RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 ARHGAP10A1A4S6 786 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 EIF4E1BA6NMX2 242 aaKnown RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 EFCAB8A8MWE9 144 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 DCDC2CA8MYV0 355 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 ERVV-1B6SEH8 477 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 USP17L10C9JJH3 530 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 CHUKO15111 745 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 CLDN3O15551 220 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 RNASEH1O60930 286 aaKnown RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 CAND2O75155 1236 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 BRAFP15056 766 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 SERPINB6P35237 376 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 MUM1Q2TAK8 710 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 SNX30Q5VWJ9 437 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 CHMP1BQ7LBR1 199 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 MFN1Q8IWA4 741 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 CCDC24Q8N4L8 307 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 AFG1LQ8WV93 481 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 SCFD1Q8WVM8 642 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 DHTKD1Q96HY7 919 aaPredicted RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 C6orf203Q9P0P8 240 aaPredicted RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 FEM1BQ9UK73 627 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 FAF1Q9UNN5 650 aaPredicted RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 ASXL2Q76L83 1435 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 GRIN2AQ12879 1464 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 KIAA0391O15091 583 aaKnown RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 SUN1O94901 812 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 PDE8BO95263 885 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 KRT1P04264 644 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 STAT3P40763 770 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 NPY2RP49146 381 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 VPS41P49754 854 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 ANXA11P50995 505 aaKnown RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 BLVRAP53004 296 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 CTDSPL2Q05D32 466 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 PDE1CQ14123 709 aaPredicted RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 ZNF235Q14590 738 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 STILQ15468 1287 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 SLC27A3Q5K4L6 730 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 IER5Q5VY09 327 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 ARRDC4Q8NCT1 418 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 MAGOHBQ96A72 148 aaKnown RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 GLT1D1Q96MS3 346 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 SPON2Q9BUD6 331 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 NUP85Q9BW27 656 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 RNF26Q9BY78 433 aaPredicted RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 SP110Q9HB58 689 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 MRGBPQ9NV56 204 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 ASNSD1Q9NWL6 643 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 KIAA1024Q9UPX6 916 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 FLT1P17948 1338 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 DNMBPQ6XZF7 1577 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 IQANK1A0A1B0GTG1 560 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 MAP3K13O43283 966 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 DNAJC6O75061 913 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 AFPP02771 609 aaKnown RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 ZFXP17010 805 aaPredicted RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 SMARCA1P28370 1054 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 CRKLP46109 303 aaKnown RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 GYG1P46976 350 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 HSD17B4P51659 736 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 GRAPQ13588 217 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 ARHGEF7Q14155 803 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 LBRQ14739 615 aaKnown RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 TBC1D9BQ66K14 1250 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 GLB1LQ6UWU2 654 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 C16orf62Q7Z3J2 963 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 DDX53Q86TM3 631 aaKnown RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 DCP1BQ8IZD4 617 aaKnown RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 CXorf38Q8TB03 319 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 GRAPLQ8TC17 118 aaPredicted RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 PDCD6IPQ8WUM4 868 aaKnown RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 DCAF4Q8WV16 495 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.27□□□□□ -1.732e-6■■■■■ 29
UBR3-202ENST00000392632 HSPH1Q92598 858 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 USP13Q92995 863 aaPredicted RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 DTNBP1Q96EV8 351 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 NAF1Q96HR8 494 aaKnown RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 EGFL8Q99944 293 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 SLF1Q9BQI6 1058 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 YIPF2Q9BWQ6 316 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 MRPL46Q9H2W6 279 aaKnown RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 SUDS3Q9H7L9 328 aaPredicted RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 ATP6V0A4Q9HBG4 840 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 NGRNQ9NPE2 291 aaKnown RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 CYP26B1Q9NR63 512 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 BFARQ9NZS9 450 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 KLHL8Q9P2G9 620 aaPredicted RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 FRMPD2Q68DX3 1309 aaPredicted RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 ZC3H4Q9UPT8 1303 aaKnown RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 DISP3Q9P2K9 1392 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 USP17L15C9J2P7 530 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 USP17L13C9JLJ4 530 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 USP17L11C9JVI0 530 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 USP17L18D6R9N7 530 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 USP17L22D6RA61 530 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 USP17L17D6RBQ6 530 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 USP17L19D6RCP7 530 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 USP17L20D6RJB6 530 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 PSMD3O43242 534 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms