RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ARHGEF3Q9NR81 526 aa15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 MYH2Q9UKX2 1941 aa15.98■□□□□ 0.15
VPS9D1-201ENST00000389386 MINDY4BA8MYZ0 360 aa15.97■□□□□ 0.15
VPS9D1-201ENST00000389386 EIF3BP55884 814 aaKnown RBP15.97■□□□□ 0.15
VPS9D1-201ENST00000389386 TRAPPC3LQ5T215 181 aa15.97■□□□□ 0.15
VPS9D1-201ENST00000389386 ANO7Q6IWH7 933 aa15.97■□□□□ 0.15
VPS9D1-201ENST00000389386 PIK3AP1Q6ZUJ8 805 aa15.97■□□□□ 0.15
VPS9D1-201ENST00000389386 KLHL29Q96CT2 875 aa15.97■□□□□ 0.15
VPS9D1-201ENST00000389386 CCDC134Q9H6E4 229 aa15.97■□□□□ 0.15
VPS9D1-201ENST00000389386 LRRC42Q9Y546 428 aa15.97■□□□□ 0.15
VPS9D1-201ENST00000389386 GOLGA6L10A0A0M3HER8 536 aa15.97■□□□□ 0.15
VPS9D1-201ENST00000389386 KCNK3O14649 394 aa15.97■□□□□ 0.15
VPS9D1-201ENST00000389386 MSH2P43246 934 aa15.97■□□□□ 0.15
VPS9D1-201ENST00000389386 BNIP1Q12981 228 aa15.97■□□□□ 0.15
VPS9D1-201ENST00000389386 STK4Q13043 487 aa15.97■□□□□ 0.15
VPS9D1-201ENST00000389386 KIF2BQ8N4N8 673 aa15.97■□□□□ 0.15
VPS9D1-201ENST00000389386 TAF4BQ92750 862 aa15.97■□□□□ 0.15
VPS9D1-201ENST00000389386 EZH1Q92800 747 aaPredicted RBP15.97■□□□□ 0.15
VPS9D1-201ENST00000389386 NARFQ9UHQ1 456 aa15.97■□□□□ 0.15
VPS9D1-201ENST00000389386 MYH1P12882 1939 aa15.97■□□□□ 0.15
VPS9D1-201ENST00000389386 TAF1LQ8IZX4 1826 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 CYP2D7A0A087X1C5 515 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 NPTXRO95502 500 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 VIMP08670 466 aaKnown RBP15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 COPS2P61201 443 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 LAMB3Q13751 1172 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 KIAA0753Q2KHM9 967 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 RPUSD2Q8IZ73 545 aaKnown RBP15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 ACTRT1Q8TDG2 376 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 RAB17Q9H0T7 212 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 TMX4Q9H1E5 349 aaPredicted RBP15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 TFCP2L1Q9NZI6 479 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 RGL1Q9NZL6 768 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 LY75O60449 1722 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 GPR75-ASB3A0A0A6YYF3 556 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 MAP3K13O43283 966 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 SNX3O60493 162 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 RPS6KA1Q15418 735 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 ARMC3Q5W041 872 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 MAEAQ7L5Y9 396 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 KCNV2Q8TDN2 545 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 SEC14L1Q92503 715 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 SELENOSQ9BQE4 189 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 AP1M1Q9BXS5 423 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 TXLNGYQ9BZA5 131 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 DDX47Q9H0S4 455 aaKnown RBP15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 PIDD1Q9HB75 910 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 GGT7Q9UJ14 662 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 ASB3Q9Y575 518 aa15.96■□□□□ 0.15
VPS9D1-201ENST00000389386 TIAM2Q8IVF5 1701 aa15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 RREB1Q92766 1687 aa15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 LRRD1A4D1F6 860 aa15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 PP2D1A8MPX8 630 aa15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 ABLIM1O14639 778 aa15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 PPFIA2O75334 1257 aa15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 PLEKHA8P1O95397 391 aa15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 OAS1P00973 400 aaKnown RBP15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 DYNLL1P63167 89 aaKnown RBP15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 MXRA7P84157 204 aa15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 SEC23AQ15436 765 aa15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 KCTD19Q17RG1 926 aaPredicted RBP15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 SLC4A8Q2Y0W8 1093 aa15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 TDRD12Q587J7 1177 aaKnown RBP15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 CCDC178Q5BJE1 867 aa15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 APLFQ8IW19 511 aaPredicted RBP15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 LRRC15Q8TF66 581 aa15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 TEKT4Q8WW24 435 aa15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 EDEM3Q9BZQ6 932 aa15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 MINPP1Q9UNW1 487 aa15.96■□□□□ 0.14
VPS9D1-201ENST00000389386 LRP5O75197 1615 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 SPDYE5A6NIY4 337 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 SHBGP04278 402 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 TUBP50607 506 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 LACTBP83111 547 aaPredicted RBP15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 ATP11AP98196 1134 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 EVX2Q03828 476 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 ASRGL1Q7L266 308 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 HOOK3Q86VS8 718 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 ANKS1AQ92625 1134 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 PGM2Q96G03 612 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 PLIN2Q99541 437 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 PRMT1Q99873 361 aaKnown RBP15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 SEMA6BQ9H3T3 888 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 LUC7LQ9NQ29 371 aaKnown RBP15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 INTS9Q9NV88 658 aaKnown RBP15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 STK38LQ9Y2H1 464 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 ADAMTS3O15072 1205 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 CEP104O60308 925 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 TLR2O60603 784 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 PYGLP06737 847 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 PDE4DQ08499 809 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 PLS1Q14651 629 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 CCDC38Q502W7 563 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 SPDYCQ5MJ68 293 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 PPP1R15BQ5SWA1 713 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 NUGGCQ68CJ6 796 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 TRIM68Q6AZZ1 485 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 CLEC4GQ6UXB4 293 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 SETDB2Q96T68 719 aa15.95■□□□□ 0.14
VPS9D1-201ENST00000389386 EPAS1Q99814 870 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms