RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 DDTLA6NHG4 134 aaPredicted RBP27.73■■■□□ 2.03
C9orf40-201ENST00000376854 CALUO43852 315 aaPredicted RBP27.73■■■□□ 2.03
C9orf40-201ENST00000376854 MYBP10242 640 aa27.73■■■□□ 2.03
C9orf40-201ENST00000376854 EXOC3L4Q17RC7 722 aa27.73■■■□□ 2.03
C9orf40-201ENST00000376854 TTMPQ5BVD1 217 aa27.73■■■□□ 2.03
C9orf40-201ENST00000376854 ZNF622Q969S3 477 aaKnown RBP eCLIP27.73■■■□□ 2.03
C9orf40-201ENST00000376854 ARL8AQ96BM9 186 aa27.73■■■□□ 2.03
C9orf40-201ENST00000376854 ZIM3Q96PE6 472 aa27.73■■■□□ 2.03
C9orf40-201ENST00000376854 AMNQ9BXJ7 453 aa27.73■■■□□ 2.03
C9orf40-201ENST00000376854 FAM153BP0C7A2 387 aa27.72■■■□□ 2.03
C9orf40-201ENST00000376854 XRCC5P13010 732 aaKnown RBP27.72■■■□□ 2.03
C9orf40-201ENST00000376854 FAM153CQ494X1 144 aa27.72■■■□□ 2.03
C9orf40-201ENST00000376854 TAF4BQ92750 862 aa27.72■■■□□ 2.03
C9orf40-201ENST00000376854 LENG9Q96B70 501 aa27.72■■■□□ 2.03
C9orf40-201ENST00000376854 FAM153AQ9UHL3 310 aa27.72■■■□□ 2.03
C9orf40-201ENST00000376854 BZW2Q9Y6E2 419 aaKnown RBP27.72■■■□□ 2.03
C9orf40-201ENST00000376854 PDXKO00764 312 aa27.72■■■□□ 2.03
C9orf40-201ENST00000376854 PON1P27169 355 aa27.72■■■□□ 2.03
C9orf40-201ENST00000376854 SKIDA1Q1XH10 827 aa27.72■■■□□ 2.03
C9orf40-201ENST00000376854 DCAF17Q5H9S7 520 aaPredicted RBP27.72■■■□□ 2.03
C9orf40-201ENST00000376854 AKT1S1Q96B36 256 aa27.72■■■□□ 2.03
C9orf40-201ENST00000376854 SPDYE3A6NKU9 549 aa27.71■■■□□ 2.03
C9orf40-201ENST00000376854 FAM86B1E9PN63 330 aa27.71■■■□□ 2.03
C9orf40-201ENST00000376854 FAM86B2P0C5J1 330 aa27.71■■■□□ 2.03
C9orf40-201ENST00000376854 USH1GQ495M9 461 aa27.71■■■□□ 2.03
C9orf40-201ENST00000376854 MCTP2Q6DN12 878 aa27.71■■■□□ 2.03
C9orf40-201ENST00000376854 USP38Q8NB14 1042 aa27.71■■■□□ 2.03
C9orf40-201ENST00000376854 MASTLQ96GX5 879 aa27.71■■■□□ 2.03
C9orf40-201ENST00000376854 ATAD5Q96QE3 1844 aa27.71■■■□□ 2.03
C9orf40-201ENST00000376854 AKAP3O75969 853 aa27.7■■■□□ 2.03
C9orf40-201ENST00000376854 PDE6BP35913 854 aa27.7■■■□□ 2.03
C9orf40-201ENST00000376854 RPS6KA1Q15418 735 aa27.7■■■□□ 2.03
C9orf40-201ENST00000376854 DNAJC21Q5F1R6 531 aaKnown RBP27.7■■■□□ 2.03
C9orf40-201ENST00000376854 SH3BP5LQ7L8J4 393 aa27.7■■■□□ 2.03
C9orf40-201ENST00000376854 CCDC43Q96MW1 224 aaKnown RBP27.7■■■□□ 2.03
C9orf40-201ENST00000376854 ZNF219Q9P2Y4 722 aaPredicted RBP27.7■■■□□ 2.03
C9orf40-201ENST00000376854 ICA1Q05084 483 aa27.7■■■□□ 2.02
C9orf40-201ENST00000376854 SIAH1Q8IUQ4 282 aa27.7■■■□□ 2.02
C9orf40-201ENST00000376854 FAM20AQ96MK3 541 aa27.7■■■□□ 2.02
C9orf40-201ENST00000376854 ZDHHC15Q96MV8 337 aa27.7■■■□□ 2.02
C9orf40-201ENST00000376854 FAM198AQ9UFP1 575 aa27.7■■■□□ 2.02
C9orf40-201ENST00000376854 SREBF1P36956 1147 aa27.69■■■□□ 2.02
C9orf40-201ENST00000376854 RBM5P52756 815 aaKnown RBP eCLIP27.69■■■□□ 2.02
C9orf40-201ENST00000376854 TNNC1P63316 161 aa27.69■■■□□ 2.02
C9orf40-201ENST00000376854 FBXO11Q86XK2 927 aa27.69■■■□□ 2.02
C9orf40-201ENST00000376854 CASKIN2Q8WXE0 1202 aa27.69■■■□□ 2.02
C9orf40-201ENST00000376854 PI4KBQ9UBF8 816 aa27.69■■■□□ 2.02
C9orf40-201ENST00000376854 NAGPAQ9UK23 515 aa27.69■■■□□ 2.02
C9orf40-201ENST00000376854 STK24Q9Y6E0 443 aa27.69■■■□□ 2.02
C9orf40-201ENST00000376854 SIPA1L1O43166 1804 aa27.69■■■□□ 2.02
C9orf40-201ENST00000376854 RSPH10B2B2RC85 870 aa27.69■■■□□ 2.02
C9orf40-201ENST00000376854 KCNK3O14649 394 aa27.69■■■□□ 2.02
C9orf40-201ENST00000376854 RSPH10BP0C881 870 aa27.69■■■□□ 2.02
C9orf40-201ENST00000376854 GNGT1P63211 74 aa27.69■■■□□ 2.02
C9orf40-201ENST00000376854 CYP4A11Q02928 519 aa27.69■■■□□ 2.02
C9orf40-201ENST00000376854 CFAP58Q5T655 872 aa27.69■■■□□ 2.02
C9orf40-201ENST00000376854 RBM46Q8TBY0 533 aaKnown RBP27.69■■■□□ 2.02
C9orf40-201ENST00000376854 TYW1Q9NV66 732 aaKnown RBP27.69■■■□□ 2.02
C9orf40-201ENST00000376854 F5H6K3 240 aa27.68■■■□□ 2.02
C9orf40-201ENST00000376854 CES2O00748 559 aa27.68■■■□□ 2.02
C9orf40-201ENST00000376854 NR3C1P04150 777 aa27.68■■■□□ 2.02
C9orf40-201ENST00000376854 NOP2P46087 812 aaKnown RBP27.68■■■□□ 2.02
C9orf40-201ENST00000376854 KLRC3Q07444 240 aa27.68■■■□□ 2.02
C9orf40-201ENST00000376854 IKQ13123 557 aaPredicted RBP27.68■■■□□ 2.02
C9orf40-201ENST00000376854 EPHA7Q15375 998 aa27.68■■■□□ 2.02
C9orf40-201ENST00000376854 TCERG1LQ5VWI1 586 aa27.68■■■□□ 2.02
C9orf40-201ENST00000376854 IQCKQ8N0W5 287 aa27.68■■■□□ 2.02
C9orf40-201ENST00000376854 TMX4Q9H1E5 349 aaPredicted RBP27.68■■■□□ 2.02
C9orf40-201ENST00000376854 BHMT2Q9H2M3 363 aa27.68■■■□□ 2.02
C9orf40-201ENST00000376854 FOSP01100 380 aaPredicted RBP27.68■■■□□ 2.02
C9orf40-201ENST00000376854 KRT14P02533 472 aa27.68■■■□□ 2.02
C9orf40-201ENST00000376854 GUCY2FP51841 1108 aa27.68■■■□□ 2.02
C9orf40-201ENST00000376854 IFI16Q16666 785 aaKnown RBP27.68■■■□□ 2.02
C9orf40-201ENST00000376854 ALKBH5Q6P6C2 394 aaKnown RBP27.68■■■□□ 2.02
C9orf40-201ENST00000376854 KLHL7Q8IXQ5 586 aa27.68■■■□□ 2.02
C9orf40-201ENST00000376854 METTL14Q9HCE5 456 aaKnown RBP27.68■■■□□ 2.02
C9orf40-201ENST00000376854 ASTN1O14525 1302 aa27.67■■■□□ 2.02
C9orf40-201ENST00000376854 GRIN2DO15399 1336 aa27.67■■■□□ 2.02
C9orf40-201ENST00000376854 EIF3HO15372 352 aaKnown RBP eCLIP27.67■■■□□ 2.02
C9orf40-201ENST00000376854 MSH4O15457 936 aa27.67■■■□□ 2.02
C9orf40-201ENST00000376854 RAD51CO43502 376 aa27.67■■■□□ 2.02
C9orf40-201ENST00000376854 KIF4AO95239 1232 aa27.67■■■□□ 2.02
C9orf40-201ENST00000376854 GCNT3O95395 438 aa27.67■■■□□ 2.02
C9orf40-201ENST00000376854 RPL13P26373 211 aaKnown RBP27.67■■■□□ 2.02
C9orf40-201ENST00000376854 CORO7P57737 925 aa27.67■■■□□ 2.02
C9orf40-201ENST00000376854 BMT2Q1RMZ1 405 aa27.67■■■□□ 2.02
C9orf40-201ENST00000376854 RUSC1Q9BVN2 902 aa27.67■■■□□ 2.02
C9orf40-201ENST00000376854 TMEM59LQ9UK28 342 aa27.67■■■□□ 2.02
C9orf40-201ENST00000376854 ANKRD65E5RJM6 399 aa27.67■■■□□ 2.02
C9orf40-201ENST00000376854 TBCAO75347 108 aaKnown RBP27.67■■■□□ 2.02
C9orf40-201ENST00000376854 PRKCIP41743 596 aa27.67■■■□□ 2.02
C9orf40-201ENST00000376854 PODNQ7Z5L7 613 aa27.67■■■□□ 2.02
C9orf40-201ENST00000376854 DNAAF5Q86Y56 855 aa27.67■■■□□ 2.02
C9orf40-201ENST00000376854 MREGQ8N565 214 aa27.67■■■□□ 2.02
C9orf40-201ENST00000376854 GOLPH3Q9H4A6 298 aa27.67■■■□□ 2.02
C9orf40-201ENST00000376854 POLD4Q9HCU8 107 aa27.67■■■□□ 2.02
C9orf40-201ENST00000376854 SLC16A3O15427 465 aaKnown RBP27.66■■■□□ 2.02
C9orf40-201ENST00000376854 FLOT1O75955 427 aa27.66■■■□□ 2.02
C9orf40-201ENST00000376854 CLSTN1O94985 981 aa27.66■■■□□ 2.02
C9orf40-201ENST00000376854 CASP4P49662 377 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms