RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 QPCTQ16769 361 aa12.83□□□□□ -0.35
R3HDM2-203ENST00000393811 HGSNATQ68CP4 663 aa12.83□□□□□ -0.35
R3HDM2-203ENST00000393811 OTUD6AQ7L8S5 288 aa12.83□□□□□ -0.35
R3HDM2-203ENST00000393811 CLEC10AQ8IUN9 316 aa12.83□□□□□ -0.35
R3HDM2-203ENST00000393811 ZNF384Q8TF68 577 aa12.83□□□□□ -0.35
R3HDM2-203ENST00000393811 SPZ1Q9BXG8 430 aa12.83□□□□□ -0.35
R3HDM2-203ENST00000393811 CNOT10Q9H9A5 744 aaKnown RBP12.83□□□□□ -0.35
R3HDM2-203ENST00000393811 LEMD3Q9Y2U8 911 aa12.83□□□□□ -0.35
R3HDM2-203ENST00000393811 SIPA1L3O60292 1781 aaPredicted RBP12.83□□□□□ -0.35
R3HDM2-203ENST00000393811 RASA1P20936 1047 aa12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 ADCY1Q08828 1119 aa12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 ZKSCAN8Q15776 578 aaPredicted RBP12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 CCDC38Q502W7 563 aa12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 PRR16Q569H4 304 aa12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 C10orf76Q5T2E6 689 aa12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 FBXO33Q7Z6M2 555 aa12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 TXNRD3Q86VQ6 643 aa12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 KSR1Q8IVT5 923 aa12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 MICAL1Q8TDZ2 1067 aa12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 THOC1Q96FV9 657 aaKnown RBP12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 STMN4Q9H169 189 aaPredicted RBP12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 AZI2Q9H6S1 392 aa12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 MLXIPLQ9NP71 852 aa12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 CHN1P15882 459 aa12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 SCP2P22307 547 aa12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 STAT3P40763 770 aa12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 CALCOCO2Q13137 446 aa12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 DPP8Q6V1X1 898 aaPredicted RBP12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 ZNF571Q7Z3V5 609 aaPredicted RBP12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 XPO6Q96QU8 1125 aaKnown RBP12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 NAGPAQ9UK23 515 aa12.83□□□□□ -0.36
R3HDM2-203ENST00000393811 AKAP11Q9UKA4 1901 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 POTEFA5A3E0 1075 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 SFI1A8K8P3 1242 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 LRRN2O75325 713 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 POTEIP0CG38 1075 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 GJB7Q6PEY0 223 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 POTEGQ6S5H5 508 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 POTEEQ6S8J3 1075 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 GLYCTKQ8IVS8 523 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 TRIM37O94972 964 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 FLT3P36888 993 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 PEX19P40855 299 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 CYP2J2P51589 502 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 KCTD1Q719H9 257 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 HS2ST1Q7LGA3 356 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 FUKQ8N0W3 1084 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 MREGQ8N565 214 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 MARCH10Q8NA82 808 aaPredicted RBP12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 TPX2Q9ULW0 747 aaKnown RBP12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 PCDHGC5Q9Y5F6 944 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 MYH13Q9UKX3 1938 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 OPLAHO14841 1288 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 CHMP2AO43633 222 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 SPOPO43791 374 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 SSR1P43307 286 aaKnown RBP12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 EIF3BP55884 814 aaKnown RBP12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 LRRC14Q15048 493 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 ANKRD20A8PQ5CZ79 823 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 SEL1L2Q5TEA6 688 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 YTHDF3Q7Z739 585 aaKnown RBP12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 CD302Q8IX05 232 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 SYN2Q92777 582 aaPredicted RBP12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 GLG1Q92896 1179 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 NYXQ9GZU5 481 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 KCPQ6ZWJ8 1503 aa12.82□□□□□ -0.36
R3HDM2-203ENST00000393811 USP17L15C9J2P7 530 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 USP17L13C9JLJ4 530 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 USP17L11C9JVI0 530 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 USP17L18D6R9N7 530 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 USP17L22D6RA61 530 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 USP17L17D6RBQ6 530 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 USP17L19D6RCP7 530 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 USP17L20D6RJB6 530 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 TRAPPC3O43617 180 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 CAND2O75155 1236 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 FGRP09769 529 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 USP17L24Q0WX57 530 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 MKRN4PQ13434 485 aaPredicted RBP12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 INTS5Q6P9B9 1019 aaKnown RBP12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 USP17L6PQ6QN14 398 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 ZNF572Q7Z3I7 529 aaPredicted RBP12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 SFR1Q86XK3 245 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 MYCT1Q8N699 235 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 SLITRK6Q9H5Y7 841 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 TMOD4Q9NZQ9 345 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 ABCB11O95342 1321 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 DCDC2CA8MYV0 355 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 LCA5LO95447 670 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 PMS2P54278 862 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 GALCP54803 685 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 PDIA5Q14554 519 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 AGBL2Q5U5Z8 902 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 TAOK1Q7L7X3 1001 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 TPCN2Q8NHX9 752 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 FERP16591 822 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 PLCG2P16885 1265 aa12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 CALRP27797 417 aaKnown RBP12.81□□□□□ -0.36
R3HDM2-203ENST00000393811 FNTAP49354 379 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms