RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 SLC29A2Q14542 456 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 NEK8Q86SG6 692 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 CERKQ8TCT0 537 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 ANKS1AQ92625 1134 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 SEMA6BQ9H3T3 888 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 TRIM33Q9UPN9 1127 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 C15orf41Q9Y2V0 281 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 FAM205AQ6ZU69 1335 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 MRC1P22897 1456 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 CLIC2O15247 247 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 CTCFP49711 727 aaPredicted RBP13.2□□□□□ -0.3
SHOX-203ENST00000381578 TRIM28Q13263 835 aaKnown RBP13.2□□□□□ -0.3
SHOX-203ENST00000381578 SLC30A9Q6PML9 568 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 CCDC65Q8IXS2 484 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 METTL13Q8N6R0 699 aa13.2□□□□□ -0.3
SHOX-203ENST00000381578 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.2□□□□□ -0.3
SHOX-203ENST00000381578 ARMCX3Q9UH62 379 aaPredicted RBP13.2□□□□□ -0.3
SHOX-203ENST00000381578 MSH2P43246 934 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 PDE6CP51160 858 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 EXOC3L4Q17RC7 722 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 FAM43BQ6ZT52 329 aaPredicted RBP13.19□□□□□ -0.3
SHOX-203ENST00000381578 REXO1Q8N1G1 1221 aaKnown RBP13.19□□□□□ -0.3
SHOX-203ENST00000381578 GLIS3Q8NEA6 775 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 ERGIC2Q96RQ1 377 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 USP17L8P0C7I0 530 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 PLCG2P16885 1265 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 ALDH5A1P51649 535 aaPredicted RBP13.19□□□□□ -0.3
SHOX-203ENST00000381578 MESDQ14696 234 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 PFKFB3Q16875 520 aaPredicted RBP13.19□□□□□ -0.3
SHOX-203ENST00000381578 CCDC152Q4G0S7 254 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 BARGINQ6ZT62 677 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 YTHDF3Q7Z739 585 aaKnown RBP13.19□□□□□ -0.3
SHOX-203ENST00000381578 PBKQ96KB5 322 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 NUCKS1Q9H1E3 243 aaKnown RBP13.19□□□□□ -0.3
SHOX-203ENST00000381578 GDF3Q9NR23 364 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 ADAMTS3O15072 1205 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 LUC7L3O95232 432 aaKnown RBP13.19□□□□□ -0.3
SHOX-203ENST00000381578 SHBGP04278 402 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 LONRF1Q17RB8 773 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 GPBP1Q86WP2 473 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 ERICH1Q86X53 443 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 EPS8L3Q8TE67 593 aaKnown RBP13.19□□□□□ -0.3
SHOX-203ENST00000381578 TMEM260Q9NX78 707 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 TACC3Q9Y6A5 838 aa13.19□□□□□ -0.3
SHOX-203ENST00000381578 FRMPD2Q68DX3 1309 aaPredicted RBP13.19□□□□□ -0.3
SHOX-203ENST00000381578 hCG_2014768A0A024R1R8 64 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 EME2A4GXA9 379 aaPredicted RBP13.18□□□□□ -0.3
SHOX-203ENST00000381578 ERVV-1B6SEH8 477 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 EVX2Q03828 476 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 ALX1Q15699 326 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 SLC18A3Q16572 532 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 CYP4F22Q6NT55 531 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 USP17L2Q6R6M4 530 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 WDR91A4D1P6 747 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 MYMKA6NI61 221 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 GNPATO15228 680 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 DDAH1O94760 285 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 XRCC5P13010 732 aaKnown RBP13.18□□□□□ -0.3
SHOX-203ENST00000381578 RBM5P52756 815 aaKnown RBP eCLIP13.18□□□□□ -0.3
SHOX-203ENST00000381578 NAB2Q15742 525 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 SEL1L2Q5TEA6 688 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 GSTA5Q7RTV2 222 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 ZSCAN29Q8IWY8 852 aaPredicted RBP13.18□□□□□ -0.3
SHOX-203ENST00000381578 SRRM1Q8IYB3 904 aaKnown RBP13.18□□□□□ -0.3
SHOX-203ENST00000381578 TATDN2Q93075 761 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 CCNL1Q9UK58 526 aaPredicted RBP13.18□□□□□ -0.3
SHOX-203ENST00000381578 KIAA1024Q9UPX6 916 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 TNS2Q63HR2 1409 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 GRID2IPA4D2P6 1211 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 ORC4O43929 436 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 NQO1P15559 274 aaKnown RBP13.18□□□□□ -0.3
SHOX-203ENST00000381578 PRLRP16471 622 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 KRT15P19012 456 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 ZNF76P36508 570 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 HSPA9P38646 679 aaKnown RBP13.18□□□□□ -0.3
SHOX-203ENST00000381578 PTK2Q05397 1052 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 TROAPQ12815 778 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 TNIP1Q15025 636 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 VPS72Q15906 364 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 PARP10Q53GL7 1025 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 HP1BP3Q5SSJ5 553 aaPredicted RBP13.18□□□□□ -0.3
SHOX-203ENST00000381578 BZW1Q7L1Q6 419 aaKnown RBP13.18□□□□□ -0.3
SHOX-203ENST00000381578 KRT25Q7Z3Z0 450 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 TAB3Q8N5C8 712 aaPredicted RBP13.18□□□□□ -0.3
SHOX-203ENST00000381578 SLC44A5Q8NCS7 719 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 STMN2Q93045 179 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 IQCDQ96DY2 449 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 NEUROG2Q9H2A3 272 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 CEP72Q9P209 647 aa13.18□□□□□ -0.3
SHOX-203ENST00000381578 TBCAO75347 108 aaKnown RBP13.17□□□□□ -0.3
SHOX-203ENST00000381578 GNAT1P11488 350 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 SLC9A1P19634 815 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 STAT1P42224 750 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 ITPK1Q13572 414 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 ZC3H18Q86VM9 953 aaKnown RBP13.17□□□□□ -0.3
SHOX-203ENST00000381578 SYCE1Q8N0S2 351 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 CCHCR1Q8TD31 782 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 MCUR1Q96AQ8 359 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 COA7Q96BR5 231 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 GBP5Q96PP8 586 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms