RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 HERC4Q5GLZ8 1057 aaPredicted RBP11.75□□□□□ -0.53
TPM3-212ENST00000368533 MFAP3LO75121 409 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 PGK2P07205 417 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 KRT9P35527 623 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 MTMR1Q13613 665 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 PGM5Q15124 567 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 TSR1Q2NL82 804 aaKnown RBP11.75□□□□□ -0.53
TPM3-212ENST00000368533 ANKRD40Q6AI12 368 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 OTOP1Q7RTM1 612 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 ANKRD35Q8N283 1001 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 PYM1Q9BRP8 204 aaKnown RBP11.75□□□□□ -0.53
TPM3-212ENST00000368533 A1CFQ9NQ94 594 aaKnown RBP11.75□□□□□ -0.53
TPM3-212ENST00000368533 RMND1Q9NWS8 449 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 ADGRG1Q9Y653 693 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 HSD17B4P51659 736 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 COPB1P53618 953 aaKnown RBP11.75□□□□□ -0.53
TPM3-212ENST00000368533 AMPD3Q01432 767 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 GRM1Q13255 1194 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 ITGB3BPQ13352 177 aaPredicted RBP11.75□□□□□ -0.53
TPM3-212ENST00000368533 TMEM119Q4V9L6 283 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 CDKAL1Q5VV42 579 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 MXRA8Q9BRK3 442 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 RUSC1Q9BVN2 902 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 PANK4Q9NVE7 773 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 C19orf81C9J6K1 198 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 GYPCP04921 128 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 GJA5P36382 358 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 TKFCQ3LXA3 575 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 ADSSL1Q8N142 457 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 TXNRD2Q9NNW7 524 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 NMRK2Q9NPI5 230 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 PLA2G6O60733 806 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 CASP5P51878 434 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 SPAG1Q07617 926 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 COASYQ13057 564 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 STIM1Q13586 685 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 ARSHQ5FYA8 562 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 MCF2L2Q86YR7 1114 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 ANKRD13AQ8IZ07 590 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 CSGALNACT2Q8N6G5 542 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 MBOAT7Q96N66 472 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 C7orf25Q9BPX7 421 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 PDCD2LQ9BRP1 358 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 TEX13BQ9BXU2 312 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 PXMP2Q9NR77 195 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 MAGEC2Q9UBF1 373 aaPredicted RBP11.74□□□□□ -0.53
TPM3-212ENST00000368533 SUFUQ9UMX1 484 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 DNM3Q9UQ16 869 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 PPP2R3BQ9Y5P8 575 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 MRFAP1Q9Y605 127 aa11.74□□□□□ -0.53
TPM3-212ENST00000368533 PSMD10O75832 226 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 SLITRK3O94933 977 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 RHOBTB3O94955 611 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 CYP11B2P19099 503 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 CIITAP33076 1130 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 HAUS3Q68CZ6 603 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 SEPT14Q6ZU15 432 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 USP50Q70EL3 339 aaPredicted RBP11.73□□□□□ -0.53
TPM3-212ENST00000368533 APTXQ7Z2E3 356 aaKnown RBP11.73□□□□□ -0.53
TPM3-212ENST00000368533 GIMAP8Q8ND71 665 aaPredicted RBP11.73□□□□□ -0.53
TPM3-212ENST00000368533 REPS2Q8NFH8 660 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 GOLGA1Q92805 767 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 TCEAL9Q9UHQ7 104 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 RWDD2AQ9UIY3 292 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 PITPNM2Q9BZ72 1349 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 PSMA7O14818 248 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 LIG3P49916 1009 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 Q3C1V9 767 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 TCP11X2Q5H9J9 407 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 ERMNQ8TAM6 284 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 NOC3LQ8WTT2 800 aaKnown RBP11.73□□□□□ -0.53
TPM3-212ENST00000368533 CCDC47Q96A33 483 aaKnown RBP11.73□□□□□ -0.53
TPM3-212ENST00000368533 DNAJC19Q96DA6 116 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 FAM20AQ96MK3 541 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 REEP2Q9BRK0 252 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 LXNQ9BS40 222 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 NAA15Q9BXJ9 866 aaKnown RBP11.73□□□□□ -0.53
TPM3-212ENST00000368533 ASCC2Q9H1I8 757 aaPredicted RBP11.73□□□□□ -0.53
TPM3-212ENST00000368533 EHMT1Q9H9B1 1298 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 STK17AQ9UEE5 414 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 GUCA1BQ9UMX6 200 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 CTAGE9A4FU28 777 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 NR3C2P08235 984 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 CYP3A4P08684 503 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 MNAT1P51948 309 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 CHMP4BP1P59074 171 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 KCNA1Q09470 495 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 ORC2Q13416 577 aaPredicted RBP11.73□□□□□ -0.53
TPM3-212ENST00000368533 LRRC31Q6UY01 552 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 MIER3Q7Z3K6 550 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 SLC35F6Q8N357 371 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 CCDC102AQ96A19 550 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 NAP1L4Q99733 375 aaKnown RBP11.73□□□□□ -0.53
TPM3-212ENST00000368533 TEKT3Q9BXF9 490 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 SEMA6BQ9H3T3 888 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 RABGAP1Q9Y3P9 1069 aa11.73□□□□□ -0.53
TPM3-212ENST00000368533 RPA1P27694 616 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 TRAF1Q13077 416 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 UGCGQ16739 394 aa11.72□□□□□ -0.53
TPM3-212ENST00000368533 PLA2G4FQ68DD2 849 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms