RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 RBM46Q8TBY0 533 aaKnown RBP11.71□□□□□ -0.54
ABCF1-202ENST00000376545 ACTRT1Q8TDG2 376 aa11.71□□□□□ -0.54
ABCF1-202ENST00000376545 GMCL1Q96IK5 515 aa11.71□□□□□ -0.54
ABCF1-202ENST00000376545 POLR3CQ9BUI4 534 aaPredicted RBP11.71□□□□□ -0.54
ABCF1-202ENST00000376545 ASTN1O14525 1302 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 FAM86B1E9PN63 330 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 MPHOSPH10O00566 681 aaKnown RBP11.7□□□□□ -0.54
ABCF1-202ENST00000376545 FTCDO95954 541 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 FAM86B2P0C5J1 330 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 SLURP2P0DP57 97 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 SLC9A1P19634 815 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 SLC15A2Q16348 729 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 SLFN13Q68D06 897 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 OLIG1Q8TAK6 271 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 ARL8AQ96BM9 186 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 ZC3H12CQ9C0D7 883 aaKnown RBP11.7□□□□□ -0.54
ABCF1-202ENST00000376545 TYW1Q9NV66 732 aaKnown RBP11.7□□□□□ -0.54
ABCF1-202ENST00000376545 ARMCX3Q9UH62 379 aaPredicted RBP11.7□□□□□ -0.54
ABCF1-202ENST00000376545 NAGPAQ9UK23 515 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 DNM3Q9UQ16 869 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 SLX4Q8IY92 1834 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 SPATA31A6Q5VVP1 1343 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 A0A0A6YYK5 440 aaPredicted RBP11.7□□□□□ -0.54
ABCF1-202ENST00000376545 OPLAHO14841 1288 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 EIF3HO15372 352 aaKnown RBP eCLIP11.7□□□□□ -0.54
ABCF1-202ENST00000376545 HEXIM1O94992 359 aaKnown RBP11.7□□□□□ -0.54
ABCF1-202ENST00000376545 FOSP01100 380 aaPredicted RBP11.7□□□□□ -0.54
ABCF1-202ENST00000376545 FAM153BP0C7A2 387 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 ACTN1P12814 892 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 CRKP46108 304 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 SCNN1DP51172 638 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 PAK2Q13177 524 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 FAM153CQ494X1 144 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 BTNL9Q6UXG8 535 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 SH3BP5LQ7L8J4 393 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 SFR1Q86XK3 245 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 ERMNQ8TAM6 284 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 CASKIN2Q8WXE0 1202 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 CAPS2Q9BXY5 557 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 EPB41L5Q9HCM4 733 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 OLFML3Q9NRN5 406 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 FAM198AQ9UFP1 575 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 FAM153AQ9UHL3 310 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 INTUQ9ULD6 942 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 STXBP5LQ9Y2K9 1186 aa11.7□□□□□ -0.54
ABCF1-202ENST00000376545 CALUO43852 315 aaPredicted RBP11.69□□□□□ -0.54
ABCF1-202ENST00000376545 HSF2BPO75031 334 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 AKAP3O75969 853 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 MAGEA9P43362 315 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 WHAMMQ8TF30 809 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 PBKQ96KB5 322 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 AMNQ9BXJ7 453 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 METTL14Q9HCE5 456 aaKnown RBP11.69□□□□□ -0.54
ABCF1-202ENST00000376545 SCN9AQ15858 1988 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 ZNF233A6NK53 670 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 PIK3CDO00329 1044 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 KIF4AO95239 1232 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 ECHS1P30084 290 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 NAP1L1P55209 391 aaKnown RBP11.69□□□□□ -0.54
ABCF1-202ENST00000376545 HDLBPQ00341 1268 aaKnown RBP11.69□□□□□ -0.54
ABCF1-202ENST00000376545 EXOC3L4Q17RC7 722 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 SHROOM1Q2M3G4 852 aaPredicted RBP11.69□□□□□ -0.54
ABCF1-202ENST00000376545 RASGEF1CQ8N431 466 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 SLC35C1Q96A29 364 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 CALR3Q96L12 384 aaKnown RBP11.69□□□□□ -0.54
ABCF1-202ENST00000376545 PI4KBQ9UBF8 816 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 RSPH14Q9UHP6 348 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 NFU1Q9UMS0 254 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 LOXHD1Q8IVV2 1947 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 DDTLA6NHG4 134 aaPredicted RBP11.69□□□□□ -0.54
ABCF1-202ENST00000376545 MSH4O15457 936 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 NPEPPSP55786 919 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 CERKLQ49MI3 558 aaPredicted RBP11.69□□□□□ -0.54
ABCF1-202ENST00000376545 PRR16Q569H4 304 aa11.69□□□□□ -0.54
ABCF1-202ENST00000376545 DNAJC21Q5F1R6 531 aaKnown RBP11.69□□□□□ -0.54
ABCF1-202ENST00000376545 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.69□□□□□ -0.54
ABCF1-202ENST00000376545 COL2A1P02458 1487 aaPredicted RBP11.68□□□□□ -0.54
ABCF1-202ENST00000376545 ZMYM2Q9UBW7 1377 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 ZSCAN5CA6NGD5 496 aaPredicted RBP11.68□□□□□ -0.54
ABCF1-202ENST00000376545 EIF3DO15371 548 aaKnown RBP eCLIP11.68□□□□□ -0.54
ABCF1-202ENST00000376545 EYA4O95677 639 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 XRCC5P13010 732 aaKnown RBP11.68□□□□□ -0.54
ABCF1-202ENST00000376545 HSPA9P38646 679 aaKnown RBP11.68□□□□□ -0.54
ABCF1-202ENST00000376545 GUCY2DQ02846 1103 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 IFI16Q16666 785 aaKnown RBP11.68□□□□□ -0.54
ABCF1-202ENST00000376545 C10orf67Q8IYJ2 551 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 SLC30A5Q8TAD4 765 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 KRT12Q99456 494 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 ISCUQ9H1K1 167 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 AJAP1Q9UKB5 411 aaPredicted RBP11.68□□□□□ -0.54
ABCF1-202ENST00000376545 SYNPO2Q9UMS6 1093 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 PACSIN2Q9UNF0 486 aaPredicted RBP11.68□□□□□ -0.54
ABCF1-202ENST00000376545 IGLV3-22A0A075B6J6 115 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 TGFB1I1O43294 461 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 RAD51CO43502 376 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 ZEB2O60315 1214 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 GFPT2O94808 682 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 CPP00450 1065 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 NR3C1P04150 777 aa11.68□□□□□ -0.54
ABCF1-202ENST00000376545 KRT18P05783 430 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms