RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 FUT8Q9BYC5 575 aa18.73■□□□□ 0.59
VEGFA-205ENST00000372067 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.73■□□□□ 0.597e-7■■■□□ 18.3
VEGFA-205ENST00000372067 ZNRF3Q9ULT6 936 aa18.73■□□□□ 0.59
VEGFA-205ENST00000372067 PCDHA13Q9Y5I0 950 aa18.73■□□□□ 0.59
VEGFA-205ENST00000372067 SORBS3O60504 671 aa18.72■□□□□ 0.59
VEGFA-205ENST00000372067 WHAMMP3Q1A5X7 153 aa18.72■□□□□ 0.59
VEGFA-205ENST00000372067 P2RX7Q99572 595 aaKnown RBP18.72■□□□□ 0.59
VEGFA-205ENST00000372067 REXO2Q9Y3B8 237 aaKnown RBP18.72■□□□□ 0.59
VEGFA-205ENST00000372067 EML1O00423 815 aa18.72■□□□□ 0.59
VEGFA-205ENST00000372067 ZBTB39O15060 712 aa18.72■□□□□ 0.59
VEGFA-205ENST00000372067 RPL13P26373 211 aaKnown RBP18.72■□□□□ 0.59
VEGFA-205ENST00000372067 SREBF1P36956 1147 aa18.72■□□□□ 0.59
VEGFA-205ENST00000372067 MRPS25P82663 173 aaKnown RBP18.72■□□□□ 0.59
VEGFA-205ENST00000372067 RASA3Q14644 834 aa18.72■□□□□ 0.59
VEGFA-205ENST00000372067 CCDC170Q8IYT3 715 aa18.72■□□□□ 0.59
VEGFA-205ENST00000372067 FAM133AQ8N9E0 248 aa18.72■□□□□ 0.59
VEGFA-205ENST00000372067 MTMR8Q96EF0 704 aa18.72■□□□□ 0.59
VEGFA-205ENST00000372067 KCNMB3Q9NPA1 279 aa18.72■□□□□ 0.59
VEGFA-205ENST00000372067 SHTN1A0MZ66 631 aa18.71■□□□□ 0.59
VEGFA-205ENST00000372067 IVLP07476 585 aa18.71■□□□□ 0.59
VEGFA-205ENST00000372067 XRCC5P13010 732 aaKnown RBP18.71■□□□□ 0.59
VEGFA-205ENST00000372067 FKBP1AP62942 108 aaKnown RBP18.71■□□□□ 0.59
VEGFA-205ENST00000372067 ASIC2Q16515 512 aa18.71■□□□□ 0.59
VEGFA-205ENST00000372067 HS2ST1Q7LGA3 356 aa18.71■□□□□ 0.59
VEGFA-205ENST00000372067 SCFD1Q8WVM8 642 aa18.71■□□□□ 0.59
VEGFA-205ENST00000372067 VCPKMTQ9H867 229 aa18.71■□□□□ 0.59
VEGFA-205ENST00000372067 RAVER2Q9HCJ3 691 aaKnown RBP18.71■□□□□ 0.59
VEGFA-205ENST00000372067 MYO1AQ9UBC5 1043 aa18.71■□□□□ 0.59
VEGFA-205ENST00000372067 DLEC1Q9Y238 1755 aa18.71■□□□□ 0.59
VEGFA-205ENST00000372067 NMT1P30419 496 aaKnown RBP18.71■□□□□ 0.59
VEGFA-205ENST00000372067 NAIF1Q69YI7 327 aaPredicted RBP18.71■□□□□ 0.59
VEGFA-205ENST00000372067 RUSC1Q9BVN2 902 aa18.71■□□□□ 0.59
VEGFA-205ENST00000372067 MYH8P13535 1937 aa18.71■□□□□ 0.59
VEGFA-205ENST00000372067 RPA1P27694 616 aa18.71■□□□□ 0.59
VEGFA-205ENST00000372067 CASP5P51878 434 aa18.71■□□□□ 0.59
VEGFA-205ENST00000372067 KCNH2Q12809 1159 aa18.71■□□□□ 0.59
VEGFA-205ENST00000372067 KIAA1755Q5JYT7 1200 aa18.71■□□□□ 0.59
VEGFA-205ENST00000372067 PRAMEF18Q5VWM3 479 aa18.71■□□□□ 0.59
VEGFA-205ENST00000372067 TADA2BQ86TJ2 420 aa18.71■□□□□ 0.59
VEGFA-205ENST00000372067 TMX2Q9Y320 296 aa18.71■□□□□ 0.59
VEGFA-205ENST00000372067 RPS6KA5O75582 802 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 GNA14O95837 355 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 ASNSP08243 561 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 ACTN1P12814 892 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 EIF2AK2P19525 551 aaKnown RBP18.7■□□□□ 0.58
VEGFA-205ENST00000372067 VAV2P52735 878 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 CXCL9Q07325 125 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 HSP90B2PQ58FF3 399 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 ODR4Q5SWX8 454 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 LEKR1Q6ZMV7 388 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 MIER3Q7Z3K6 550 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 FAM178BQ8IXR5 827 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 TSGA10Q9BZW7 698 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 POTEB2H3BUK9 544 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 ZNF185O15231 689 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 DGKZQ13574 1117 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 LRRC31Q6UY01 552 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 TEKT3Q9BXF9 490 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 BCAS3Q9H6U6 928 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 CKAP4Q07065 602 aaKnown RBP18.7■□□□□ 0.58
VEGFA-205ENST00000372067 LRRC55Q6ZSA7 311 aa18.7■□□□□ 0.58
VEGFA-205ENST00000372067 ZNF526Q8TF50 670 aaPredicted RBP18.7■□□□□ 0.58
VEGFA-205ENST00000372067 PHACTR2O75167 634 aa18.69■□□□□ 0.58
VEGFA-205ENST00000372067 PAFAH1B1P43034 410 aa18.69■□□□□ 0.58
VEGFA-205ENST00000372067 GIT2Q14161 759 aa18.69■□□□□ 0.58
VEGFA-205ENST00000372067 KNOP1Q1ED39 458 aaKnown RBP18.69■□□□□ 0.58
VEGFA-205ENST00000372067 SLC24A3Q9HC58 644 aa18.69■□□□□ 0.58
VEGFA-205ENST00000372067 PIM2Q9P1W9 311 aa18.69■□□□□ 0.58
VEGFA-205ENST00000372067 RCCD1A6NED2 376 aa18.69■□□□□ 0.58
VEGFA-205ENST00000372067 USP8P40818 1118 aa18.69■□□□□ 0.58
VEGFA-205ENST00000372067 ZC2HC1CQ53FD0 456 aaPredicted RBP18.69■□□□□ 0.58
VEGFA-205ENST00000372067 NOA1Q8NC60 698 aaKnown RBP18.69■□□□□ 0.58
VEGFA-205ENST00000372067 ARHGAP20Q9P2F6 1191 aa18.69■□□□□ 0.58
VEGFA-205ENST00000372067 ADAMTS1Q9UHI8 967 aa18.69■□□□□ 0.58
VEGFA-205ENST00000372067 KLHL33A6NCF5 533 aa18.69■□□□□ 0.58
VEGFA-205ENST00000372067 HNRNPH1P31943 449 aaKnown RBP18.69■□□□□ 0.58
VEGFA-205ENST00000372067 MNAT1P51948 309 aa18.69■□□□□ 0.58
VEGFA-205ENST00000372067 TUBB2AQ13885 445 aa18.69■□□□□ 0.58
VEGFA-205ENST00000372067 LONRF2Q1L5Z9 754 aa18.69■□□□□ 0.58
VEGFA-205ENST00000372067 CEP55Q53EZ4 464 aa18.69■□□□□ 0.58
VEGFA-205ENST00000372067 MICALL1Q8N3F8 863 aa18.69■□□□□ 0.58
VEGFA-205ENST00000372067 ETNPPLQ8TBG4 499 aa18.69■□□□□ 0.58
VEGFA-205ENST00000372067 TUBB2BQ9BVA1 445 aa18.69■□□□□ 0.58
VEGFA-205ENST00000372067 TESPA1A2RU30 521 aaPredicted RBP18.68■□□□□ 0.58
VEGFA-205ENST00000372067 ATP8B1O43520 1251 aa18.68■□□□□ 0.58
VEGFA-205ENST00000372067 N4BP1O75113 896 aaKnown RBP18.68■□□□□ 0.58
VEGFA-205ENST00000372067 ARP10275 920 aa18.68■□□□□ 0.58
VEGFA-205ENST00000372067 PLCD4Q9BRC7 762 aa18.68■□□□□ 0.58
VEGFA-205ENST00000372067 TAOK3Q9H2K8 898 aa18.68■□□□□ 0.58
VEGFA-205ENST00000372067 VPS18Q9P253 973 aa18.68■□□□□ 0.58
VEGFA-205ENST00000372067 POLD1P28340 1107 aa18.68■□□□□ 0.58
VEGFA-205ENST00000372067 CAP2P40123 477 aa18.68■□□□□ 0.58
VEGFA-205ENST00000372067 EXOC3L4Q17RC7 722 aa18.68■□□□□ 0.58
VEGFA-205ENST00000372067 ARSHQ5FYA8 562 aa18.68■□□□□ 0.58
VEGFA-205ENST00000372067 FBXW10Q5XX13 1052 aa18.68■□□□□ 0.58
VEGFA-205ENST00000372067 PDXDC1Q6P996 788 aa18.68■□□□□ 0.58
VEGFA-205ENST00000372067 STXBP4Q6ZWJ1 553 aa18.68■□□□□ 0.58
VEGFA-205ENST00000372067 SAMD7Q7Z3H4 446 aa18.68■□□□□ 0.58
VEGFA-205ENST00000372067 FAM160B2Q86V87 743 aa18.68■□□□□ 0.58
VEGFA-205ENST00000372067 CEP63Q96MT8 703 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms