RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 MAPK7Q13164 816 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 IFNLR1Q8IU57 520 aaPredicted RBP11.92□□□□□ -0.5
NUP98-205ENST00000397007 KCNG4Q8TDN1 519 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 CEP131Q9UPN4 1083 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 PSMC5P62195 406 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 FAAP100Q0VG06 881 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 MIS18BP1Q6P0N0 1132 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 CRIPAKQ8N1N5 446 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 SPRYD3Q8NCJ5 442 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 GOLPH3LQ9H4A5 285 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 XPNPEP1Q9NQW7 623 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 ANKEF1Q9NU02 776 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 NLRC5Q86WI3 1866 aa11.92□□□□□ -0.5
NUP98-205ENST00000397007 H3BRB1 525 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 SPTLC2O15270 562 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 OATP04181 439 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 TECP42680 631 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 PSMC6P62333 389 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 ARSHQ5FYA8 562 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 GDF6Q6KF10 455 aaPredicted RBP11.91□□□□□ -0.5
NUP98-205ENST00000397007 SPATA20Q8TB22 786 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 ZNF396Q96N95 335 aaPredicted RBP11.91□□□□□ -0.5
NUP98-205ENST00000397007 TUT1Q9H6E5 874 aaKnown RBP11.91□□□□□ -0.5
NUP98-205ENST00000397007 C11orf49Q9H6J7 331 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 ERAP1Q9NZ08 941 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 A0A0U1RQG5 324 aaPredicted RBP11.91□□□□□ -0.5
NUP98-205ENST00000397007 KIAA0355O15063 1070 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 ACTN4O43707 911 aaKnown RBP11.91□□□□□ -0.5
NUP98-205ENST00000397007 BAG4O95429 457 aaKnown RBP11.91□□□□□ -0.5
NUP98-205ENST00000397007 SMIM10L2AP0DMW4 78 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 SMIM10L2BP0DMW5 78 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 ZNF131P52739 623 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 DYDC2Q96IM9 177 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 CLIC6Q96NY7 704 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 LXNQ9BS40 222 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 ZNF302Q9NR11 478 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 NRCAMQ92823 1304 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 MAFO75444 373 aaPredicted RBP11.91□□□□□ -0.5
NUP98-205ENST00000397007 QARSP47897 775 aaKnown RBP11.91□□□□□ -0.5
NUP98-205ENST00000397007 RARRES1P49788 294 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 NBPF20Q3BBV1 942 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 DAW1Q8N136 415 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 KRI1Q8N9T8 703 aaKnown RBP11.91□□□□□ -0.5
NUP98-205ENST00000397007 LMBR1Q8WVP7 490 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 KBTBD4Q9NVX7 518 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 RGL1Q9NZL6 768 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 PCDHA2Q9Y5H9 948 aa11.91□□□□□ -0.5
NUP98-205ENST00000397007 B4GALT4O60513 344 aa11.9□□□□□ -0.5
NUP98-205ENST00000397007 CAND2O75155 1236 aa11.9□□□□□ -0.5
NUP98-205ENST00000397007 CMA1P23946 247 aa11.9□□□□□ -0.5
NUP98-205ENST00000397007 TXKP42681 527 aa11.9□□□□□ -0.5
NUP98-205ENST00000397007 CXCL17Q6UXB2 119 aa11.9□□□□□ -0.5
NUP98-205ENST00000397007 C1orf186Q6ZWK4 172 aa11.9□□□□□ -0.5
NUP98-205ENST00000397007 KATNAL1Q9BW62 490 aa11.9□□□□□ -0.5
NUP98-205ENST00000397007 CFAP45Q9UL16 551 aa11.9□□□□□ -0.5
NUP98-205ENST00000397007 ZBTB39O15060 712 aa11.9□□□□□ -0.5
NUP98-205ENST00000397007 STAT5BP51692 787 aa11.9□□□□□ -0.5
NUP98-205ENST00000397007 PRKCEQ02156 737 aa11.9□□□□□ -0.5
NUP98-205ENST00000397007 ITGA7Q13683 1181 aa11.9□□□□□ -0.5
NUP98-205ENST00000397007 DTHD1Q6ZMT9 781 aa11.9□□□□□ -0.5
NUP98-205ENST00000397007 EPSTI1Q96J88 318 aa11.9□□□□□ -0.5
NUP98-205ENST00000397007 AP5M1Q9H0R1 490 aa11.9□□□□□ -0.5
NUP98-205ENST00000397007 GPR32O75388 356 aa11.9□□□□□ -0.51
NUP98-205ENST00000397007 C6orf222P0C671 652 aaPredicted RBP11.9□□□□□ -0.51
NUP98-205ENST00000397007 ARL2P36404 184 aa11.9□□□□□ -0.51
NUP98-205ENST00000397007 ZNF76P36508 570 aa11.9□□□□□ -0.51
NUP98-205ENST00000397007 ZNF484Q5JVG2 852 aa11.9□□□□□ -0.51
NUP98-205ENST00000397007 GNASQ5JWF2 1037 aa11.9□□□□□ -0.51
NUP98-205ENST00000397007 MCTP1Q6DN14 999 aa11.9□□□□□ -0.51
NUP98-205ENST00000397007 SYT2Q8N9I0 419 aaPredicted RBP11.9□□□□□ -0.51
NUP98-205ENST00000397007 TMEM174Q8WUU8 243 aa11.9□□□□□ -0.51
NUP98-205ENST00000397007 SYMPKQ92797 1274 aaKnown RBP11.9□□□□□ -0.51
NUP98-205ENST00000397007 NFKBIZQ9BYH8 718 aa11.9□□□□□ -0.51
NUP98-205ENST00000397007 MLXIPQ9HAP2 919 aa11.9□□□□□ -0.51
NUP98-205ENST00000397007 GABBR1Q9UBS5 961 aa11.9□□□□□ -0.51
NUP98-205ENST00000397007 CHD9Q3L8U1 2897 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 ITGB8P26012 769 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 RTP1P59025 263 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 XKR3Q5GH77 459 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 SWSAP1Q6NVH7 229 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 FMR1NBQ8N0W7 255 aaPredicted RBP11.89□□□□□ -0.51
NUP98-205ENST00000397007 SCAND2PQ9GZW5 306 aaPredicted RBP11.89□□□□□ -0.51
NUP98-205ENST00000397007 ADAMTS10Q9H324 1103 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 KIAA0753Q2KHM9 967 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 MTHFD1LQ6UB35 978 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 MIER3Q7Z3K6 550 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 DNAJC19Q96DA6 116 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 LMBRD1Q9NUN5 540 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 HDAC6Q9UBN7 1215 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 COL4A4P53420 1690 aaPredicted RBP11.89□□□□□ -0.51
NUP98-205ENST00000397007 TSC2P49815 1807 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 POTEB3A0JP26 581 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 HBP1O60381 514 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 CXCL10P02778 98 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 POU5F1BQ06416 359 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 PTK7Q13308 1070 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 CDCA2Q69YH5 1023 aaPredicted RBP11.89□□□□□ -0.51
NUP98-205ENST00000397007 POTEBQ6S5H4 581 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 RUFY4Q6ZNE9 571 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 FAM43BQ6ZT52 329 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms