RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 PCDHA4Q9UN74 947 aa8.96□□□□□ -0.97
GARNL3-201ENST00000373386 LEMD3Q9Y2U8 911 aa8.96□□□□□ -0.97
GARNL3-201ENST00000373386 LUC7L2Q9Y383 392 aaKnown RBP8.96□□□□□ -0.97
GARNL3-201ENST00000373386 TARSL2A2RTX5 802 aaKnown RBP8.96□□□□□ -0.98
GARNL3-201ENST00000373386 USP17L12C9JPN9 530 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 USP17L21D6R901 530 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 TBC1D12O60347 775 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 PTGDRQ13258 359 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 MAP7Q14244 749 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 EARS2Q5JPH6 523 aaKnown RBP8.96□□□□□ -0.98
GARNL3-201ENST00000373386 FKBP15Q5T1M5 1219 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 POTEEQ6S8J3 1075 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 SLC15A3Q8IY34 581 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 WDR66Q8TBY9 1149 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 ACMSDQ8TDX5 336 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 FRS2Q8WU20 508 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 AK8Q96MA6 479 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 CCSER1Q9C0I3 900 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 ZHX3Q9H4I2 956 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 ZNF287Q9HBT7 754 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 GJA3Q9Y6H8 435 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 LRRC37AA6NMS7 1700 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 TAF1P21675 1872 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 MYH1P12882 1939 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 MYH8P13535 1937 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 A0A1W2PQC6 194 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 CTAGE15A4D2H0 777 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 H7C1D1 291 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 hCG_1984214I3L0E3 225 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 TTI1O43156 1089 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 SMNDC1O75940 238 aaKnown RBP eCLIP8.96□□□□□ -0.98
GARNL3-201ENST00000373386 CTAGE8P0CG41 777 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 CASP14P31944 242 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 SLC8A1P32418 973 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 NOVP48745 357 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 DYNLL1P63167 89 aaKnown RBP8.96□□□□□ -0.98
GARNL3-201ENST00000373386 C12orf60Q5U649 245 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 CCDC121Q6ZUS5 278 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 C14orf80Q86SX3 495 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 CTAGE6Q86UF2 777 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 CTAGE4Q8IX94 777 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 ZNF713Q8N859 430 aaPredicted RBP8.96□□□□□ -0.98
GARNL3-201ENST00000373386 PPP1R14BQ96C90 147 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 C8orf37Q96NL8 207 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 PDE11AQ9HCR9 933 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 DDX20Q9UHI6 824 aaKnown RBP8.96□□□□□ -0.98
GARNL3-201ENST00000373386 L1RE1Q9UN81 338 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 XDHP47989 1333 aa8.96□□□□□ -0.98
GARNL3-201ENST00000373386 ATXN2Q99700 1313 aaKnown RBP8.96□□□□□ -0.98
GARNL3-201ENST00000373386 HOXA2O43364 376 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 CD44P16070 742 aaKnown RBP8.95□□□□□ -0.98
GARNL3-201ENST00000373386 FOXR2Q6PJQ5 311 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 CYP26C1Q6V0L0 522 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 C3orf67Q6ZVT6 689 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 USP49Q70CQ1 688 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 BLIDQ8IZY5 108 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 SLC35F6Q8N357 371 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 CPLX3Q8WVH0 158 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 ANKRD49Q8WVL7 239 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 QTRT2Q9H974 415 aaKnown RBP8.95□□□□□ -0.98
GARNL3-201ENST00000373386 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.95□□□□□ -0.98
GARNL3-201ENST00000373386 VPS18Q9P253 973 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 DDX25Q9UHL0 483 aaKnown RBP8.95□□□□□ -0.98
GARNL3-201ENST00000373386 TIMM22Q9Y584 194 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 CAPN7Q9Y6W3 813 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 QSER1Q2KHR3 1735 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 GYPCP04921 128 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 PDGFRBP09619 1106 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 EEF1GP26641 437 aaKnown RBP8.95□□□□□ -0.98
GARNL3-201ENST00000373386 S100A5P33763 92 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 AFMP43652 599 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 PPIDQ08752 370 aaKnown RBP8.95□□□□□ -0.98
GARNL3-201ENST00000373386 PAK1Q13153 545 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 BOLA3Q53S33 107 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 C11orf74Q86VG3 221 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 CEP57Q86XR8 500 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 APLFQ8IW19 511 aaPredicted RBP8.95□□□□□ -0.98
GARNL3-201ENST00000373386 KIRREL3Q8IZU9 778 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 LILRB2Q8N423 598 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 FAM71BQ8TC56 605 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 CELF1Q92879 486 aaKnown RBP8.95□□□□□ -0.98
GARNL3-201ENST00000373386 ATP6V0A1Q93050 837 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 PPP2R3CQ969Q6 453 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 PNKPQ96T60 521 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 TBK1Q9UHD2 729 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 FAM169AQ9Y6X4 670 aa8.95□□□□□ -0.98
GARNL3-201ENST00000373386 SPATA31A6Q5VVP1 1343 aa8.94□□□□□ -0.98
GARNL3-201ENST00000373386 hCG_2014768A0A024R1R8 64 aa8.94□□□□□ -0.98
GARNL3-201ENST00000373386 GFPT2O94808 682 aa8.94□□□□□ -0.98
GARNL3-201ENST00000373386 TMCC1O94876 653 aa8.94□□□□□ -0.98
GARNL3-201ENST00000373386 TM4SF1P30408 202 aa8.94□□□□□ -0.98
GARNL3-201ENST00000373386 STX17P56962 302 aa8.94□□□□□ -0.98
GARNL3-201ENST00000373386 NLRP5P59047 1200 aa8.94□□□□□ -0.98
GARNL3-201ENST00000373386 IGBP1P78318 339 aa8.94□□□□□ -0.98
GARNL3-201ENST00000373386 TPTE2Q6XPS3 522 aa8.94□□□□□ -0.98
GARNL3-201ENST00000373386 CMTR1Q8N1G2 835 aaKnown RBP8.94□□□□□ -0.98
GARNL3-201ENST00000373386 NR1H4Q96RI1 486 aaPredicted RBP8.94□□□□□ -0.98
GARNL3-201ENST00000373386 SPZ1Q9BXG8 430 aa8.94□□□□□ -0.98
GARNL3-201ENST00000373386 THAP9Q9H5L6 903 aa8.94□□□□□ -0.98
GARNL3-201ENST00000373386 ABCB6Q9NP58 842 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms