RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 CDC25BP30305 580 aa13.53□□□□□ -0.24
SPTBN1-203ENST00000389980 YWHABP31946 246 aaKnown RBP13.53□□□□□ -0.24
SPTBN1-203ENST00000389980 PSMD2Q13200 908 aa13.53□□□□□ -0.24
SPTBN1-203ENST00000389980 GRM1Q13255 1194 aa13.53□□□□□ -0.24
SPTBN1-203ENST00000389980 LY6KQ17RY6 165 aa13.53□□□□□ -0.24
SPTBN1-203ENST00000389980 PLA2G4FQ68DD2 849 aa13.53□□□□□ -0.24
SPTBN1-203ENST00000389980 SWSAP1Q6NVH7 229 aa13.53□□□□□ -0.24
SPTBN1-203ENST00000389980 FBXO16Q8IX29 292 aaPredicted RBP13.53□□□□□ -0.24
SPTBN1-203ENST00000389980 KCTD17Q8N5Z5 321 aa13.53□□□□□ -0.24
SPTBN1-203ENST00000389980 SRRTQ9BXP5 876 aaKnown RBP13.53□□□□□ -0.24
SPTBN1-203ENST00000389980 GABBR1Q9UBS5 961 aa13.53□□□□□ -0.24
SPTBN1-203ENST00000389980 OFD1O75665 1012 aa13.52□□□□□ -0.24
SPTBN1-203ENST00000389980 ARIH2O95376 493 aa13.52□□□□□ -0.24
SPTBN1-203ENST00000389980 PSMC5P62195 406 aa13.52□□□□□ -0.24
SPTBN1-203ENST00000389980 COBLL1Q53SF7 1204 aa13.52□□□□□ -0.24
SPTBN1-203ENST00000389980 TMEM63BQ5T3F8 832 aa13.52□□□□□ -0.24
SPTBN1-203ENST00000389980 PADI6Q6TGC4 694 aa13.52□□□□□ -0.24
SPTBN1-203ENST00000389980 APTXQ7Z2E3 356 aaKnown RBP13.52□□□□□ -0.24
SPTBN1-203ENST00000389980 CCDC186Q7Z3E2 898 aa13.52□□□□□ -0.24
SPTBN1-203ENST00000389980 FILIP1Q7Z7B0 1213 aa13.52□□□□□ -0.24
SPTBN1-203ENST00000389980 IRF2BP1Q8IU81 584 aa13.52□□□□□ -0.24
SPTBN1-203ENST00000389980 CCDC60Q8IWA6 550 aaPredicted RBP13.52□□□□□ -0.24
SPTBN1-203ENST00000389980 NELFCDQ8IXH7 590 aa13.52□□□□□ -0.24
SPTBN1-203ENST00000389980 ZIC5Q96T25 663 aa13.52□□□□□ -0.24
SPTBN1-203ENST00000389980 SENP7Q9BQF6 1050 aa13.52□□□□□ -0.24
SPTBN1-203ENST00000389980 ABT1Q9ULW3 272 aaKnown RBP13.52□□□□□ -0.24
SPTBN1-203ENST00000389980 ZNF862O60290 1169 aa13.52□□□□□ -0.25
SPTBN1-203ENST00000389980 TBCAO75347 108 aaKnown RBP13.52□□□□□ -0.25
SPTBN1-203ENST00000389980 RARRES1P49788 294 aa13.52□□□□□ -0.25
SPTBN1-203ENST00000389980 NPEPPSP55786 919 aa13.52□□□□□ -0.25
SPTBN1-203ENST00000389980 ARID5BQ14865 1188 aa13.52□□□□□ -0.25
SPTBN1-203ENST00000389980 FAM110CQ1W6H9 321 aa13.52□□□□□ -0.25
SPTBN1-203ENST00000389980 ABHD15Q6UXT9 468 aa13.52□□□□□ -0.25
SPTBN1-203ENST00000389980 TMC6Q7Z403 805 aa13.52□□□□□ -0.25
SPTBN1-203ENST00000389980 GPR142Q7Z601 462 aa13.52□□□□□ -0.25
SPTBN1-203ENST00000389980 MYOCDQ8IZQ8 938 aa13.52□□□□□ -0.25
SPTBN1-203ENST00000389980 GUF1Q8N442 669 aaKnown RBP13.52□□□□□ -0.25
SPTBN1-203ENST00000389980 CSGALNACT2Q8N6G5 542 aa13.52□□□□□ -0.25
SPTBN1-203ENST00000389980 PDGFCQ9NRA1 345 aa13.52□□□□□ -0.25
SPTBN1-203ENST00000389980 IVNS1ABPQ9Y6Y0 642 aa13.52□□□□□ -0.25
SPTBN1-203ENST00000389980 MANSC4A6NHS7 340 aaPredicted RBP13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 BACH1O14867 736 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 PSAPP07602 524 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 SLC10A3P09131 477 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 TAF1CQ15572 869 aaPredicted RBP13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 CENPPQ6IPU0 288 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 C4orf19Q8IY42 314 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 SMAP1Q8IYB5 467 aaPredicted RBP13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 C17orf53Q8N3J3 647 aaPredicted RBP13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 SCFD1Q8WVM8 642 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 GTPBP4Q9BZE4 634 aaKnown RBP13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 TLL2Q9Y6L7 1015 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 BICDL2A1A5D9 508 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 FAM155AB1AL88 458 aaPredicted RBP13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 KCNJ18B7U540 433 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 TEX33O43247 280 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 USO1O60763 962 aaKnown RBP13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 FARP2O94887 1054 aaPredicted RBP13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 FAM13AO94988 1023 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 LYPLA2O95372 231 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 MYBP10242 640 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 KCNJ12Q14500 433 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 KRT31Q15323 416 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 ZNF792Q3KQV3 632 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 XKR9Q5GH70 373 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 ANO5Q75V66 913 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 ARMCX2Q7L311 632 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 MYCT1Q8N699 235 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 RDM1Q8NG50 284 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 MRPL44Q9H9J2 332 aaKnown RBP13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 TAB2Q9NYJ8 693 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 COL4A3BPQ9Y5P4 624 aa13.51□□□□□ -0.25
SPTBN1-203ENST00000389980 SYNGAP1Q96PV0 1343 aa13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 GOLGA6L6A8MZA4 724 aa13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 B4DLN1 442 aa13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 NKRFO15226 690 aaKnown RBP eCLIP13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 CBFA2T2O43439 604 aa13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 HIP1RO75146 1068 aa13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 PRPF6O94906 941 aaKnown RBP13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 GGPS1O95749 300 aa13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 SUPT20HL2P0C7V6 817 aa13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 NMT1P30419 496 aaKnown RBP13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 PPP1R2P41236 205 aa13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 TCP11X2Q5H9J9 407 aa13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 IFNL1Q8IU54 200 aa13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 DAW1Q8N136 415 aa13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 COPS5Q92905 334 aa13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 CCDC43Q96MW1 224 aaKnown RBP13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 MPHOSPH6Q99547 160 aaKnown RBP13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 VPS16Q9H269 839 aa13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 KCNF1Q9H3M0 494 aa13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 DBR1Q9UK59 544 aaKnown RBP13.5□□□□□ -0.25
SPTBN1-203ENST00000389980 ZNF500O60304 480 aaPredicted RBP13.49□□□□□ -0.25
SPTBN1-203ENST00000389980 STBD1O95210 358 aa13.49□□□□□ -0.25
SPTBN1-203ENST00000389980 KCNA1Q09470 495 aa13.49□□□□□ -0.25
SPTBN1-203ENST00000389980 MAPK7Q13164 816 aa13.49□□□□□ -0.25
SPTBN1-203ENST00000389980 MIS18BP1Q6P0N0 1132 aa13.49□□□□□ -0.25
SPTBN1-203ENST00000389980 SMC1BQ8NDV3 1235 aa13.49□□□□□ -0.25
SPTBN1-203ENST00000389980 PARVGQ9HBI0 331 aa13.49□□□□□ -0.25
SPTBN1-203ENST00000389980 DDX41Q9UJV9 622 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms