RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 SLC5A1P13866 664 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 PRPHP41219 470 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 TECP42680 631 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 CCNG1P51959 295 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 ZNF131P52739 623 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 AMPD3Q01432 767 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 CWF19L1Q69YN2 538 aaKnown RBP16.3■□□□□ 0.2
CTNS-202ENST00000381870 MMTAG2Q9BU76 263 aaKnown RBP16.3■□□□□ 0.2
CTNS-202ENST00000381870 NSRP1Q9H0G5 558 aaKnown RBP16.3■□□□□ 0.2
CTNS-202ENST00000381870 CCDC134Q9H6E4 229 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 USP15Q9Y4E8 981 aaPredicted RBP16.3■□□□□ 0.2
CTNS-202ENST00000381870 TNS3Q68CZ2 1445 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 ALS2Q96Q42 1657 aa16.3■□□□□ 0.2
CTNS-202ENST00000381870 SPDYE3A6NKU9 549 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 SMIM24O75264 130 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 NUDT17P0C025 328 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 COPB2P35606 906 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 SLCO1A2P46721 670 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 PMS2P54278 862 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 POU5F1Q01860 360 aaKnown RBP16.29■□□□□ 0.2
CTNS-202ENST00000381870 LRRC14Q15048 493 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 ASIC2Q16515 512 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 CABLES1Q8TDN4 633 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 CCDC113Q9H0I3 377 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 PIDD1Q9HB75 910 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 FGFR1OP2Q9NVK5 253 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 NKX1-2Q9UD57 310 aaPredicted RBP16.29■□□□□ 0.2
CTNS-202ENST00000381870 MAGEB6P1A0A0J9YX57 407 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 IRS4O14654 1257 aaPredicted RBP16.29■□□□□ 0.2
CTNS-202ENST00000381870 LACTBP83111 547 aaPredicted RBP16.29■□□□□ 0.2
CTNS-202ENST00000381870 ATP11AP98196 1134 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 PTK2Q05397 1052 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 SLC29A2Q14542 456 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 CCDC38Q502W7 563 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 DENND2CQ68D51 928 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 ANO7Q6IWH7 933 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 DAAM2Q86T65 1068 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 GUF1Q8N442 669 aaKnown RBP16.29■□□□□ 0.2
CTNS-202ENST00000381870 TPCN2Q8NHX9 752 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 NEK9Q8TD19 979 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 PABPC3Q9H361 631 aaKnown RBP16.29■□□□□ 0.2
CTNS-202ENST00000381870 ZDHHC18Q9NUE0 388 aa16.29■□□□□ 0.2
CTNS-202ENST00000381870 XIRP1Q702N8 1843 aaKnown RBP16.29■□□□□ 0.2
CTNS-202ENST00000381870 DYNLL1P63167 89 aaKnown RBP16.28■□□□□ 0.2
CTNS-202ENST00000381870 LRRC63Q05C16 580 aa16.28■□□□□ 0.2
CTNS-202ENST00000381870 SEPT2Q15019 361 aa16.28■□□□□ 0.2
CTNS-202ENST00000381870 ASRGL1Q7L266 308 aa16.28■□□□□ 0.2
CTNS-202ENST00000381870 ZNF571Q7Z3V5 609 aaPredicted RBP16.28■□□□□ 0.2
CTNS-202ENST00000381870 PEX26Q7Z412 305 aa16.28■□□□□ 0.2
CTNS-202ENST00000381870 ADAT2Q7Z6V5 191 aaKnown RBP16.28■□□□□ 0.2
CTNS-202ENST00000381870 RASGEF1CQ8N431 466 aa16.28■□□□□ 0.2
CTNS-202ENST00000381870 SLC17A8Q8NDX2 589 aa16.28■□□□□ 0.2
CTNS-202ENST00000381870 MGARPQ8TDB4 240 aa16.28■□□□□ 0.2
CTNS-202ENST00000381870 EPS8L3Q8TE67 593 aaKnown RBP16.28■□□□□ 0.2
CTNS-202ENST00000381870 ZMYND8Q9ULU4 1186 aaPredicted RBP16.28■□□□□ 0.2
CTNS-202ENST00000381870 GOLGA6L10A0A0M3HER8 536 aa16.28■□□□□ 0.2
CTNS-202ENST00000381870 CCDC169A6NNP5 214 aa16.28■□□□□ 0.2
CTNS-202ENST00000381870 BTNL10A8MVZ5 291 aa16.28■□□□□ 0.2
CTNS-202ENST00000381870 FERP16591 822 aa16.28■□□□□ 0.2
CTNS-202ENST00000381870 PDE6CP51160 858 aa16.28■□□□□ 0.2
CTNS-202ENST00000381870 PLS1Q14651 629 aa16.28■□□□□ 0.2
CTNS-202ENST00000381870 CNGA2Q16280 664 aa16.28■□□□□ 0.2
CTNS-202ENST00000381870 SLC5A9Q2M3M2 681 aa16.28■□□□□ 0.2
CTNS-202ENST00000381870 GIGYF2Q6Y7W6 1299 aaKnown RBP16.28■□□□□ 0.2
CTNS-202ENST00000381870 NLRP10Q86W26 655 aa16.28■□□□□ 0.2
CTNS-202ENST00000381870 FITM2Q8N6M3 262 aa16.28■□□□□ 0.2
CTNS-202ENST00000381870 AIPL1Q9NZN9 384 aa16.28■□□□□ 0.2
CTNS-202ENST00000381870 TCP11X1B4DZS4 312 aa16.27■□□□□ 0.2
CTNS-202ENST00000381870 RTN3O95197 1032 aaPredicted RBP16.27■□□□□ 0.2
CTNS-202ENST00000381870 FGGP02679 453 aa16.27■□□□□ 0.2
CTNS-202ENST00000381870 OR52Z1P0C646 297 aa16.27■□□□□ 0.2
CTNS-202ENST00000381870 KIF5BP33176 963 aa16.27■□□□□ 0.2
CTNS-202ENST00000381870 PLTPP55058 493 aa16.27■□□□□ 0.2
CTNS-202ENST00000381870 ARMC3Q5W041 872 aa16.27■□□□□ 0.2
CTNS-202ENST00000381870 KIF6Q6ZMV9 814 aa16.27■□□□□ 0.2
CTNS-202ENST00000381870 ARHGAP27Q6ZUM4 889 aa16.27■□□□□ 0.2
CTNS-202ENST00000381870 UNC13DQ70J99 1090 aa16.27■□□□□ 0.2
CTNS-202ENST00000381870 SV2BQ7L1I2 683 aa16.27■□□□□ 0.2
CTNS-202ENST00000381870 AK8Q96MA6 479 aa16.27■□□□□ 0.2
CTNS-202ENST00000381870 ABCF2Q9UG63 623 aa16.27■□□□□ 0.2
CTNS-202ENST00000381870 COL4A3BPQ9Y5P4 624 aa16.27■□□□□ 0.2
CTNS-202ENST00000381870 CCNT1O60563 726 aaKnown RBP16.27■□□□□ 0.19
CTNS-202ENST00000381870 PDHA1P08559 390 aa16.27■□□□□ 0.19
CTNS-202ENST00000381870 KLRC3Q07444 240 aa16.27■□□□□ 0.19
CTNS-202ENST00000381870 LETM2Q2VYF4 491 aa16.27■□□□□ 0.19
CTNS-202ENST00000381870 SPDYCQ5MJ68 293 aa16.27■□□□□ 0.19
CTNS-202ENST00000381870 MFN1Q8IWA4 741 aa16.27■□□□□ 0.19
CTNS-202ENST00000381870 GLG1Q92896 1179 aa16.27■□□□□ 0.19
CTNS-202ENST00000381870 BLOC1S4Q9NUP1 217 aa16.27■□□□□ 0.19
CTNS-202ENST00000381870 DBR1Q9UK59 544 aaKnown RBP16.27■□□□□ 0.19
CTNS-202ENST00000381870 STXBP5LQ9Y2K9 1186 aa16.27■□□□□ 0.19
CTNS-202ENST00000381870 TRAF5O00463 557 aa16.26■□□□□ 0.19
CTNS-202ENST00000381870 LAD1O00515 517 aa16.26■□□□□ 0.19
CTNS-202ENST00000381870 SSR1P43307 286 aaKnown RBP16.26■□□□□ 0.19
CTNS-202ENST00000381870 MXRA7P84157 204 aa16.26■□□□□ 0.19
CTNS-202ENST00000381870 TEX9Q8N6V9 391 aa16.26■□□□□ 0.19
CTNS-202ENST00000381870 IFT74Q96LB3 600 aa16.26■□□□□ 0.19
CTNS-202ENST00000381870 BSDC1Q9NW68 430 aaPredicted RBP16.26■□□□□ 0.19
CTNS-202ENST00000381870 SNX24Q9Y343 169 aa16.26■□□□□ 0.19
CTNS-202ENST00000381870 KCPQ6ZWJ8 1503 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms