RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 VAV2P52735 878 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 ANKRD20A8PQ5CZ79 823 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 SLFN13Q68D06 897 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 RRAGAQ7L523 313 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 SPATA31A6Q5VVP1 1343 aa10.9□□□□□ -0.66
PSEN1-204ENST00000394164 CLRN2A0PK11 232 aa10.9□□□□□ -0.67
PSEN1-204ENST00000394164 BICDL2A1A5D9 508 aa10.9□□□□□ -0.67
PSEN1-204ENST00000394164 POTEFA5A3E0 1075 aa10.9□□□□□ -0.67
PSEN1-204ENST00000394164 ZBTB5O15062 677 aa10.9□□□□□ -0.67
PSEN1-204ENST00000394164 HEXIM1O94992 359 aaKnown RBP10.9□□□□□ -0.67
PSEN1-204ENST00000394164 POTEIP0CG38 1075 aa10.9□□□□□ -0.67
PSEN1-204ENST00000394164 IRX1P78414 480 aaPredicted RBP10.9□□□□□ -0.67
PSEN1-204ENST00000394164 JAG1P78504 1218 aa10.9□□□□□ -0.67
PSEN1-204ENST00000394164 CDC37Q16543 378 aaPredicted RBP10.9□□□□□ -0.67
PSEN1-204ENST00000394164 POTEGQ6S5H5 508 aa10.9□□□□□ -0.67
PSEN1-204ENST00000394164 POTEEQ6S8J3 1075 aa10.9□□□□□ -0.67
PSEN1-204ENST00000394164 DNAAF5Q86Y56 855 aa10.9□□□□□ -0.67
PSEN1-204ENST00000394164 ARMC2Q8NEN0 867 aa10.9□□□□□ -0.67
PSEN1-204ENST00000394164 CYP2W1Q8TAV3 490 aa10.9□□□□□ -0.67
PSEN1-204ENST00000394164 RAD54LQ92698 747 aa10.9□□□□□ -0.67
PSEN1-204ENST00000394164 RSRC1Q96IZ7 334 aaKnown RBP10.9□□□□□ -0.67
PSEN1-204ENST00000394164 OSBPL9Q96SU4 736 aa10.9□□□□□ -0.67
PSEN1-204ENST00000394164 YIPF3Q9GZM5 350 aa10.9□□□□□ -0.67
PSEN1-204ENST00000394164 CAPN11Q9UMQ6 739 aa10.9□□□□□ -0.67
PSEN1-204ENST00000394164 PLAAQ9Y263 795 aa10.9□□□□□ -0.67
PSEN1-204ENST00000394164 PCNTO95613 3336 aa10.9□□□□□ -0.67
PSEN1-204ENST00000394164 ADAMTSL1Q8N6G6 1762 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 EPB41P11171 864 aaKnown RBP10.89□□□□□ -0.67
PSEN1-204ENST00000394164 CYLC1P35663 651 aaPredicted RBP10.89□□□□□ -0.67
PSEN1-204ENST00000394164 HERC4Q5GLZ8 1057 aaPredicted RBP10.89□□□□□ -0.67
PSEN1-204ENST00000394164 AP1ARQ63HQ0 302 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 TLDC1Q6P9B6 456 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 EMBQ6PCB8 327 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 TMC4Q7Z404 712 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 LMBR1Q8WVP7 490 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 CCDC42Q96M95 316 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 P2RX7Q99572 595 aaKnown RBP10.89□□□□□ -0.67
PSEN1-204ENST00000394164 RIC8AQ9NPQ8 531 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 CDK5RAP2Q96SN8 1893 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 MAST2Q6P0Q8 1798 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 TCP10L2B9ZVM9 353 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 PSMC6P62333 389 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 PABPC4Q13310 644 aaKnown RBP eCLIP10.89□□□□□ -0.67
PSEN1-204ENST00000394164 HLTFQ14527 1009 aaKnown RBP eCLIP10.89□□□□□ -0.67
PSEN1-204ENST00000394164 MAEAQ7L5Y9 396 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 SH3BP5LQ7L8J4 393 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 CCDC84Q86UT8 332 aaPredicted RBP10.89□□□□□ -0.67
PSEN1-204ENST00000394164 MMGT1Q8N4V1 131 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 CEP120Q8N960 986 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 EHBP1Q8NDI1 1231 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 ATP6V1G3Q96LB4 118 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 RAB34Q9BZG1 259 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 NDST4Q9H3R1 872 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 NOD2Q9HC29 1040 aa10.89□□□□□ -0.67
PSEN1-204ENST00000394164 SPATS2LQ9NUQ6 558 aaKnown RBP10.89□□□□□ -0.67
PSEN1-204ENST00000394164 SFI1A8K8P3 1242 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 ZNF263O14978 683 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 CHMP2AO43633 222 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 KIF4AO95239 1232 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 GH2P01242 217 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 NPR1P16066 1061 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 ICA1Q05084 483 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 TRIM14Q14142 442 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 YTHDF3Q7Z739 585 aaKnown RBP10.88□□□□□ -0.67
PSEN1-204ENST00000394164 HVCN1Q96D96 273 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 SEC16BQ96JE7 1060 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 FAM167BQ9BTA0 163 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 IKZF4Q9H2S9 585 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 PANK4Q9NVE7 773 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 GGT7Q9UJ14 662 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 NHSQ6T4R5 1651 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 ATXN2Q99700 1313 aaKnown RBP10.88□□□□□ -0.67
PSEN1-204ENST00000394164 MYH10P35580 1976 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 ECE2O60344 883 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 PAFAH1B1P43034 410 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 SEMA3FQ13275 785 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 SPA17Q15506 151 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 TDRD12Q587J7 1177 aaKnown RBP10.88□□□□□ -0.67
PSEN1-204ENST00000394164 SLC27A3Q5K4L6 730 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 THEMIS2Q5TEJ8 643 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 TBC1D1Q86TI0 1168 aaPredicted RBP10.88□□□□□ -0.67
PSEN1-204ENST00000394164 GPBP1Q86WP2 473 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 KLHL7Q8IXQ5 586 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 SPDYE1Q8NFV5 336 aaPredicted RBP10.88□□□□□ -0.67
PSEN1-204ENST00000394164 PIK3R5Q8WYR1 880 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 KRT12Q99456 494 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 DNAJC7Q99615 494 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 ATP6V0A4Q9HBG4 840 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 FAM198AQ9UFP1 575 aa10.88□□□□□ -0.67
PSEN1-204ENST00000394164 PACSIN2Q9UNF0 486 aaPredicted RBP10.88□□□□□ -0.67
PSEN1-204ENST00000394164 GMNCA6NCL1 334 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 GOLGA6L10A6NI86 522 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 LRRC53A6NM62 1247 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 TMCO5BA8MYB1 307 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 AKR1B10O60218 316 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 TACC1O75410 805 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 ATP6V1G2O95670 118 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 COASYQ13057 564 aa10.87□□□□□ -0.67
PSEN1-204ENST00000394164 ZKSCAN8Q15776 578 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-204ENST00000394164 C11orf91Q3C1V1 193 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms