RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 PADI3Q9ULW8 664 aa26.37■■□□□ 1.81
U2AF1-202ENST00000380276 GINS2Q9Y248 185 aa26.37■■□□□ 1.81
U2AF1-202ENST00000380276 PCDHA2Q9Y5H9 948 aa26.37■■□□□ 1.81
U2AF1-202ENST00000380276 NFASCO94856 1347 aa26.37■■□□□ 1.81
U2AF1-202ENST00000380276 LTBRP36941 435 aa26.36■■□□□ 1.81
U2AF1-202ENST00000380276 DLX2Q07687 328 aaPredicted RBP26.36■■□□□ 1.81
U2AF1-202ENST00000380276 NFX1Q12986 1120 aaKnown RBP26.36■■□□□ 1.81
U2AF1-202ENST00000380276 RTN1Q16799 776 aa26.36■■□□□ 1.81
U2AF1-202ENST00000380276 RTN4RL1Q86UN2 441 aaPredicted RBP26.36■■□□□ 1.81
U2AF1-202ENST00000380276 SGMS1Q86VZ5 419 aa26.36■■□□□ 1.81
U2AF1-202ENST00000380276 CMTR2Q8IYT2 770 aaKnown RBP26.36■■□□□ 1.81
U2AF1-202ENST00000380276 PPP2R3CQ969Q6 453 aa26.36■■□□□ 1.81
U2AF1-202ENST00000380276 TCEANC2Q96MN5 208 aa26.36■■□□□ 1.81
U2AF1-202ENST00000380276 CELF4Q9BZC1 486 aaKnown RBP26.36■■□□□ 1.81
U2AF1-202ENST00000380276 RIC8AQ9NPQ8 531 aa26.36■■□□□ 1.81
U2AF1-202ENST00000380276 NAP1L2Q9ULW6 460 aaPredicted RBP26.36■■□□□ 1.81
U2AF1-202ENST00000380276 POTEB3A0JP26 581 aa26.35■■□□□ 1.81
U2AF1-202ENST00000380276 BACH1O14867 736 aa26.35■■□□□ 1.81
U2AF1-202ENST00000380276 LINC01565O15544 149 aa26.35■■□□□ 1.81
U2AF1-202ENST00000380276 SCG2P13521 617 aa26.35■■□□□ 1.81
U2AF1-202ENST00000380276 NDUFV1P49821 464 aa26.35■■□□□ 1.81
U2AF1-202ENST00000380276 TTC3P53804 2025 aa26.35■■□□□ 1.81
U2AF1-202ENST00000380276 KRT76Q01546 638 aa26.35■■□□□ 1.81
U2AF1-202ENST00000380276 TMEM266Q2M3C6 531 aa26.35■■□□□ 1.81
U2AF1-202ENST00000380276 RNF20Q5VTR2 975 aa26.35■■□□□ 1.81
U2AF1-202ENST00000380276 APOA5Q6Q788 366 aa26.35■■□□□ 1.81
U2AF1-202ENST00000380276 POTEBQ6S5H4 581 aa26.35■■□□□ 1.81
U2AF1-202ENST00000380276 PLPPR4Q7Z2D5 763 aa26.35■■□□□ 1.81
U2AF1-202ENST00000380276 UPF3BQ9BZI7 483 aaKnown RBP26.35■■□□□ 1.81
U2AF1-202ENST00000380276 AGO4Q9HCK5 861 aaKnown RBP26.35■■□□□ 1.81
U2AF1-202ENST00000380276 TMEM260Q9NX78 707 aa26.35■■□□□ 1.81
U2AF1-202ENST00000380276 PLAGL2Q9UPG8 496 aa26.35■■□□□ 1.81
U2AF1-202ENST00000380276 SQORQ9Y6N5 450 aa26.35■■□□□ 1.81
U2AF1-202ENST00000380276 MBTPS2O43462 519 aa26.34■■□□□ 1.81
U2AF1-202ENST00000380276 FOSP01100 380 aaPredicted RBP26.34■■□□□ 1.81
U2AF1-202ENST00000380276 ITGB3BPQ13352 177 aaPredicted RBP26.34■■□□□ 1.81
U2AF1-202ENST00000380276 CTC1Q2NKJ3 1217 aa26.34■■□□□ 1.81
U2AF1-202ENST00000380276 CEP55Q53EZ4 464 aa26.34■■□□□ 1.81
U2AF1-202ENST00000380276 SPOUT1Q5T280 376 aaKnown RBP26.34■■□□□ 1.81
U2AF1-202ENST00000380276 TYW1BQ6NUM6 668 aa26.34■■□□□ 1.81
U2AF1-202ENST00000380276 PPP1R18Q6NYC8 613 aa26.34■■□□□ 1.81
U2AF1-202ENST00000380276 MTHFD1LQ6UB35 978 aa26.34■■□□□ 1.81
U2AF1-202ENST00000380276 NEK1Q96PY6 1258 aa26.34■■□□□ 1.81
U2AF1-202ENST00000380276 CD207Q9UJ71 328 aa26.34■■□□□ 1.81
U2AF1-202ENST00000380276 KIAA1671Q9BY89 1806 aa26.34■■□□□ 1.81
U2AF1-202ENST00000380276 IGSF9BQ9UPX0 1349 aa26.34■■□□□ 1.81
U2AF1-202ENST00000380276 SMCO2A6NFE2 343 aa26.33■■□□□ 1.81
U2AF1-202ENST00000380276 ZBTB43O43298 467 aa26.33■■□□□ 1.81
U2AF1-202ENST00000380276 TBX10O75333 385 aa26.33■■□□□ 1.81
U2AF1-202ENST00000380276 GATMP50440 423 aa26.33■■□□□ 1.81
U2AF1-202ENST00000380276 P2RX5Q93086 422 aa26.33■■□□□ 1.81
U2AF1-202ENST00000380276 POP1Q99575 1024 aaKnown RBP26.33■■□□□ 1.81
U2AF1-202ENST00000380276 V9GY48 417 aaPredicted RBP26.33■■□□□ 1.81
U2AF1-202ENST00000380276 LOXHD1Q8IVV2 1947 aa26.33■■□□□ 1.81
U2AF1-202ENST00000380276 SMIM35A0A1B0GVV1 85 aa26.32■■□□□ 1.8
U2AF1-202ENST00000380276 GOLGA8AA7E2F4 631 aa26.32■■□□□ 1.8
U2AF1-202ENST00000380276 GOLGA8BA8MQT2 603 aa26.32■■□□□ 1.8
U2AF1-202ENST00000380276 PPFIA3O75145 1194 aa26.32■■□□□ 1.8
U2AF1-202ENST00000380276 ITGB1P05556 798 aa26.32■■□□□ 1.8
U2AF1-202ENST00000380276 KLRC1P26715 233 aa26.32■■□□□ 1.8
U2AF1-202ENST00000380276 IRS1P35568 1242 aa26.32■■□□□ 1.8
U2AF1-202ENST00000380276 SMAD4Q13485 552 aaKnown RBP26.32■■□□□ 1.8
U2AF1-202ENST00000380276 FAM160B1Q5W0V3 765 aa26.32■■□□□ 1.8
U2AF1-202ENST00000380276 KLHL23Q8NBE8 558 aa26.32■■□□□ 1.8
U2AF1-202ENST00000380276 POF1BQ8WVV4 589 aa26.32■■□□□ 1.8
U2AF1-202ENST00000380276 MYO7AQ13402 2215 aa26.31■■□□□ 1.8
U2AF1-202ENST00000380276 STXBP3O00186 592 aa26.31■■□□□ 1.8
U2AF1-202ENST00000380276 DNAJB1P25685 340 aa26.31■■□□□ 1.8
U2AF1-202ENST00000380276 SMAD2Q15796 467 aaKnown RBP26.31■■□□□ 1.8
U2AF1-202ENST00000380276 ADGRD2Q7Z7M1 963 aa26.31■■□□□ 1.8
U2AF1-202ENST00000380276 NME8Q8N427 588 aa26.31■■□□□ 1.8
U2AF1-202ENST00000380276 PPP1R16BQ96T49 567 aa26.31■■□□□ 1.8
U2AF1-202ENST00000380276 PCDHB7Q9Y5E2 793 aa26.31■■□□□ 1.8
U2AF1-202ENST00000380276 C19orf67A6NJJ6 358 aa26.3■■□□□ 1.8
U2AF1-202ENST00000380276 HBP1O60381 514 aa26.3■■□□□ 1.8
U2AF1-202ENST00000380276 SLC26A2P50443 739 aa26.3■■□□□ 1.8
U2AF1-202ENST00000380276 AP3B2Q13367 1082 aa26.3■■□□□ 1.8
U2AF1-202ENST00000380276 NAALADL2Q58DX5 795 aa26.3■■□□□ 1.8
U2AF1-202ENST00000380276 JAKMIP3Q5VZ66 844 aa26.3■■□□□ 1.8
U2AF1-202ENST00000380276 PDXDC2PQ6P474 469 aa26.3■■□□□ 1.8
U2AF1-202ENST00000380276 RBM23Q86U06 439 aaKnown RBP26.3■■□□□ 1.8
U2AF1-202ENST00000380276 CKAP2LQ8IYA6 745 aa26.3■■□□□ 1.8
U2AF1-202ENST00000380276 SPPL3Q8TCT6 385 aa26.3■■□□□ 1.8
U2AF1-202ENST00000380276 BRPF3Q9ULD4 1205 aa26.3■■□□□ 1.8
U2AF1-202ENST00000380276 KLF18A0A0U1RQI7 1052 aa26.29■■□□□ 1.8
U2AF1-202ENST00000380276 DENND3A2RUS2 1198 aa26.29■■□□□ 1.8
U2AF1-202ENST00000380276 hCG_1984214I3L0E3 225 aa26.29■■□□□ 1.8
U2AF1-202ENST00000380276 RPS6KA5O75582 802 aa26.29■■□□□ 1.8
U2AF1-202ENST00000380276 SREBF1P36956 1147 aa26.29■■□□□ 1.8
U2AF1-202ENST00000380276 NRIP1P48552 1158 aa26.29■■□□□ 1.8
U2AF1-202ENST00000380276 ADAM15Q13444 863 aa26.29■■□□□ 1.8
U2AF1-202ENST00000380276 CAMK1Q14012 370 aa26.29■■□□□ 1.8
U2AF1-202ENST00000380276 TRMT1LQ7Z2T5 733 aaKnown RBP26.29■■□□□ 1.8
U2AF1-202ENST00000380276 PLA2G4DQ86XP0 818 aa26.29■■□□□ 1.8
U2AF1-202ENST00000380276 ZNF713Q8N859 430 aaPredicted RBP26.29■■□□□ 1.8
U2AF1-202ENST00000380276 MICAL1Q8TDZ2 1067 aa26.29■■□□□ 1.8
U2AF1-202ENST00000380276 TMX1Q9H3N1 280 aa26.29■■□□□ 1.8
U2AF1-202ENST00000380276 ZNF302Q9NR11 478 aa26.29■■□□□ 1.8
U2AF1-202ENST00000380276 BARHL2Q9NY43 387 aa26.29■■□□□ 1.8
U2AF1-202ENST00000380276 TCEAL9Q9UHQ7 104 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms