RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 NONOQ15233 471 aaKnown RBP eCLIP12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 PTPAQ15257 358 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 STXBP2Q15833 593 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 DGKDQ16760 1214 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 KIAA0753Q2KHM9 967 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 TRIM71Q2Q1W2 868 aaKnown RBP12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 TTC38Q5R3I4 469 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 ARHGEF16Q5VV41 709 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 JAKMIP3Q5VZ66 844 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 TEX2Q8IWB9 1127 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 RASGRP4Q8TDF6 673 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 PGBD1Q96JS3 809 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 TGS1Q96RS0 853 aaKnown RBP12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 UBE2ZQ9H832 354 aaPredicted RBP12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 SUGCTQ9HAC7 445 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 PCDHA7Q9UN72 937 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 MRPL11Q9Y3B7 192 aaKnown RBP12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 PCDHB6Q9Y5E3 794 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 MRVI1Q9Y6F6 885 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 PIEZO1Q92508 2521 aa12.36□□□□□ -0.43
HLA-DQA1-202ENST00000374949 ABHD14A-ACY1A0A1B0GW23 586 aa12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 ERVK-21P61565 698 aa12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 PTK7Q13308 1070 aa12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 HIC1Q14526 733 aa12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 ZNF174Q15697 407 aa12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 TPRNQ4KMQ1 711 aa12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 ZNF618Q5T7W0 954 aa12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 ADALQ6DHV7 355 aa12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 PPTC7Q8NI37 304 aa12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 EMID1Q96A84 441 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 IWS1Q96ST2 819 aa12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 RAD9AQ99638 391 aa12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 KATNAL1Q9BW62 490 aa12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 PXMP2Q9NR77 195 aa12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 TMEM260Q9NX78 707 aa12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 LMCD1Q9NZU5 365 aa12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 DDX41Q9UJV9 622 aaKnown RBP12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 MORC2Q9Y6X9 1032 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 NLRC5Q86WI3 1866 aa12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 ATG2AQ2TAZ0 1938 aa12.35□□□□□ -0.43
HLA-DQA1-202ENST00000374949 HAS3O00219 553 aa12.34□□□□□ -0.43
HLA-DQA1-202ENST00000374949 OPLAHO14841 1288 aa12.34□□□□□ -0.43
HLA-DQA1-202ENST00000374949 PARNO95453 639 aaKnown RBP12.34□□□□□ -0.43
HLA-DQA1-202ENST00000374949 CFBP00751 764 aa12.34□□□□□ -0.43
HLA-DQA1-202ENST00000374949 FOSP01100 380 aaPredicted RBP12.34□□□□□ -0.43
HLA-DQA1-202ENST00000374949 NR3C2P08235 984 aa12.34□□□□□ -0.43
HLA-DQA1-202ENST00000374949 KCNA5P22460 613 aa12.34□□□□□ -0.43
HLA-DQA1-202ENST00000374949 CLK2P49760 499 aaKnown RBP12.34□□□□□ -0.43
HLA-DQA1-202ENST00000374949 IKBKEQ14164 716 aa12.34□□□□□ -0.43
HLA-DQA1-202ENST00000374949 INF2Q27J81 1249 aa12.34□□□□□ -0.43
HLA-DQA1-202ENST00000374949 MCF2L2Q86YR7 1114 aa12.34□□□□□ -0.43
HLA-DQA1-202ENST00000374949 DHX37Q8IY37 1157 aaKnown RBP12.34□□□□□ -0.43
HLA-DQA1-202ENST00000374949 C17orf80Q9BSJ5 609 aa12.34□□□□□ -0.43
HLA-DQA1-202ENST00000374949 TCHHQ07283 1943 aa12.34□□□□□ -0.43
HLA-DQA1-202ENST00000374949 DOCK5Q9H7D0 1870 aa12.34□□□□□ -0.43
HLA-DQA1-202ENST00000374949 A0A1W2PQ27 194 aa12.33□□□□□ -0.44
HLA-DQA1-202ENST00000374949 A0A1W2PQ64 194 aa12.33□□□□□ -0.44
HLA-DQA1-202ENST00000374949 A0A1W2PQD8 194 aa12.33□□□□□ -0.44
HLA-DQA1-202ENST00000374949 MEIS2O14770 477 aa12.33□□□□□ -0.44
HLA-DQA1-202ENST00000374949 CUTAO60888 179 aa12.33□□□□□ -0.44
HLA-DQA1-202ENST00000374949 LGR5O75473 907 aa12.33□□□□□ -0.44
HLA-DQA1-202ENST00000374949 EIF3JO75822 258 aaKnown RBP12.33□□□□□ -0.44
HLA-DQA1-202ENST00000374949 RGS20O76081 388 aa12.33□□□□□ -0.44
HLA-DQA1-202ENST00000374949 MYCLP12524 364 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQA1-202ENST00000374949 IL9P15248 144 aa12.33□□□□□ -0.44
HLA-DQA1-202ENST00000374949 MARCKSP29966 332 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQA1-202ENST00000374949 UBE2SQ16763 222 aa12.33□□□□□ -0.44
HLA-DQA1-202ENST00000374949 USP17L6PQ6QN14 398 aa12.33□□□□□ -0.44
HLA-DQA1-202ENST00000374949 MYOCDQ8IZQ8 938 aa12.33□□□□□ -0.44
HLA-DQA1-202ENST00000374949 FBXO22Q8NEZ5 403 aa12.33□□□□□ -0.44
HLA-DQA1-202ENST00000374949 IL31RAQ8NI17 732 aa12.33□□□□□ -0.44
HLA-DQA1-202ENST00000374949 TBCKQ8TEA7 893 aa12.33□□□□□ -0.44
HLA-DQA1-202ENST00000374949 GCOM1H8Y6P7 765 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 PIK3CDO00329 1044 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 GPR37L1O60883 481 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 EFCAB14O75071 495 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 GGPS1O95749 300 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 AMHP03971 560 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 POLR2MP0CAP2 368 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 HOXD8P13378 290 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 UBA1P22314 1058 aaKnown RBP12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 CMA1P23946 247 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 MCM7P33993 719 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 THPOP40225 353 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 HSD17B4P51659 736 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 PTGDRQ13258 359 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 AP3B2Q13367 1082 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 ORC2Q13416 577 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 MKRN4PQ13434 485 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 LAMC2Q13753 1193 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 HSDL1Q3SXM5 330 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 LEXMQ3ZCV2 418 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 AXDND1Q5T1B0 1012 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 NEK8Q86SG6 692 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 SAMD3Q8N6K7 520 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 KRI1Q8N9T8 703 aaKnown RBP12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 DBF4BQ8NFT6 615 aa12.32□□□□□ -0.44
HLA-DQA1-202ENST00000374949 SYAP1Q96A49 352 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms