000397017 CNTN2Q02246 1040 aa16.64■□□□□ 0.26
MCF2L-205ENST00000397017 PSMD2Q13200 908 aa16.64■□□□□ 0.26
MCF2L-205ENST00000397017 CLMNQ96JQ2 1002 aa16.64■□□□□ 0.26
MCF2L-205ENST00000397017 IKZF4Q9H2S9 585 aa16.64■□□□□ 0.26
MCF2L-205ENST00000397017 EYA4O95677 639 aa16.64■□□□□ 0.25
MCF2L-205ENST00000397017 SIAH1Q8IUQ4 282 aa16.64■□□□□ 0.25
MCF2L-205ENST00000397017 MMTAG2Q9BU76 263 aaKnown RBP16.64■□□□□ 0.25
MCF2L-205ENST00000397017 ROBO3Q96MS0 1386 aa16.64■□□□□ 0.25
MCF2L-205ENST00000397017 PNMA6AP0CW24 399 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-205ENST00000397017 OSBPP22059 807 aa16.64■□□□□ 0.25
MCF2L-205ENST00000397017 KCNA1Q09470 495 aa16.64■□□□□ 0.25
MCF2L-205ENST00000397017 RAD9BQ6WBX8 426 aa16.64■□□□□ 0.25
MCF2L-205ENST00000397017 ELMO3Q96BJ8 720 aa16.64■□□□□ 0.25
MCF2L-205ENST00000397017 NAA15Q9BXJ9 866 aaKnown RBP16.64■□□□□ 0.25
MCF2L-205ENST00000397017 MYH3P11055 1940 aa16.64■□□□□ 0.25
MCF2L-205ENST00000397017 DENND3A2RUS2 1198 aa16.64■□□□□ 0.25
MCF2L-205ENST00000397017 ZMYND10O75800 440 aa16.64■□□□□ 0.25
MCF2L-205ENST00000397017 PTPRAP18433 802 aa16.64■□□□□ 0.25
MCF2L-205ENST00000397017 EPHA7Q15375 998 aa16.64■□□□□ 0.25
MCF2L-205ENST00000397017 CCDC51Q96ER9 411 aa16.64■□□□□ 0.25
MCF2L-205ENST00000397017 MTMR9Q96QG7 549 aa16.64■□□□□ 0.25
MCF2L-205ENST00000397017 WDR24Q96S15 920 aa16.64■□□□□ 0.25
MCF2L-205ENST00000397017 PSAPP07602 524 aa16.63■□□□□ 0.25
MCF2L-205ENST00000397017 SNHG28P0DPA3 235 aa16.63■□□□□ 0.25
MCF2L-205ENST00000397017 FAM47CQ5HY64 1035 aa16.63■□□□□ 0.25
MCF2L-205ENST00000397017 GOLGA1Q92805 767 aa16.63■□□□□ 0.25
MCF2L-205ENST00000397017 MAP7D2Q96T17 732 aa16.63■□□□□ 0.25
MCF2L-205ENST00000397017 TBC1D22BQ9NU19 505 aa16.63■□□□□ 0.25
MCF2L-205ENST00000397017 GAP43P17677 238 aa16.63■□□□□ 0.25
MCF2L-205ENST00000397017 ZBED6P86452 979 aa16.63■□□□□ 0.25
MCF2L-205ENST00000397017 TKFCQ3LXA3 575 aa16.63■□□□□ 0.25
MCF2L-205ENST00000397017 CDR2LQ86X02 465 aaPredicted RBP16.63■□□□□ 0.25
MCF2L-205ENST00000397017 RIPK3Q9Y572 518 aa16.63■□□□□ 0.25
MCF2L-205ENST00000397017 PCDHA10Q9Y5I2 948 aa16.63■□□□□ 0.25
MCF2L-205ENST00000397017 SRGAP2O75044 1071 aa16.63■□□□□ 0.25
MCF2L-205ENST00000397017 POTEJP0CG39 1038 aa16.63■□□□□ 0.25
MCF2L-205ENST00000397017 EPHX2P34913 555 aa16.63■□□□□ 0.25
MCF2L-205ENST00000397017 CASP4P49662 377 aa16.63■□□□□ 0.25
MCF2L-205ENST00000397017 MAP2K1Q02750 393 aaPredicted RBP16.63■□□□□ 0.25
MCF2L-205ENST00000397017 WDR44Q5JSH3 913 aa16.63■□□□□ 0.25
MCF2L-205ENST00000397017 MIS18BP1Q6P0N0 1132 aa16.63■□□□□ 0.25
MCF2L-205ENST00000397017 IFT81Q8WYA0 676 aa16.63■□□□□ 0.25
MCF2L-205ENST00000397017 VGLL4Q14135 290 aa16.62■□□□□ 0.25
MCF2L-205ENST00000397017 RINT1Q6NUQ1 792 aa16.62■□□□□ 0.25
MCF2L-205ENST00000397017 DNAAF5Q86Y56 855 aa16.62■□□□□ 0.25
MCF2L-205ENST00000397017 ERO1AQ96HE7 468 aa16.62■□□□□ 0.25
MCF2L-205ENST00000397017 APOL6Q9BWW8 343 aa16.62■□□□□ 0.25
MCF2L-205ENST00000397017 SYNCQ9H7C4 482 aa16.62■□□□□ 0.25
MCF2L-205ENST00000397017 CGNQ9P2M7 1197 aaKnown RBP16.62■□□□□ 0.25
MCF2L-205ENST00000397017 CICQ96RK0 1608 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-205ENST00000397017 IRS2Q9Y4H2 1338 aa16.62■□□□□ 0.25
MCF2L-205ENST00000397017 VWA5AO00534 786 aa16.62■□□□□ 0.25
MCF2L-205ENST00000397017 MYL7Q01449 175 aa16.62■□□□□ 0.25
MCF2L-205ENST00000397017 GFPT1Q06210 699 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-205ENST00000397017 PPP1R13LQ8WUF5 828 aa16.62■□□□□ 0.25
MCF2L-205ENST00000397017 FAM49AQ9H0Q0 323 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-205ENST00000397017 JPH1Q9HDC5 661 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-205ENST00000397017 ADARB2Q9NS39 739 aaKnown RBP16.62■□□□□ 0.25
MCF2L-205ENST00000397017 CTTNBP2NLQ9P2B4 639 aa16.62■□□□□ 0.25
MCF2L-205ENST00000397017 MYO5AQ9Y4I1 1855 aaKnown RBP16.62■□□□□ 0.25
MCF2L-205ENST00000397017 IRF6O14896 467 aa16.62■□□□□ 0.25
MCF2L-205ENST00000397017 MOCS3O95396 460 aa16.62■□□□□ 0.25
MCF2L-205ENST00000397017 PLEKP08567 350 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-205ENST00000397017 CCDC172P0C7W6 258 aa16.62■□□□□ 0.25
MCF2L-205ENST00000397017 CD19P15391 556 aa16.62■□□□□ 0.25
MCF2L-205ENST00000397017 ORC2Q13416 577 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-205ENST00000397017 TTI2Q6NXR4 508 aa16.62■□□□□ 0.25
MCF2L-205ENST00000397017 MTERF4Q7Z6M4 381 aaKnown RBP16.62■□□□□ 0.25
MCF2L-205ENST00000397017 SYT17Q9BSW7 474 aa16.62■□□□□ 0.25
MCF2L-205ENST00000397017 METTL14Q9HCE5 456 aaKnown RBP16.62■□□□□ 0.25
MCF2L-205ENST00000397017 ABT1Q9ULW3 272 aaKnown RBP16.62■□□□□ 0.25
MCF2L-205ENST00000397017 UBR2Q8IWV8 1755 aa16.61■□□□□ 0.25
MCF2L-205ENST00000397017 IGKV6D-41A0A0C4DH26 115 aa16.61■□□□□ 0.25
MCF2L-205ENST00000397017 GGPS1O95749 300 aa16.61■□□□□ 0.25
MCF2L-205ENST00000397017 IQCEQ6IPM2 695 aa16.61■□□□□ 0.25
MCF2L-205ENST00000397017 HAUS6Q7Z4H7 955 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms