RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 SCFD1Q8WVM8 642 aa14.94□□□□□ -0.02
USP49-201ENST00000373006 HVCN1Q96D96 273 aa14.94□□□□□ -0.02
USP49-201ENST00000373006 GOPCQ9HD26 462 aa14.94□□□□□ -0.02
USP49-201ENST00000373006 BMP2KQ9NSY1 1161 aaPredicted RBP14.94□□□□□ -0.02
USP49-201ENST00000373006 PNMA2Q9UL42 364 aa14.94□□□□□ -0.02
USP49-201ENST00000373006 ZNF652Q9Y2D9 606 aa14.94□□□□□ -0.02
USP49-201ENST00000373006 TLDC2A0PJX2 215 aa14.93□□□□□ -0.02
USP49-201ENST00000373006 PRPF4BQ13523 1007 aaKnown RBP14.93□□□□□ -0.02
USP49-201ENST00000373006 EGFL6Q8IUX8 553 aa14.93□□□□□ -0.02
USP49-201ENST00000373006 TATDN2Q93075 761 aa14.93□□□□□ -0.02
USP49-201ENST00000373006 EMILIN3Q9NT22 766 aa14.93□□□□□ -0.02
USP49-201ENST00000373006 CCDC189A1A4V9 331 aa14.93□□□□□ -0.02
USP49-201ENST00000373006 CTNND1O60716 968 aaKnown RBP14.93□□□□□ -0.02
USP49-201ENST00000373006 UCHL3P15374 230 aa14.93□□□□□ -0.02
USP49-201ENST00000373006 CDK8P49336 464 aa14.93□□□□□ -0.02
USP49-201ENST00000373006 PDIA5Q14554 519 aa14.93□□□□□ -0.02
USP49-201ENST00000373006 TPCN2Q8NHX9 752 aa14.93□□□□□ -0.02
USP49-201ENST00000373006 RBM46Q8TBY0 533 aaKnown RBP14.93□□□□□ -0.02
USP49-201ENST00000373006 MIEF2Q96C03 454 aa14.93□□□□□ -0.02
USP49-201ENST00000373006 SRRM3A6NNA2 597 aaPredicted RBP14.93□□□□□ -0.02
USP49-201ENST00000373006 ENO4A6NNW6 628 aa14.93□□□□□ -0.02
USP49-201ENST00000373006 F8W031 263 aaPredicted RBP14.93□□□□□ -0.02
USP49-201ENST00000373006 CAND2O75155 1236 aa14.93□□□□□ -0.02
USP49-201ENST00000373006 NR2F2P24468 414 aa14.93□□□□□ -0.02
USP49-201ENST00000373006 TMEM119Q4V9L6 283 aa14.93□□□□□ -0.02
USP49-201ENST00000373006 DCAF17Q5H9S7 520 aaPredicted RBP14.93□□□□□ -0.02
USP49-201ENST00000373006 GJB7Q6PEY0 223 aa14.93□□□□□ -0.02
USP49-201ENST00000373006 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.93□□□□□ -0.026e-6■■■■■ 28.1
USP49-201ENST00000373006 PSMD1Q99460 953 aa14.93□□□□□ -0.02
USP49-201ENST00000373006 PLCD4Q9BRC7 762 aa14.93□□□□□ -0.02
USP49-201ENST00000373006 SRP68Q9UHB9 627 aaKnown RBP14.93□□□□□ -0.02
USP49-201ENST00000373006 F8VZ95 297 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 UPP2O95045 317 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 SHBGP04278 402 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 KRT18P05783 430 aaKnown RBP14.92□□□□□ -0.02
USP49-201ENST00000373006 ADCY7P51828 1080 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 TCERG1LQ5VWI1 586 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 HAS1Q92839 578 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 CEP63Q96MT8 703 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 LRRC27Q9C0I9 530 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 ANKIB1Q9P2G1 1089 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 HDAC9Q9UKV0 1011 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 FGGP02679 453 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 CASP5P51878 434 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 WLSQ5T9L3 541 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 ARMC3Q5W041 872 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 TBC1D9BQ66K14 1250 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 ARHGAP27Q6ZUM4 889 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 GPBP1Q86WP2 473 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 UHMK1Q8TAS1 419 aaKnown RBP14.92□□□□□ -0.02
USP49-201ENST00000373006 CCT6BQ92526 530 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 GPCPD1Q9NPB8 672 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 DDX25Q9UHL0 483 aaKnown RBP14.92□□□□□ -0.02
USP49-201ENST00000373006 PCDHA12Q9UN75 941 aa14.92□□□□□ -0.02
USP49-201ENST00000373006 DRD4P21917 467 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 MTMR3Q13615 1198 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 PPP1R7Q15435 360 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 AGBL2Q5U5Z8 902 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 HIBCHQ6NVY1 386 aaPredicted RBP14.91□□□□□ -0.02
USP49-201ENST00000373006 CLEC10AQ8IUN9 316 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 MARCH10Q8NA82 808 aaPredicted RBP14.91□□□□□ -0.02
USP49-201ENST00000373006 SELENOSQ9BQE4 189 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 KCTD10Q9H3F6 313 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 OSGEPQ9NPF4 335 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 BAIAP2L1Q9UHR4 511 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 AJAP1Q9UKB5 411 aaPredicted RBP14.91□□□□□ -0.02
USP49-201ENST00000373006 UTP11Q9Y3A2 253 aaKnown RBP14.91□□□□□ -0.02
USP49-201ENST00000373006 POTEB3A0JP26 581 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 POTECB2RU33 542 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 CETN3O15182 167 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 POTEBQ6S5H4 581 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 LRRC47Q8N1G4 583 aaKnown RBP14.91□□□□□ -0.02
USP49-201ENST00000373006 CCDC26Q8TAB7 109 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 U2AF1L4Q8WU68 220 aaKnown RBP14.91□□□□□ -0.02
USP49-201ENST00000373006 GNA14O95837 355 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 PLA2G4BP0C869 781 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 SPTY2D1Q68D10 685 aaPredicted RBP14.91□□□□□ -0.02
USP49-201ENST00000373006 NBPF5PQ86XG9 351 aaPredicted RBP14.91□□□□□ -0.02
USP49-201ENST00000373006 CCDC65Q8IXS2 484 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 EIF1ADQ8N9N8 165 aaKnown RBP14.91□□□□□ -0.02
USP49-201ENST00000373006 GLG1Q92896 1179 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 CHMP6Q96FZ7 201 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 NLRP3Q96P20 1036 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 PCDHA2Q9Y5H9 948 aa14.91□□□□□ -0.02
USP49-201ENST00000373006 C5orf60A6NFR6 353 aa14.9□□□□□ -0.02
USP49-201ENST00000373006 CES2O00748 559 aa14.9□□□□□ -0.02
USP49-201ENST00000373006 BAG3O95817 575 aa14.9□□□□□ -0.02
USP49-201ENST00000373006 ZBTB48P10074 688 aaPredicted RBP14.9□□□□□ -0.02
USP49-201ENST00000373006 IFI16Q16666 785 aaKnown RBP14.9□□□□□ -0.02
USP49-201ENST00000373006 EXOC3L4Q17RC7 722 aa14.9□□□□□ -0.02
USP49-201ENST00000373006 MSL1Q68DK7 614 aa14.9□□□□□ -0.02
USP49-201ENST00000373006 C8orf37Q96NL8 207 aa14.9□□□□□ -0.02
USP49-201ENST00000373006 XPO6Q96QU8 1125 aaKnown RBP14.9□□□□□ -0.02
USP49-201ENST00000373006 TRIM6Q9C030 488 aaPredicted RBP14.9□□□□□ -0.02
USP49-201ENST00000373006 RREB1Q92766 1687 aa14.9□□□□□ -0.02
USP49-201ENST00000373006 KIAA1551Q9HCM1 1747 aa14.9□□□□□ -0.02
USP49-201ENST00000373006 EZRP15311 586 aaKnown RBP14.9□□□□□ -0.02
USP49-201ENST00000373006 CHN1P15882 459 aa14.9□□□□□ -0.02
USP49-201ENST00000373006 PON1P27169 355 aa14.9□□□□□ -0.02
USP49-201ENST00000373006 TCP11Q8WWU5 503 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms