RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 KCNH2Q12809 1159 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 ADAM9Q13443 819 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 DPY19L2P1Q6NXN4 242 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 CD302Q8IX05 232 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 USP38Q8NB14 1042 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 SAMM50Q9Y512 469 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 GREB1LQ9C091 1923 aaPredicted RBP20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 A6NNZ2 444 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 USP17L10C9JJH3 530 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 MYBP10242 640 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 TUBB8Q3ZCM7 444 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 KDM7AQ6ZMT4 941 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 MICALL1Q8N3F8 863 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 PSTPIP2Q9H939 334 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 TMEM59LQ9UK28 342 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 PSME4Q14997 1843 aa20.11■□□□□ 0.81
PCDHA1-202ENST00000394633 FRMD3A2A2Y4 597 aa20.1■□□□□ 0.81
PCDHA1-202ENST00000394633 ACTN1P12814 892 aa20.1■□□□□ 0.81
PCDHA1-202ENST00000394633 ARSHQ5FYA8 562 aa20.1■□□□□ 0.81
PCDHA1-202ENST00000394633 LARGE2Q8N3Y3 721 aa20.1■□□□□ 0.81
PCDHA1-202ENST00000394633 RNPC3Q96LT9 517 aaKnown RBP20.1■□□□□ 0.81
PCDHA1-202ENST00000394633 BTNL10A8MVZ5 291 aa20.1■□□□□ 0.81
PCDHA1-202ENST00000394633 EPS15P42566 896 aa20.1■□□□□ 0.81
PCDHA1-202ENST00000394633 EDRF1Q3B7T1 1238 aa20.1■□□□□ 0.81
PCDHA1-202ENST00000394633 IRF2BP2Q7Z5L9 587 aa20.1■□□□□ 0.81
PCDHA1-202ENST00000394633 WHAMMQ8TF30 809 aa20.1■□□□□ 0.81
PCDHA1-202ENST00000394633 POLD4Q9HCU8 107 aa20.1■□□□□ 0.81
PCDHA1-202ENST00000394633 BCS1LQ9Y276 419 aa20.1■□□□□ 0.81
PCDHA1-202ENST00000394633 CD2APQ9Y5K6 639 aa20.1■□□□□ 0.81
PCDHA1-202ENST00000394633 ZBTB5O15062 677 aa20.09■□□□□ 0.81
PCDHA1-202ENST00000394633 CETN3O15182 167 aa20.09■□□□□ 0.81
PCDHA1-202ENST00000394633 MED24O75448 989 aa20.09■□□□□ 0.81
PCDHA1-202ENST00000394633 LIG3P49916 1009 aa20.09■□□□□ 0.81
PCDHA1-202ENST00000394633 CASP5P51878 434 aa20.09■□□□□ 0.81
PCDHA1-202ENST00000394633 TNNC1P63316 161 aa20.09■□□□□ 0.81
PCDHA1-202ENST00000394633 PTK2Q05397 1052 aa20.09■□□□□ 0.81
PCDHA1-202ENST00000394633 ZNF571Q7Z3V5 609 aaPredicted RBP20.09■□□□□ 0.81
PCDHA1-202ENST00000394633 KLHL7Q8IXQ5 586 aa20.09■□□□□ 0.81
PCDHA1-202ENST00000394633 DDX4Q9NQI0 724 aaKnown RBP20.09■□□□□ 0.81
PCDHA1-202ENST00000394633 HDAC9Q9UKV0 1011 aa20.09■□□□□ 0.81
PCDHA1-202ENST00000394633 CES2O00748 559 aa20.08■□□□□ 0.81
PCDHA1-202ENST00000394633 RAD17O75943 681 aa20.08■□□□□ 0.81
PCDHA1-202ENST00000394633 SLC9A1P19634 815 aa20.08■□□□□ 0.81
PCDHA1-202ENST00000394633 STAT3P40763 770 aa20.08■□□□□ 0.81
PCDHA1-202ENST00000394633 SLC12A3P55017 1021 aa20.08■□□□□ 0.81
PCDHA1-202ENST00000394633 RPS6KA1Q15418 735 aa20.08■□□□□ 0.81
PCDHA1-202ENST00000394633 EMC10Q5UCC4 262 aa20.08■□□□□ 0.81
PCDHA1-202ENST00000394633 APOBEC3HQ6NTF7 200 aaKnown RBP20.08■□□□□ 0.81
PCDHA1-202ENST00000394633 PPP4R3CPQ6ZMV5 832 aa20.08■□□□□ 0.81
PCDHA1-202ENST00000394633 KCTD1Q719H9 257 aa20.08■□□□□ 0.81
PCDHA1-202ENST00000394633 TAF4BQ92750 862 aa20.08■□□□□ 0.81
PCDHA1-202ENST00000394633 KCNMB3Q9NPA1 279 aa20.08■□□□□ 0.81
PCDHA1-202ENST00000394633 NFKBIEO00221 500 aa20.08■□□□□ 0.8
PCDHA1-202ENST00000394633 NDUFAB1O14561 156 aa20.08■□□□□ 0.8
PCDHA1-202ENST00000394633 KCNK3O14649 394 aa20.08■□□□□ 0.8
PCDHA1-202ENST00000394633 NR2F2P24468 414 aa20.08■□□□□ 0.8
PCDHA1-202ENST00000394633 ILDR2Q71H61 639 aa20.08■□□□□ 0.8
PCDHA1-202ENST00000394633 GOLPH3Q9H4A6 298 aa20.08■□□□□ 0.8
PCDHA1-202ENST00000394633 ZHX3Q9H4I2 956 aa20.08■□□□□ 0.8
PCDHA1-202ENST00000394633 USP17L15C9J2P7 530 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 USP17L13C9JLJ4 530 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 USP17L11C9JVI0 530 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 USP17L18D6R9N7 530 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 USP17L22D6RA61 530 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 USP17L17D6RBQ6 530 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 USP17L19D6RCP7 530 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 USP17L20D6RJB6 530 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 KIF4AO95239 1232 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 KRT18P05783 430 aaKnown RBP20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 HSPA9P38646 679 aaKnown RBP20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 CRKP46108 304 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 USP11P51784 963 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 ERVK-9P63128 1117 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 USP17L24Q0WX57 530 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 GRIPAP1Q4V328 841 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 USP17L6PQ6QN14 398 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 DNAAF5Q86Y56 855 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 TEKT1Q969V4 418 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 NAP1L4Q99733 375 aaKnown RBP20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 DHX36Q9H2U1 1008 aaKnown RBP20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 SWAP70Q9UH65 585 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 PITPNM2Q9BZ72 1349 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 POTEFA5A3E0 1075 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 ERLIN2O94905 339 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 POTEIP0CG38 1075 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 NR1D1P20393 614 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 LSP1P33241 339 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 SHMT1P34896 483 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 GUCY1A3Q02108 690 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 C10orf76Q5T2E6 689 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 POTEGQ6S5H5 508 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 POTEEQ6S8J3 1075 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 SCFD2Q8WU76 684 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 TAF1DQ9H5J8 278 aaPredicted RBP20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 PLCB1Q9NQ66 1216 aa20.07■□□□□ 0.8
PCDHA1-202ENST00000394633 ZEB2O60315 1214 aa20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 UCHL3P15374 230 aa20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 ECHS1P30084 290 aa20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 GPATCH4Q5T3I0 446 aaKnown RBP20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 ICE2Q659A1 982 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms